Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183220061

Identifier: 183220061

GI number: 183220061

Start: 653692

End: 654411

Strand: Reverse

Name: 183220061

Synonym: LEPBI_I0648

Alternate gene names: NA

Gene position: 654411-653692 (Counterclockwise)

Preceding gene: 183220066

Following gene: 183220060

Centisome position: 18.18

GC content: 41.39

Gene sequence:

>720_bases
TTGGATGGTATGCTCCGATTGATTTCCATTTTTTTGGTCCTTTCTTCTTTTTTTTGGGGCTGTGGTCTCAAAAATGAAAA
CAAAGCAGAAGTCTCGATTTTTCCCGATGGGGAACCATCGCTCTACTTCTTAGGAGAGGTCGATAGCGATATCACAACAA
GCTGTGGACAAGCGACTCCGGCAACTGCGTCAACCGGAACCACAGGCACAACACCTGGATCAACCGGTTCTACTGGGTCA
ACTACGAATAACACTCGCTTCACGGTCATCTCACAACTTATTTTTAAAACCAAAGAGACTCTCAATTTACGGTTCACATA
CGACAGCACACAAATCCAAGGGAAAATTGACCCACAACAAGGTTTTGTCCTTGCGGGAGGATTATTTGGTAAAACTGTGC
AAGGAACCCAAGGGACTGTCGAATGGTTCAACCAAGGGATCAATATTGACACTGCTTTACAAAGTGCCCAACAAATCTCC
TTCTTCAATTTAGAAATCACATTGAATGGAACTTATAGTACATCTGCTTCCTCTACGACAAACATTCTCAATTCTTGTAA
TACTTTGGATGGTGTGAATTGTACTTCAGGAACATCAACAACGCAGTGTTTTACAAACGACAATCGAACTTGTTTGGTTC
AAAATACTACCAGTGATGCAAAATCAGTGATCATTCGTGGAACATTGAAATGTAATGCTCCGAATATTGTCCCACAATAA

Upstream 100 bases:

>100_bases
TAGACCAAATGGGAGCCGCATTTGTCAATCTTAGATTTTCCACCAAATTTCCCAAGGAAATTCTGAATCCTCTTGACCCA
ATAAGGAATTCCTAGGACGG

Downstream 100 bases:

>100_bases
ATAATCGATTGTTTCCTTAGATTTGCTTCGCCTTGTTGTAAGTCTCGTCTGTTTTCCCTTTCTGTTATGGGCAGAAGGGG
AACAAAAATTAGTCCATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATPATASTGTTGTTPGSTGSTGS
TTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQGFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQIS
FFNLEITLNGTYSTSASSTTNILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ

Sequences:

>Translated_239_residues
MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATPATASTGTTGTTPGSTGSTGS
TTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQGFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQIS
FFNLEITLNGTYSTSASSTTNILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ
>Mature_239_residues
MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATPATASTGTTGTTPGSTGSTGS
TTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQGFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQIS
FFNLEITLNGTYSTSASSTTNILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25448; Mature: 25448

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHCCCCCCCC
ATASTGTTGTTPGSTGSTGSTTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCCC
GFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQISFFNLEITLNGTYSTSASSTT
CEEEECCCCCCEECCCCCHHHHHHCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHH
NILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ
HHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MDGMLRLISIFLVLSSFFWGCGLKNENKAEVSIFPDGEPSLYFLGEVDSDITTSCGQATP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHCCCCCCCC
ATASTGTTGTTPGSTGSTGSTTNNTRFTVISQLIFKTKETLNLRFTYDSTQIQGKIDPQQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEEEECCCC
GFVLAGGLFGKTVQGTQGTVEWFNQGINIDTALQSAQQISFFNLEITLNGTYSTSASSTT
CEEEECCCCCCEECCCCCHHHHHHCCCCHHHHHHHHHCEEEEEEEEEECCCCCCCCCHHH
NILNSCNTLDGVNCTSGTSTTQCFTNDNRTCLVQNTTSDAKSVIIRGTLKCNAPNIVPQ
HHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA