| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is gpo [C]
Identifier: 183220205
GI number: 183220205
Start: 814822
End: 815307
Strand: Direct
Name: gpo [C]
Synonym: LEPBI_I0796
Alternate gene names: 183220205
Gene position: 814822-815307 (Clockwise)
Preceding gene: 183220202
Following gene: 183220206
Centisome position: 22.64
GC content: 36.01
Gene sequence:
>486_bases ATGGCGGAAGAATTTTACAATATTAAAGTGAAACGTGGATCGGAAGAGATTCCTATGGAACAATTTAAAGATAAGGTATT GTTGATTGTGAATACCGCAAGTCAGTGTGGCTTCACTCCACAATATAAAGGCCTGCAAGAAACTTATGATCGTTGGAAAG GCAAAGGTTTGGAAATTTTAGCTTTCCCTTGTAACCAGTTCGGAGAACAAGAACCTGGCTCCGATGCAGATATAAAATTG TTTTGTGAAAAAACATTTTCTACAACTTTCCCAATCTTTTCTAAGCTCGAAGTGAACGGTCCAAATACGGATGCACTTTA TATGCATTTAAAAAAGAATGCACCAGGAATTTTTGGTTCTCTTGATATCAAATGGAATTTTACAAAGTTCTTAGTCGATA AAAATGGAAAGGTTGTTAAAAGATATGCACCGATTACAAAACCTGAAGCAATCGAGAAGGATATCGAAAAGCTTGTCCAA GGTTAA
Upstream 100 bases:
>100_bases AATTTTTCAGAATTTGTTTGTATTTTAATCAGAACTTCAAATAAAAAGATTGAACAAAATTAAATTGTGCACAATCTAAT TTACAACAACGGAGAGTAAC
Downstream 100 bases:
>100_bases ATCATCGAAAGAAGAGGTTCTTTTGTTGAAGAACCAAATTTGTTTTTCGATGTATTCCTCAATGCATCGATTGATGAAAC TCTATCGTCCGCTTCTTGCG
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAEEFYNIKVKRGSEEIPMEQFKDKVLLIVNTASQCGFTPQYKGLQETYDRWKGKGLEILAFPCNQFGEQEPGSDADIKL FCEKTFSTTFPIFSKLEVNGPNTDALYMHLKKNAPGIFGSLDIKWNFTKFLVDKNGKVVKRYAPITKPEAIEKDIEKLVQ G
Sequences:
>Translated_161_residues MAEEFYNIKVKRGSEEIPMEQFKDKVLLIVNTASQCGFTPQYKGLQETYDRWKGKGLEILAFPCNQFGEQEPGSDADIKL FCEKTFSTTFPIFSKLEVNGPNTDALYMHLKKNAPGIFGSLDIKWNFTKFLVDKNGKVVKRYAPITKPEAIEKDIEKLVQ G >Mature_160_residues AEEFYNIKVKRGSEEIPMEQFKDKVLLIVNTASQCGFTPQYKGLQETYDRWKGKGLEILAFPCNQFGEQEPGSDADIKLF CEKTFSTTFPIFSKLEVNGPNTDALYMHLKKNAPGIFGSLDIKWNFTKFLVDKNGKVVKRYAPITKPEAIEKDIEKLVQG
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI75709200, Length=142, Percent_Identity=46.4788732394366, Blast_Score=121, Evalue=2e-28, Organism=Homo sapiens, GI90903240, Length=142, Percent_Identity=46.4788732394366, Blast_Score=121, Evalue=3e-28, Organism=Homo sapiens, GI15618997, Length=160, Percent_Identity=36.875, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI192455698, Length=158, Percent_Identity=36.7088607594937, Blast_Score=102, Evalue=1e-22, Organism=Homo sapiens, GI4557629, Length=161, Percent_Identity=34.7826086956522, Blast_Score=91, Evalue=5e-19, Organism=Homo sapiens, GI33186887, Length=169, Percent_Identity=34.3195266272189, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI6006001, Length=162, Percent_Identity=35.8024691358025, Blast_Score=88, Evalue=3e-18, Organism=Homo sapiens, GI90903238, Length=117, Percent_Identity=42.7350427350427, Blast_Score=88, Evalue=3e-18, Organism=Homo sapiens, GI41406084, Length=179, Percent_Identity=31.2849162011173, Blast_Score=81, Evalue=5e-16, Organism=Homo sapiens, GI32967607, Length=185, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1788003, Length=150, Percent_Identity=46, Blast_Score=138, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17535473, Length=158, Percent_Identity=46.8354430379747, Blast_Score=140, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17506887, Length=155, Percent_Identity=45.8064516129032, Blast_Score=133, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71993584, Length=146, Percent_Identity=43.1506849315069, Blast_Score=123, Evalue=5e-29, Organism=Caenorhabditis elegans, GI193210707, Length=161, Percent_Identity=41.6149068322981, Blast_Score=116, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17550320, Length=177, Percent_Identity=29.9435028248588, Blast_Score=88, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193209493, Length=181, Percent_Identity=27.6243093922652, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17507603, Length=113, Percent_Identity=40.7079646017699, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71993573, Length=81, Percent_Identity=37.037037037037, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319721, Length=160, Percent_Identity=51.25, Blast_Score=179, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322228, Length=158, Percent_Identity=51.8987341772152, Blast_Score=172, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322826, Length=158, Percent_Identity=45.5696202531646, Blast_Score=145, Evalue=2e-36, Organism=Drosophila melanogaster, GI24656772, Length=162, Percent_Identity=43.8271604938272, Blast_Score=127, Evalue=4e-30, Organism=Drosophila melanogaster, GI24656767, Length=162, Percent_Identity=43.8271604938272, Blast_Score=127, Evalue=4e-30, Organism=Drosophila melanogaster, GI24656777, Length=162, Percent_Identity=43.8271604938272, Blast_Score=126, Evalue=7e-30, Organism=Drosophila melanogaster, GI85726443, Length=145, Percent_Identity=41.3793103448276, Blast_Score=110, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 18338; Mature: 18207
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00460 GLUTATHIONE_PEROXID_1 ; PS00763 GLUTATHIONE_PEROXID_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEFYNIKVKRGSEEIPMEQFKDKVLLIVNTASQCGFTPQYKGLQETYDRWKGKGLEIL CCCCEEEEEEECCCCCCCHHHCCCEEEEEEECHHHCCCCCCCCCHHHHHHHHCCCCEEEE AFPCNQFGEQEPGSDADIKLFCEKTFSTTFPIFSKLEVNGPNTDALYMHLKKNAPGIFGS EECCHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEE LDIKWNFTKFLVDKNGKVVKRYAPITKPEAIEKDIEKLVQG EEEEECEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AEEFYNIKVKRGSEEIPMEQFKDKVLLIVNTASQCGFTPQYKGLQETYDRWKGKGLEIL CCCEEEEEEECCCCCCCHHHCCCEEEEEEECHHHCCCCCCCCCHHHHHHHHCCCCEEEE AFPCNQFGEQEPGSDADIKLFCEKTFSTTFPIFSKLEVNGPNTDALYMHLKKNAPGIFGS EECCHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEE LDIKWNFTKFLVDKNGKVVKRYAPITKPEAIEKDIEKLVQG EEEEECEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]