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The map label for this gene is 183220166

Identifier: 183220166

GI number: 183220166

Start: 771731

End: 772600

Strand: Reverse

Name: 183220166

Synonym: LEPBI_I0754

Alternate gene names: NA

Gene position: 772600-771731 (Counterclockwise)

Preceding gene: 183220167

Following gene: 183220165

Centisome position: 21.46

GC content: 39.66

Gene sequence:

>870_bases
ATGTTTGGTGGTCCCGTTCAATGTGAATTGGTTCTTGATTGTGTAACCAAAATTGGGTTTGCCCAAGGTGTTTTGAATTT
ATTGCGATATTATCCAATAGCAGGATTTGCTTTCTTACTATTCTATGTTTGGCGAAAGGATTTTTTTGAAACCTATCGCA
TCCAAAAACTCTATCCAAAAGCAGAGAAAGTTTGGAAAGAGTTCCGCCAATCAGCTGTTACCTTGCTTGTATTCACACTC
GTTGCTGTCACAAATATCACCTTGATGAAAGCAAAAATTTTTCCAAGTTCCGTTTACTTTGGACCTGTTTCTGGTGTTTG
GGGAATCAGTTATCTATTGATCAGTTTTGTTTTGTTTACTGTTTGGCATGAGACTTGGTTCTATTGGATGCACAGGTTTG
CTCATTTGAAAAAAGTATACCCACACGTGCACTCCGAACACCACCAATCTGTAAATCCTTCACCACTTGCCGCGTATCGT
TTCCAAGCTACCGAAGCTTTTTTAGAGGCGATCTACATTGTTCCGTTTGTGATTTTTGTCCCCGTTCATTTTTACGTCGT
ACTCTTTCAAACTTTCTATGCGATGATTTTGAATATTTGGTGGCATTTAGGGTATGAATTTTTTCCAAAAGGTTGGGCGT
CTCACCCCATTTCCAAATGGATCAATACATCGACACACCACAACCAACACCACCAAAAATTCCAAGGCAACTATTCCTTA
TATTTCAATTTCTGGGACCGTATCATGGGAACGAACTTCCCCAATTACGAAGCCTACTATGATCAAGTGGTGGAAGAAAG
AGAGAGGAAAAAGCGGGAAAAAGGTTTGGTTGGGAAAGAAAAGAATCAGATACTAAGCGTTCAATCCTAG

Upstream 100 bases:

>100_bases
GATTCGGAATCTTTTTTGATTCCGAATGGACCGATTCGGTCGATTCGTTAGACAAAACAGAGTAGAATGACTGAAGTCTA
AAATTGGTCAGGAGATAAAT

Downstream 100 bases:

>100_bases
ATTTTTTCTTGTCATGCGGACATTTCTTCTTTCCTATTGGAAGGATGTCCGAACTTGTTCCAGGAATTTATGATCGGATC
ATTGACTTAGAATTAGCTGA

Product: putative sterol desaturase family protein

Products: NA

Alternate protein names: Fatty Acid Hydroxylase; Sterol Desaturase; C-5 Sterol Desaturase; Sterol Desaturase Superfamily; Desaturase

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MFGGPVQCELVLDCVTKIGFAQGVLNLLRYYPIAGFAFLLFYVWRKDFFETYRIQKLYPKAEKVWKEFRQSAVTLLVFTL
VAVTNITLMKAKIFPSSVYFGPVSGVWGISYLLISFVLFTVWHETWFYWMHRFAHLKKVYPHVHSEHHQSVNPSPLAAYR
FQATEAFLEAIYIVPFVIFVPVHFYVVLFQTFYAMILNIWWHLGYEFFPKGWASHPISKWINTSTHHNQHHQKFQGNYSL
YFNFWDRIMGTNFPNYEAYYDQVVEERERKKREKGLVGKEKNQILSVQS

Sequences:

>Translated_289_residues
MFGGPVQCELVLDCVTKIGFAQGVLNLLRYYPIAGFAFLLFYVWRKDFFETYRIQKLYPKAEKVWKEFRQSAVTLLVFTL
VAVTNITLMKAKIFPSSVYFGPVSGVWGISYLLISFVLFTVWHETWFYWMHRFAHLKKVYPHVHSEHHQSVNPSPLAAYR
FQATEAFLEAIYIVPFVIFVPVHFYVVLFQTFYAMILNIWWHLGYEFFPKGWASHPISKWINTSTHHNQHHQKFQGNYSL
YFNFWDRIMGTNFPNYEAYYDQVVEERERKKREKGLVGKEKNQILSVQS
>Mature_289_residues
MFGGPVQCELVLDCVTKIGFAQGVLNLLRYYPIAGFAFLLFYVWRKDFFETYRIQKLYPKAEKVWKEFRQSAVTLLVFTL
VAVTNITLMKAKIFPSSVYFGPVSGVWGISYLLISFVLFTVWHETWFYWMHRFAHLKKVYPHVHSEHHQSVNPSPLAAYR
FQATEAFLEAIYIVPFVIFVPVHFYVVLFQTFYAMILNIWWHLGYEFFPKGWASHPISKWINTSTHHNQHHQKFQGNYSL
YFNFWDRIMGTNFPNYEAYYDQVVEERERKKREKGLVGKEKNQILSVQS

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI68160945, Length=188, Percent_Identity=31.3829787234043, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI68160941, Length=188, Percent_Identity=31.3829787234043, Blast_Score=79, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34378; Mature: 34378

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC
>Mature Secondary Structure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EHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA