| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219993
Identifier: 183219993
GI number: 183219993
Start: 576549
End: 577967
Strand: Reverse
Name: 183219993
Synonym: LEPBI_I0575
Alternate gene names: NA
Gene position: 577967-576549 (Counterclockwise)
Preceding gene: 183219994
Following gene: 183219992
Centisome position: 16.06
GC content: 36.58
Gene sequence:
>1419_bases ATGAACGTTTATTATAAAATGGGTATCTACCTATCACTTCTCTTTGTGACTTCGATTCTATCGGAAGAAACAAAAATGGC CCAAGCAAGTGAGGCACTGAGGAGACAATTAACGGATGAAAATCCAAGGACATCTCTCGGATCCAGTTTGTATCCAGATG ACCAAAAGTTTTCTAAAGACATCGATTTGGAAACCGCCGAAACATTATTATGGAAGAACAACTTACTTCTCATCGCTTCA CGATTCCAAATTGATGTTAAAAAAGCTGGTATCTTACAAGCAGGGTTATACGCAAACCCAAACATCGCCATCGACCAGAG TATTTTTGCGGAACCGACGCAGAGGTATTTTGATACGACAAGGTCCGGTCAATCTGTAATCCAAGTACAACAAGTCTTTT TGTTAGGCGGAAAAATCGATAAACGAGTCAAAGTAGCCGAACTAAATGCAAAAATCTCCGAACAAGAATTTTATGATTTA ACGAGAGCTCTCATCACAAAACTCCGAAGAACATTTTATACAATCTACTTTTATAAAAAGGCTGTTGTATTTTATGACCA AAGTATTGCATCTATTGAAAAAACTGTAGAATCGTCTGAACTTGCTTATAAAAGAAGGGCATTACTACAGGCAGAACACC TTCGCTTAAAAGCCCTTCTCTTCTTCCTAAAAAAAGAAAGAGAAGATTTGGCTATCAAGGTATATGAAAAAGAAGCCGAA CTTAAAATTTTGTTAAACGATGATGCCTATCGAGATGCACGTGTTGAATTTGCTCCCAAAATCAATGAAAAACAATTGGA CTCGATTGTTCCAAATAATGTGAAACTGGAAGAACTCGTCGAAATAGCACGTGAAAACAGACCTGACTTAAAAAAAGCCT TACAAACATTACGTTATGAAGAAGCGAATCTAGAACTACAATATGCTAATGCGATTCCTGATTTATCATTTGGTCCTGTA TACAACAGGGGTGGAACTGCGTTTCAAAATTATTGGGGTGTCACTGCTCAATTAACGGTCCCTTTATTTGATCGTAACCA AGGGAATATCCAAGCAGCTGAAAAAGCAATTTTGGTTCGAAAACAAGAATTAAAGAATAATATCTTGGAAGTAGAAAATG AGGTAGCAGTTGCTTACCAATCCGCACGTATCAAAGATGCTTTATACAAACGATTCATAGATGCATATATTAAAGATTAT AGTAGTTTATCTTTAGATATGATTATGAGTTATGAAAAGAAATACATCACCATCTTAGAGTTTGCCGACTTCTTTGAAAC CTATCGCTCCAGTGTAGTGGAAATGTTAAAACTCCAAACGGATCGAATGGAAGCCATTGAAAATGTAAATTATGCCGTTG GTAAGGGAATCTTTATCCCTAAATCCGAAAACCAAACTACTCCAAAATCCGAGGAATAA
Upstream 100 bases:
>100_bases CTTTTTCGGCATCTAGAATCCGGAAGTATAAGCTCACCTAACAAGGTAGAGGTATACCCATATTCGATGCACCCTTATGT TTTTTAAAATTTGGTAACTT
Downstream 100 bases:
>100_bases AATGTTCATTACCTTAAAATCATTAAACCAAAAAGCAAGAATCCTACTACTCTCTGGAGTTGTATTAATCGTAGCCGCGA TTTTGTTTTTGGTGTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cation Efflux System Protein CzcC; Outer Membrane Protein; Cation Efflux-Related Outer Membrane Exported Protein; Heavy Metal Efflux Pump; Outer Membrane Protein lC; Cation Efflux System Protein; Heavy Metal Resistance Protein; LC-Related Efflux Protein; LC Outer Membrane Protein
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MNVYYKMGIYLSLLFVTSILSEETKMAQASEALRRQLTDENPRTSLGSSLYPDDQKFSKDIDLETAETLLWKNNLLLIAS RFQIDVKKAGILQAGLYANPNIAIDQSIFAEPTQRYFDTTRSGQSVIQVQQVFLLGGKIDKRVKVAELNAKISEQEFYDL TRALITKLRRTFYTIYFYKKAVVFYDQSIASIEKTVESSELAYKRRALLQAEHLRLKALLFFLKKEREDLAIKVYEKEAE LKILLNDDAYRDARVEFAPKINEKQLDSIVPNNVKLEELVEIARENRPDLKKALQTLRYEEANLELQYANAIPDLSFGPV YNRGGTAFQNYWGVTAQLTVPLFDRNQGNIQAAEKAILVRKQELKNNILEVENEVAVAYQSARIKDALYKRFIDAYIKDY SSLSLDMIMSYEKKYITILEFADFFETYRSSVVEMLKLQTDRMEAIENVNYAVGKGIFIPKSENQTTPKSEE
Sequences:
>Translated_472_residues MNVYYKMGIYLSLLFVTSILSEETKMAQASEALRRQLTDENPRTSLGSSLYPDDQKFSKDIDLETAETLLWKNNLLLIAS RFQIDVKKAGILQAGLYANPNIAIDQSIFAEPTQRYFDTTRSGQSVIQVQQVFLLGGKIDKRVKVAELNAKISEQEFYDL TRALITKLRRTFYTIYFYKKAVVFYDQSIASIEKTVESSELAYKRRALLQAEHLRLKALLFFLKKEREDLAIKVYEKEAE LKILLNDDAYRDARVEFAPKINEKQLDSIVPNNVKLEELVEIARENRPDLKKALQTLRYEEANLELQYANAIPDLSFGPV YNRGGTAFQNYWGVTAQLTVPLFDRNQGNIQAAEKAILVRKQELKNNILEVENEVAVAYQSARIKDALYKRFIDAYIKDY SSLSLDMIMSYEKKYITILEFADFFETYRSSVVEMLKLQTDRMEAIENVNYAVGKGIFIPKSENQTTPKSEE >Mature_472_residues MNVYYKMGIYLSLLFVTSILSEETKMAQASEALRRQLTDENPRTSLGSSLYPDDQKFSKDIDLETAETLLWKNNLLLIAS RFQIDVKKAGILQAGLYANPNIAIDQSIFAEPTQRYFDTTRSGQSVIQVQQVFLLGGKIDKRVKVAELNAKISEQEFYDL TRALITKLRRTFYTIYFYKKAVVFYDQSIASIEKTVESSELAYKRRALLQAEHLRLKALLFFLKKEREDLAIKVYEKEAE LKILLNDDAYRDARVEFAPKINEKQLDSIVPNNVKLEELVEIARENRPDLKKALQTLRYEEANLELQYANAIPDLSFGPV YNRGGTAFQNYWGVTAQLTVPLFDRNQGNIQAAEKAILVRKQELKNNILEVENEVAVAYQSARIKDALYKRFIDAYIKDY SSLSLDMIMSYEKKYITILEFADFFETYRSSVVEMLKLQTDRMEAIENVNYAVGKGIFIPKSENQTTPKSEE
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54429; Mature: 54429
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVYYKMGIYLSLLFVTSILSEETKMAQASEALRRQLTDENPRTSLGSSLYPDDQKFSKD CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHCCC IDLETAETLLWKNNLLLIASRFQIDVKKAGILQAGLYANPNIAIDQSIFAEPTQRYFDTT CCCHHHHHHHCCCCEEEEEEEEEEEHHHCCCEEECCCCCCCCEECHHHHCCHHHHHHHCC RSGQSVIQVQQVFLLGGKIDKRVKVAELNAKISEQEFYDLTRALITKLRRTFYTIYFYKK CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVFYDQSIASIEKTVESSELAYKRRALLQAEHLRLKALLFFLKKEREDLAIKVYEKEAE HHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC LKILLNDDAYRDARVEFAPKINEKQLDSIVPNNVKLEELVEIARENRPDLKKALQTLRYE EEEEECCCCCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EANLELQYANAIPDLSFGPVYNRGGTAFQNYWGVTAQLTVPLFDRNQGNIQAAEKAILVR HCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHH KQELKNNILEVENEVAVAYQSARIKDALYKRFIDAYIKDYSSLSLDMIMSYEKKYITILE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHH FADFFETYRSSVVEMLKLQTDRMEAIENVNYAVGKGIFIPKSENQTTPKSEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MNVYYKMGIYLSLLFVTSILSEETKMAQASEALRRQLTDENPRTSLGSSLYPDDQKFSKD CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHCCC IDLETAETLLWKNNLLLIASRFQIDVKKAGILQAGLYANPNIAIDQSIFAEPTQRYFDTT CCCHHHHHHHCCCCEEEEEEEEEEEHHHCCCEEECCCCCCCCEECHHHHCCHHHHHHHCC RSGQSVIQVQQVFLLGGKIDKRVKVAELNAKISEQEFYDLTRALITKLRRTFYTIYFYKK CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVVFYDQSIASIEKTVESSELAYKRRALLQAEHLRLKALLFFLKKEREDLAIKVYEKEAE HHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC LKILLNDDAYRDARVEFAPKINEKQLDSIVPNNVKLEELVEIARENRPDLKKALQTLRYE EEEEECCCCCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH EANLELQYANAIPDLSFGPVYNRGGTAFQNYWGVTAQLTVPLFDRNQGNIQAAEKAILVR HCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHH KQELKNNILEVENEVAVAYQSARIKDALYKRFIDAYIKDYSSLSLDMIMSYEKKYITILE HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHH FADFFETYRSSVVEMLKLQTDRMEAIENVNYAVGKGIFIPKSENQTTPKSEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA