| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220061
Identifier: 183220061
GI number: 183220061
Start: 653692
End: 654411
Strand: Reverse
Name: 183220061
Synonym: LEPBI_I0648
Alternate gene names: NA
Gene position: 654411-653692 (Counterclockwise)
Preceding gene: 183220066
Following gene: 183220060
Centisome position: 18.18
GC content: 41.39
Gene sequence:
>720_bases TTGGATGGTATGCTCCGATTGATTTCCATTTTTTTGGTCCTTTCTTCTTTTTTTTGGGGCTGTGGTCTCAAAAATGAAAA CAAAGCAGAAGTCTCGATTTTTCCCGATGGGGAACCATCGCTCTACTTCTTAGGAGAGGTCGATAGCGATATCACAACAA GCTGTGGACAAGCGACTCCGGCAACTGCGTCAACCGGAACCACAGGCACAACACCTGGATCAACCGGTTCTACTGGGTCA ACTACGAATAACACTCGCTTCACGGTCATCTCACAACTTATTTTTAAAACCAAAGAGACTCTCAATTTACGGTTCACATA CGACAGCACACAAATCCAAGGGAAAATTGACCCACAACAAGGTTTTGTCCTTGCGGGAGGATTATTTGGTAAAACTGTGC AAGGAACCCAAGGGACTGTCGAATGGTTCAACCAAGGGATCAATATTGACACTGCTTTACAAAGTGCCCAACAAATCTCC TTCTTCAATTTAGAAATCACATTGAATGGAACTTATAGTACATCTGCTTCCTCTACGACAAACATTCTCAATTCTTGTAA TACTTTGGATGGTGTGAATTGTACTTCAGGAACATCAACAACGCAGTGTTTTACAAACGACAATCGAACTTGTTTGGTTC AAAATACTACCAGTGATGCAAAATCAGTGATCATTCGTGGAACATTGAAATGTAATGCTCCGAATATTGTCCCACAATAA
Upstream 100 bases:
>100_bases TAGACCAAATGGGAGCCGCATTTGTCAATCTTAGATTTTCCACCAAATTTCCCAAGGAAATTCTGAATCCTCTTGACCCA ATAAGGAATTCCTAGGACGG
Downstream 100 bases:
>100_bases ATAATCGATTGTTTCCTTAGATTTGCTTCGCCTTGTTGTAAGTCTCGTCTGTTTTCCCTTTCTGTTATGGGCAGAAGGGG AACAAAAATTAGTCCATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATPATASTGTTGTTPGSTGSTGS TTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQGFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQIS FFNLEITLNGTYSTSASSTTNILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ
Sequences:
>Translated_239_residues MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATPATASTGTTGTTPGSTGSTGS TTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQGFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQIS FFNLEITLNGTYSTSASSTTNILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ >Mature_239_residues MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATPATASTGTTGTTPGSTGSTGS TTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQGFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQIS FFNLEITLNGTYSTSASSTTNILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25448; Mature: 25448
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATP CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHCCCCCCCC ATASTGTTGTTPGSTGSTGSTTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCCC GFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQISFFNLEITLNGTYSTSASSTT CEEEECCCCCCEECCCCCHHHHHHCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHH NILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ HHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCC >Mature Secondary Structure MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATP CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHCCCCCCCC ATASTGTTGTTPGSTGSTGSTTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQ CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCCC GFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQISFFNLEITLNGTYSTSASSTT CEEEECCCCCCEECCCCCHHHHHHCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHH NILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ HHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA