Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220199
Identifier: 183220199
GI number: 183220199
Start: 808655
End: 809446
Strand: Reverse
Name: 183220199
Synonym: LEPBI_I0789
Alternate gene names: NA
Gene position: 809446-808655 (Counterclockwise)
Preceding gene: 183220203
Following gene: 183220198
Centisome position: 22.49
GC content: 38.64
Gene sequence:
>792_bases ATGGAAACATCTATCCGTGGATTACGAAAAACCTTACAAGAGATGAAGGAAAACTATTCCTTTGTTTGTGTAAAAACTGG TACTGAAACAGAAGACATGGGAGAAGATGAAATATCTCTCTTAAAAACGATCACATCCGGGATTTTACCACTCTACGTCA AAATCGGCGGTCCAGAAGCAAGAAATGACATCCGTATTTGCCAGAGGATTGCCATATCTGGGATCTCAGCTCCGATGGTG GAATCAGAATATGCCCTAAAAAACTTCATCCAAACGATGAAAAATCTCCTCACTCCCTCTGAATTTGAATCCTACAATAA ATCAATCAATATGGAAACCATTACTGGATACCGCAATTTGATGGATATTTTTGATTCTCCATCTTTCCAAGAGTTGCAAC AAGTAACAGCTGCTAGATCTGATTTGAGTGCCTCTATGGATAAAAAACCTGATGATAAAGAGGTGACACGTGTCGCCAAA AAAATCATCTCTGAGGCAAAAAGCCGAGGAAAAAAAACATCGGTTGGTGGAACCATAACCAAAACTAATTTTGAACTGAT TGCAAACGAAATCCAACCTGATTACATCAACTCAAGACACATCATGGTGGATACCAAAGAAGCCATGAGAATTGGTGCGG CAGATATCGCAGAATGTATGTTAGTTTTTGAAATGGACTTATTCGAGTTTTTTTCCAAATCATTCCCTGAAAAAGGATAC TATTACCGGAACCGAGTGGAAATCAACAGAGAACGGATCGGTGAAAGAAAGGTATTGTATTTCATTCGATAA
Upstream 100 bases:
>100_bases AAGGAATTCGAAATTTCTGTCAAGAAAGGGGGAAAAAAAGCGCAAAAGACTTGTACTATTTTCGGGAATCGACGATACCA TACATGGAGAACTTCTGTTT
Downstream 100 bases:
>100_bases GTGGTTTATTTATTTTTTTTCTCTAGTTTAGTCTCTTCCTTTCTTTTTGTTTCTCCTAAAACCATTCATGCCCCCTTGCA AAAGGGGGTATCTCTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues METSIRGLRKTLQEMKENYSFVCVKTGTETEDMGEDEISLLKTITSGILPLYVKIGGPEARNDIRICQRIAISGISAPMV ESEYALKNFIQTMKNLLTPSEFESYNKSINMETITGYRNLMDIFDSPSFQELQQVTAARSDLSASMDKKPDDKEVTRVAK KIISEAKSRGKKTSVGGTITKTNFELIANEIQPDYINSRHIMVDTKEAMRIGAADIAECMLVFEMDLFEFFSKSFPEKGY YYRNRVEINRERIGERKVLYFIR
Sequences:
>Translated_263_residues METSIRGLRKTLQEMKENYSFVCVKTGTETEDMGEDEISLLKTITSGILPLYVKIGGPEARNDIRICQRIAISGISAPMV ESEYALKNFIQTMKNLLTPSEFESYNKSINMETITGYRNLMDIFDSPSFQELQQVTAARSDLSASMDKKPDDKEVTRVAK KIISEAKSRGKKTSVGGTITKTNFELIANEIQPDYINSRHIMVDTKEAMRIGAADIAECMLVFEMDLFEFFSKSFPEKGY YYRNRVEINRERIGERKVLYFIR >Mature_263_residues METSIRGLRKTLQEMKENYSFVCVKTGTETEDMGEDEISLLKTITSGILPLYVKIGGPEARNDIRICQRIAISGISAPMV ESEYALKNFIQTMKNLLTPSEFESYNKSINMETITGYRNLMDIFDSPSFQELQQVTAARSDLSASMDKKPDDKEVTRVAK KIISEAKSRGKKTSVGGTITKTNFELIANEIQPDYINSRHIMVDTKEAMRIGAADIAECMLVFEMDLFEFFSKSFPEKGY YYRNRVEINRERIGERKVLYFIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30065; Mature: 30065
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSIRGLRKTLQEMKENYSFVCVKTGTETEDMGEDEISLLKTITSGILPLYVKIGGPEA CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCC RNDIRICQRIAISGISAPMVESEYALKNFIQTMKNLLTPSEFESYNKSINMETITGYRNL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHH MDIFDSPSFQELQQVTAARSDLSASMDKKPDDKEVTRVAKKIISEAKSRGKKTSVGGTIT HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE KTNFELIANEIQPDYINSRHIMVDTKEAMRIGAADIAECMLVFEMDLFEFFSKSFPEKGY HHHHHHHHHHCCCCCCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC YYRNRVEINRERIGERKVLYFIR EEHHHEEECHHHCCCEEEEEEEC >Mature Secondary Structure METSIRGLRKTLQEMKENYSFVCVKTGTETEDMGEDEISLLKTITSGILPLYVKIGGPEA CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCC RNDIRICQRIAISGISAPMVESEYALKNFIQTMKNLLTPSEFESYNKSINMETITGYRNL CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHH MDIFDSPSFQELQQVTAARSDLSASMDKKPDDKEVTRVAKKIISEAKSRGKKTSVGGTIT HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEE KTNFELIANEIQPDYINSRHIMVDTKEAMRIGAADIAECMLVFEMDLFEFFSKSFPEKGY HHHHHHHHHHCCCCCCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC YYRNRVEINRERIGERKVLYFIR EEHHHEEECHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA