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The map label for this gene is yjmB [H]

Identifier: 183220009

GI number: 183220009

Start: 592312

End: 593697

Strand: Reverse

Name: yjmB [H]

Synonym: LEPBI_I0592

Alternate gene names: 183220009

Gene position: 593697-592312 (Counterclockwise)

Preceding gene: 183220010

Following gene: 183220008

Centisome position: 16.49

GC content: 38.6

Gene sequence:

>1386_bases
ATGAACCATTCTAAACTCAAAACTCCCGTCAAAATGGGTTATGGATTTGCCGAAACTGGCATAACAGCCGTTCAACTTTT
CACTCAGATTTATCTCCTCAAATTCTACACTGAAATTGTTGGTTTAAACGCAAGTTTGGCTGGTATTGCATTGTCCATTT
CCGTGATTTGGGATGCAATCAGCGATCCACTGATGGGTAGGATTTCCGATCATACGAGGACAAGGTTTGGTAGAAGACGT
CCTTATATTTTCATTGGTGGCATCTTATTATCCATTGCAGTTCTCCTACTCTTTTCCCCACCAGAAATTGCCTCACAATT
AGGTAAGTTCATTTACCTACTCAGTGTTTATCTTTTAGTCAATACAGCAATGACCATTATCTCAGTTCCTCATATCGCAC
TCGGTGGTGAACTGAGCTTTGAACGAGATGAACGAACATCGGTATTTGGTTGGAGATTGTTTTTTAGTAATATCGGAATG
TTAATCGGGATGATTGTTCCCGCAGCTATCTTACAATCACTAGGTGATGAAACGGCAAAAGAAAACATCATCACATCTCG
CACTGTTGCCGGTGAAATTGTATCACTTGTGATTTTAGTCTCTTCCATTATCACTTTTTGGGTGACAAAAGGAAAAGACA
AAATCCAAACTGATCGATCAAAACAACTTCCGTTCTTTATCTCATTTGGCTCTGTATTAAAAAACAAAATGTTTTTAGTT
TTGTTATTTGCTTTTGTCATCGCAACCATCGGCAGAACCTTTAATTCCGCAATTGCACTCTATTATTATGAATACCGATT
GGGTTTAAAAGAATCCCAAGTGGTCATCAATATCCTTTTGCCATTTTTTCTCGTGCTGATGTTATCCATTGGATTCTGGG
TTTGGATCTCAAAAAAAATTGGGAAAAAAATCCCTGCATTCTTTGGAGTTTTTGGATTAGGACTCCTTACCGTCATAGTG
TATCCTTTGTTTCCTTATGGTGAACTCAGGCCTCCTCTCATCGCTGCTTTTTTTGGAGGAATCTTTGCTGGTTCCATATT
GATCATGGATTCCATTCTCACTGATGTGGTTGACTACGATGAATTCCAAACAGGCGAAAAGCGAGAGGGGTTATACTTTG
GTATTTGGAAAATGGGTGTGAAATTCTCTCAAGCCTTCGGAATTGCCATCACAGGTTTTTTACTCGATATCATTGGATTT
CAAAATGGAATGACAACACAAACACCAGAAGTTGGATTCAGACTGGCTCTCATCTTTGGACCTGGTGTGGGTTTTTTCTT
TATTTTTGGTTCCATCATCTTTTTGTTTTTTCCATTAACGGATGCAAAACACATCCAAGTCCAACGAATCTTGACAAAAA
GAACATTGAAAAAGGAAACTAGGTAA

Upstream 100 bases:

>100_bases
CATCTTAAAAAATGATTCAAATCCTTCGACCGTTTCCCACTAAACTTCAATTTATTTCCCAATTGGTAAGGTTCGAACCG
TCCAATACTTGGAAACATGA

Downstream 100 bases:

>100_bases
GTAAGATTTGAATCCCATGGTGCCAAAACAAAGACTTCAATTCCTAGCCTTCTTACTCATTTATTTTATTGTCCCATTCT
CTGCCTGTTTCTTCACTTTA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MNHSKLKTPVKMGYGFAETGITAVQLFTQIYLLKFYTEIVGLNASLAGIALSISVIWDAISDPLMGRISDHTRTRFGRRR
PYIFIGGILLSIAVLLLFSPPEIASQLGKFIYLLSVYLLVNTAMTIISVPHIALGGELSFERDERTSVFGWRLFFSNIGM
LIGMIVPAAILQSLGDETAKENIITSRTVAGEIVSLVILVSSIITFWVTKGKDKIQTDRSKQLPFFISFGSVLKNKMFLV
LLFAFVIATIGRTFNSAIALYYYEYRLGLKESQVVINILLPFFLVLMLSIGFWVWISKKIGKKIPAFFGVFGLGLLTVIV
YPLFPYGELRPPLIAAFFGGIFAGSILIMDSILTDVVDYDEFQTGEKREGLYFGIWKMGVKFSQAFGIAITGFLLDIIGF
QNGMTTQTPEVGFRLALIFGPGVGFFFIFGSIIFLFFPLTDAKHIQVQRILTKRTLKKETR

Sequences:

>Translated_461_residues
MNHSKLKTPVKMGYGFAETGITAVQLFTQIYLLKFYTEIVGLNASLAGIALSISVIWDAISDPLMGRISDHTRTRFGRRR
PYIFIGGILLSIAVLLLFSPPEIASQLGKFIYLLSVYLLVNTAMTIISVPHIALGGELSFERDERTSVFGWRLFFSNIGM
LIGMIVPAAILQSLGDETAKENIITSRTVAGEIVSLVILVSSIITFWVTKGKDKIQTDRSKQLPFFISFGSVLKNKMFLV
LLFAFVIATIGRTFNSAIALYYYEYRLGLKESQVVINILLPFFLVLMLSIGFWVWISKKIGKKIPAFFGVFGLGLLTVIV
YPLFPYGELRPPLIAAFFGGIFAGSILIMDSILTDVVDYDEFQTGEKREGLYFGIWKMGVKFSQAFGIAITGFLLDIIGF
QNGMTTQTPEVGFRLALIFGPGVGFFFIFGSIIFLFFPLTDAKHIQVQRILTKRTLKKETR
>Mature_461_residues
MNHSKLKTPVKMGYGFAETGITAVQLFTQIYLLKFYTEIVGLNASLAGIALSISVIWDAISDPLMGRISDHTRTRFGRRR
PYIFIGGILLSIAVLLLFSPPEIASQLGKFIYLLSVYLLVNTAMTIISVPHIALGGELSFERDERTSVFGWRLFFSNIGM
LIGMIVPAAILQSLGDETAKENIITSRTVAGEIVSLVILVSSIITFWVTKGKDKIQTDRSKQLPFFISFGSVLKNKMFLV
LLFAFVIATIGRTFNSAIALYYYEYRLGLKESQVVINILLPFFLVLMLSIGFWVWISKKIGKKIPAFFGVFGLGLLTVIV
YPLFPYGELRPPLIAAFFGGIFAGSILIMDSILTDVVDYDEFQTGEKREGLYFGIWKMGVKFSQAFGIAITGFLLDIIGF
QNGMTTQTPEVGFRLALIFGPGVGFFFIFGSIIFLFFPLTDAKHIQVQRILTKRTLKKETR

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI42713696, Length=474, Percent_Identity=23.8396624472574, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI211063479, Length=483, Percent_Identity=24.0165631469979, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI122937339, Length=429, Percent_Identity=23.5431235431235, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1786466, Length=468, Percent_Identity=26.9230769230769, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1790561, Length=464, Percent_Identity=23.4913793103448, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87082306, Length=414, Percent_Identity=22.9468599033816, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787902, Length=470, Percent_Identity=23.8297872340426, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI145693206, Length=429, Percent_Identity=23.7762237762238, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI48994989, Length=448, Percent_Identity=23.8839285714286, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 51446; Mature: 51446

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHSKLKTPVKMGYGFAETGITAVQLFTQIYLLKFYTEIVGLNASLAGIALSISVIWDAI
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SDPLMGRISDHTRTRFGRRRPYIFIGGILLSIAVLLLFSPPEIASQLGKFIYLLSVYLLV
CCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NTAMTIISVPHIALGGELSFERDERTSVFGWRLFFSNIGMLIGMIVPAAILQSLGDETAK
HHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ENIITSRTVAGEIVSLVILVSSIITFWVTKGKDKIQTDRSKQLPFFISFGSVLKNKMFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHH
LLFAFVIATIGRTFNSAIALYYYEYRLGLKESQVVINILLPFFLVLMLSIGFWVWISKKI
HHHHHHHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKKIPAFFGVFGLGLLTVIVYPLFPYGELRPPLIAAFFGGIFAGSILIMDSILTDVVDYD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EFQTGEKREGLYFGIWKMGVKFSQAFGIAITGFLLDIIGFQNGMTTQTPEVGFRLALIFG
HCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
PGVGFFFIFGSIIFLFFPLTDAKHIQVQRILTKRTLKKETR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHSKLKTPVKMGYGFAETGITAVQLFTQIYLLKFYTEIVGLNASLAGIALSISVIWDAI
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
SDPLMGRISDHTRTRFGRRRPYIFIGGILLSIAVLLLFSPPEIASQLGKFIYLLSVYLLV
CCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NTAMTIISVPHIALGGELSFERDERTSVFGWRLFFSNIGMLIGMIVPAAILQSLGDETAK
HHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ENIITSRTVAGEIVSLVILVSSIITFWVTKGKDKIQTDRSKQLPFFISFGSVLKNKMFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHH
LLFAFVIATIGRTFNSAIALYYYEYRLGLKESQVVINILLPFFLVLMLSIGFWVWISKKI
HHHHHHHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKKIPAFFGVFGLGLLTVIVYPLFPYGELRPPLIAAFFGGIFAGSILIMDSILTDVVDYD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EFQTGEKREGLYFGIWKMGVKFSQAFGIAITGFLLDIIGFQNGMTTQTPEVGFRLALIFG
HCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEE
PGVGFFFIFGSIIFLFFPLTDAKHIQVQRILTKRTLKKETR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]