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The map label for this gene is ylcD [C]

Identifier: 183219992

GI number: 183219992

Start: 575540

End: 576547

Strand: Reverse

Name: ylcD [C]

Synonym: LEPBI_I0574

Alternate gene names: 183219992

Gene position: 576547-575540 (Counterclockwise)

Preceding gene: 183219993

Following gene: 183219991

Centisome position: 16.02

GC content: 37.6

Gene sequence:

>1008_bases
ATGTTCATTACCTTAAAATCATTAAACCAAAAAGCAAGAATCCTACTACTCTCTGGAGTTGTATTAATCGTAGCCGCGAT
TTTGTTTTTGGTGTTTTCAAAATCTACAAAACCTATTCACAAACATCCAGAAAAAGCGGAAGTATTTGACGAAGGTTTAC
GAATCGTTTTTAAACCCAATAGTCCAGGGCTTGAGATCGTTAGGTCCACTGTGATTGGCGGCGGAGGAGAGTTTGTCAGT
TTAGAAGCTCCTGCAAGGCTAATTGCATCTACTTCACCATCTGTAAGCAACGGATCAAGGATCATACTCTTTGAATCAGC
AGAGTTAAACGACTTATATGTGGGTTACATTCACGCTAAAAACAAACTCCATCGTTCCAATAAAAACTTAAGTCGTATCA
AAGATATGTTTGTTCATCGTGTTGCAACAGAAAAAGATTTAGTAGAATCAGAAACTGATTCAGGTAATGATGCAGCAGAA
CTTGCAGAATTTGAGGGTAAACTTCGAGCACAAGGATTAAACCCAAGCGAACTGAGCACAGCAGGAAGTTTGAAAGCTTG
GATCATCACGGATGTTCCCGAATCTCAAATTTCTACATTAAAAAAAGGTAAAAAAGTAAAAGTAGTTTTTGCTTCTTTTC
CAGATGAAGAATTTACAGGAACTGCTGAAGCAATTGGTGATAACGTAGATCCACTCACAAGAACAGCAAAGATGCGTATT
ATCGTTGTGAATGATAAGTATCGTTTGAAACCAGGGATGTTTGGAGTTGTAAAATTTCCAGAACAAACAGGTGGTGATAG
TGTTGTTTTACCTTATACGGCAATTGTCACAGTCGAAGGGAAAAACTATGTATTTGTCGAAGAAAAGCCATTAACATTCA
AAAGGCGAGAAGTGGTTCTTGGTATTTCAACAAAAGAACGTGTGAACATCATTGAAGGTCTAGCACCTGGCGAAAAAGTA
GCAATCCAAGGTTCCATTTTGTTAAAAGGATTAAGTTTTGGTTTCTAA

Upstream 100 bases:

>100_bases
GATCGAATGGAAGCCATTGAAAATGTAAATTATGCCGTTGGTAAGGGAATCTTTATCCCTAAATCCGAAAACCAAACTAC
TCCAAAATCCGAGGAATAAA

Downstream 100 bases:

>100_bases
AATGAAAAATTTGATCTTAAGCATTTTAATTCTTTTCATTACGGGATCAAGTTTATACTCTCAAACTTCTCCTTTTCCTA
AAGATAAAAACGGGAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Cation Efflux System Protein; Cation Efflux System Protein CzcB; HlyD Family Secretion Protein; Cation Efflux Protein; Efflux Transporter Rnd Family Mfp Subunit; Heavy Metal Efflux System Protein; Metal Transport-Related Exported Protein; RND Efflux Membrane Fusion Protein; Chemiosmotic Efflux System C Protein B; Cobalt-Zinc-Cadmium Resistance Protein; Secretion Protein HlyD Family Protein; Membrane-Fusion Protein; HlyD Family Heavy Metal Efflux Pump; Membrane Fusion Protein; HlyD Family-Like Protein; Cation Efflux System Transmembrane Protein; CzcB Family Heavy Metal Efflux Protein; CzcB Family Heavy Metal RND Efflux Membrane Fusion Protein; Heavy Metal Efflux Transporter RND Family MFP Subunit; Heavy Metal Resistance Protein Czcb; Acriflavine Resistance Protein A; AcrA-Related Membrane Protein; Chemiosmotic Efflux System B Protein B; Heavy Metal Efflux Pump; Cation Efflux System Protein CusB; Heavy Metal Cation Tricomponent Efflux Protein ZniB; RND Family Heavy Metal Efflux Transporter MFP Subunit; Cation Eflux System Protein; Cation Efflux-Related Lipoprotein; Heavy Metal Efflux System Membrane Fusion Protein; Heavy Metal Efflux Pump Czcb Family; Cation/Multidrug Efflux System Mebrane-Fusion Component; Efflux System Protein; Heavy Metal Cation Tricomponent Efflux Protein HmxB; Cobalt-Zinc-Cadmium Resistance Protein CzcB; Copper/Silver Efflux System Protein Cusb; Heavy Metal Resistance Protein CzcB; Membrane-Fusion Protein RND-Like Efflux System Component; HlyD-Family Secretion Protein; Cobalt-Zinc-Cadmium Resistance Membrane-Fusion Protein; RND Family Efflux Pump Membrane Fusion Protein; Co/Zn/Cd Efflux System Membrane Fusion Protein; Chemiosmotic Efflux System Protein B-Like Protein; Auxiliary Transport Protein MFP Family; Cation Efflux System Membrane Protein; Efflux Transporter; Cation Transporter Transmembrane Protein; Cd(II)/Pb(II)-Responsive Transcriptional Regulator; Heavy Metal RND Efflux Membrane Fusion Protein; RND-Type Efflux Transporter Membrane Fusion Protein; Copper/Silver Efflux System Protein CusB; Multidrug Efflux Pump; RND Efflux Membrane-Fusionprotein; Nickel-Cobalt Resistance Protein; RND Family Efflux Transporter; Membrane-Fusion Protein-Like Protein; Copper Efflux System Protein

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MFITLKSLNQKARILLLSGVVLIVAAILFLVFSKSTKPIHKHPEKAEVFDEGLRIVFKPNSPGLEIVRSTVIGGGGEFVS
LEAPARLIASTSPSVSNGSRIILFESAELNDLYVGYIHAKNKLHRSNKNLSRIKDMFVHRVATEKDLVESETDSGNDAAE
LAEFEGKLRAQGLNPSELSTAGSLKAWIITDVPESQISTLKKGKKVKVVFASFPDEEFTGTAEAIGDNVDPLTRTAKMRI
IVVNDKYRLKPGMFGVVKFPEQTGGDSVVLPYTAIVTVEGKNYVFVEEKPLTFKRREVVLGISTKERVNIIEGLAPGEKV
AIQGSILLKGLSFGF

Sequences:

>Translated_335_residues
MFITLKSLNQKARILLLSGVVLIVAAILFLVFSKSTKPIHKHPEKAEVFDEGLRIVFKPNSPGLEIVRSTVIGGGGEFVS
LEAPARLIASTSPSVSNGSRIILFESAELNDLYVGYIHAKNKLHRSNKNLSRIKDMFVHRVATEKDLVESETDSGNDAAE
LAEFEGKLRAQGLNPSELSTAGSLKAWIITDVPESQISTLKKGKKVKVVFASFPDEEFTGTAEAIGDNVDPLTRTAKMRI
IVVNDKYRLKPGMFGVVKFPEQTGGDSVVLPYTAIVTVEGKNYVFVEEKPLTFKRREVVLGISTKERVNIIEGLAPGEKV
AIQGSILLKGLSFGF
>Mature_335_residues
MFITLKSLNQKARILLLSGVVLIVAAILFLVFSKSTKPIHKHPEKAEVFDEGLRIVFKPNSPGLEIVRSTVIGGGGEFVS
LEAPARLIASTSPSVSNGSRIILFESAELNDLYVGYIHAKNKLHRSNKNLSRIKDMFVHRVATEKDLVESETDSGNDAAE
LAEFEGKLRAQGLNPSELSTAGSLKAWIITDVPESQISTLKKGKKVKVVFASFPDEEFTGTAEAIGDNVDPLTRTAKMRI
IVVNDKYRLKPGMFGVVKFPEQTGGDSVVLPYTAIVTVEGKNYVFVEEKPLTFKRREVVLGISTKERVNIIEGLAPGEKV
AIQGSILLKGLSFGF

Specific function: Possible component of copper transport system [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36569; Mature: 36569

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITLKSLNQKARILLLSGVVLIVAAILFLVFSKSTKPIHKHPEKAEVFDEGLRIVFKPN
CEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHCCCCEEEECCC
SPGLEIVRSTVIGGGGEFVSLEAPARLIASTSPSVSNGSRIILFESAELNDLYVGYIHAK
CCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEEEC
NKLHRSNKNLSRIKDMFVHRVATEKDLVESETDSGNDAAELAEFEGKLRAQGLNPSELST
CHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHCCHHEECCCCHHHHCC
AGSLKAWIITDVPESQISTLKKGKKVKVVFASFPDEEFTGTAEAIGDNVDPLTRTAKMRI
CCCEEEEEEECCCHHHHHHHHCCCEEEEEEEECCCHHCCCCHHHHCCCCCCCCCEEEEEE
IVVNDKYRLKPGMFGVVKFPEQTGGDSVVLPYTAIVTVEGKNYVFVEEKPLTFKRREVVL
EEECCCEEECCCEEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEE
GISTKERVNIIEGLAPGEKVAIQGSILLKGLSFGF
ECCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC
>Mature Secondary Structure
MFITLKSLNQKARILLLSGVVLIVAAILFLVFSKSTKPIHKHPEKAEVFDEGLRIVFKPN
CEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHCCCCEEEECCC
SPGLEIVRSTVIGGGGEFVSLEAPARLIASTSPSVSNGSRIILFESAELNDLYVGYIHAK
CCCHHHHHHHHCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEEEC
NKLHRSNKNLSRIKDMFVHRVATEKDLVESETDSGNDAAELAEFEGKLRAQGLNPSELST
CHHHHCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHCCHHEECCCCHHHHCC
AGSLKAWIITDVPESQISTLKKGKKVKVVFASFPDEEFTGTAEAIGDNVDPLTRTAKMRI
CCCEEEEEEECCCHHHHHHHHCCCEEEEEEEECCCHHCCCCHHHHCCCCCCCCCEEEEEE
IVVNDKYRLKPGMFGVVKFPEQTGGDSVVLPYTAIVTVEGKNYVFVEEKPLTFKRREVVL
EEECCCEEECCCEEEEEECCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEE
GISTKERVNIIEGLAPGEKVAIQGSILLKGLSFGF
ECCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA