| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219917
Identifier: 183219917
GI number: 183219917
Start: 495546
End: 496739
Strand: Reverse
Name: 183219917
Synonym: LEPBI_I0499
Alternate gene names: NA
Gene position: 496739-495546 (Counterclockwise)
Preceding gene: 183219918
Following gene: 183219916
Centisome position: 13.8
GC content: 39.53
Gene sequence:
>1194_bases ATGGATACAATTCCTACAAACAAAGGCCCCCATTGGATACTCCTTCTTTCTATGTTTCTTGTTTTCCAATGTAGCCAATT GGAAATAAAAAAACCAAGTTTATTCCAATTTTTATTTTTATCAGCATCACCCACGTCTGTTGGCGTTGTCACATCTGATT TTGCAAGCGGAGGAAGATTTAAAACCTTCGAACCCAATTCCTTTACAGCATTTCCCACCTCCATCCCCATCCATTCCGAT GCAGTGGGAAGGTATTCGAATGATCGAGTTTTTATCGTAAACCGATTGAATCGTGATTCTATCCAAGTATTGAACCCTCA GTTCGGATTTCTCACCGAACAAGAGTTTAGTGTTGGTCAAGGAAAAAATCCGCAAGACATTGCCGTTTGGAATGATAAAT ACTTTATTAGTTTGTACAATGCAGATGAGTTAGTGATTTATAGCAGGAGTTCTGGTATCAAAATTGGTGCTGTCTCCTTT TCTTCTCTTCGGGAAACCTTTTCAACTTCTGGAATTCCTGACTCGTCAGTGGAATCATCCTATATGATACAAGACGGATC GAGTTTGTTTGTTTTACTGCAAAGGTTAGACCGTAATGATGCCTCAGGGTATTTACCACCTAATTCTGATTCTTATTTGG TGGAAGTGGATATGGATCTGAATCAAATCCGAAACATTTATACACTGCCCTATAGAAACCCAAGCTCCAAAATCCAAAAA GTATTTTTATTTGGAGAACCACATTTGGTTTTTTCATGTGTCGGTCGGGTTGGGTTTATCTCTCAAATTGATGCAGGGAT CATTGCATTTCGTTTGAGTACAAGGCAGTTTCATCCCAACCGTTTGTATGAAGAAAGTGTCGCTGGTGGGGATATACTCT CCTTTCAAATCAAAAATGAAGATTTTGGATACGCCTCCGTTTTGGATGCAGGTTTTAATAAAACCATCCAAGTCTTTCGC CCAAGGACAGGCGAAAAACTAGCTACACTTTTGCAAATCCCAGGCAATATTGGAATCAGTTTATCAGGAATGTTACTCAC AAGTGAAGGGAAATTACTCGTTGGTTCAACAGATTTCACAAGGCCTGGAATTTATGTCTATGATACGAACATCGGAAACG TTTTACTCAACCCCATTCCCAGTTCTGTGGAGTTGACACCTTTTGACATCTTCCAGTTGCAAAATCTTCCGTAA
Upstream 100 bases:
>100_bases GATTTGAAGTGCGAAACGTAACAGACAAACGTGTAGAAGATTTGGTGGGTTACCCGTTACCGGGCCGTAGTTATTATCTG ACTGGGAGTTATCGATTCTA
Downstream 100 bases:
>100_bases ATTTCAAAATGGAAAAAGACAGGGGAATCTAATTTATGTTAACTCTTAAAAAACATCCAAACGGTCCGCTTACCAAACAA GTTTTACTCATCGTTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MDTIPTNKGPHWILLLSMFLVFQCSQLEIKKPSLFQFLFLSASPTSVGVVTSDFASGGRFKTFEPNSFTAFPTSIPIHSD AVGRYSNDRVFIVNRLNRDSIQVLNPQFGFLTEQEFSVGQGKNPQDIAVWNDKYFISLYNADELVIYSRSSGIKIGAVSF SSLRETFSTSGIPDSSVESSYMIQDGSSLFVLLQRLDRNDASGYLPPNSDSYLVEVDMDLNQIRNIYTLPYRNPSSKIQK VFLFGEPHLVFSCVGRVGFISQIDAGIIAFRLSTRQFHPNRLYEESVAGGDILSFQIKNEDFGYASVLDAGFNKTIQVFR PRTGEKLATLLQIPGNIGISLSGMLLTSEGKLLVGSTDFTRPGIYVYDTNIGNVLLNPIPSSVELTPFDIFQLQNLP
Sequences:
>Translated_397_residues MDTIPTNKGPHWILLLSMFLVFQCSQLEIKKPSLFQFLFLSASPTSVGVVTSDFASGGRFKTFEPNSFTAFPTSIPIHSD AVGRYSNDRVFIVNRLNRDSIQVLNPQFGFLTEQEFSVGQGKNPQDIAVWNDKYFISLYNADELVIYSRSSGIKIGAVSF SSLRETFSTSGIPDSSVESSYMIQDGSSLFVLLQRLDRNDASGYLPPNSDSYLVEVDMDLNQIRNIYTLPYRNPSSKIQK VFLFGEPHLVFSCVGRVGFISQIDAGIIAFRLSTRQFHPNRLYEESVAGGDILSFQIKNEDFGYASVLDAGFNKTIQVFR PRTGEKLATLLQIPGNIGISLSGMLLTSEGKLLVGSTDFTRPGIYVYDTNIGNVLLNPIPSSVELTPFDIFQLQNLP >Mature_397_residues MDTIPTNKGPHWILLLSMFLVFQCSQLEIKKPSLFQFLFLSASPTSVGVVTSDFASGGRFKTFEPNSFTAFPTSIPIHSD AVGRYSNDRVFIVNRLNRDSIQVLNPQFGFLTEQEFSVGQGKNPQDIAVWNDKYFISLYNADELVIYSRSSGIKIGAVSF SSLRETFSTSGIPDSSVESSYMIQDGSSLFVLLQRLDRNDASGYLPPNSDSYLVEVDMDLNQIRNIYTLPYRNPSSKIQK VFLFGEPHLVFSCVGRVGFISQIDAGIIAFRLSTRQFHPNRLYEESVAGGDILSFQIKNEDFGYASVLDAGFNKTIQVFR PRTGEKLATLLQIPGNIGISLSGMLLTSEGKLLVGSTDFTRPGIYVYDTNIGNVLLNPIPSSVELTPFDIFQLQNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44112; Mature: 44112
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIPTNKGPHWILLLSMFLVFQCSQLEIKKPSLFQFLFLSASPTSVGVVTSDFASGGRF CCCCCCCCCCHHHHHHHHHHHEECCCCEECCCCEEEEEEEECCCCEEEEEEECCCCCCEE KTFEPNSFTAFPTSIPIHSDAVGRYSNDRVFIVNRLNRDSIQVLNPQFGFLTEQEFSVGQ EEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEECCCCCCCC GKNPQDIAVWNDKYFISLYNADELVIYSRSSGIKIGAVSFSSLRETFSTSGIPDSSVESS CCCCCEEEEECCEEEEEEECCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCE YMIQDGSSLFVLLQRLDRNDASGYLPPNSDSYLVEVDMDLNQIRNIYTLPYRNPSSKIQK EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHCCCEEEECCCCCCHHEEE VFLFGEPHLVFSCVGRVGFISQIDAGIIAFRLSTRQFHPNRLYEESVAGGDILSFQIKNE EEEECCCCHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCC DFGYASVLDAGFNKTIQVFRPRTGEKLATLLQIPGNIGISLSGMLLTSEGKLLVGSTDFT CCCCHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCEEEECCCCC RPGIYVYDTNIGNVLLNPIPSSVELTPFDIFQLQNLP CCCEEEEECCCCCEEECCCCCCEEECEEEEEEECCCC >Mature Secondary Structure MDTIPTNKGPHWILLLSMFLVFQCSQLEIKKPSLFQFLFLSASPTSVGVVTSDFASGGRF CCCCCCCCCCHHHHHHHHHHHEECCCCEECCCCEEEEEEEECCCCEEEEEEECCCCCCEE KTFEPNSFTAFPTSIPIHSDAVGRYSNDRVFIVNRLNRDSIQVLNPQFGFLTEQEFSVGQ EEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCEECCCCCCCC GKNPQDIAVWNDKYFISLYNADELVIYSRSSGIKIGAVSFSSLRETFSTSGIPDSSVESS CCCCCEEEEECCEEEEEEECCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCE YMIQDGSSLFVLLQRLDRNDASGYLPPNSDSYLVEVDMDLNQIRNIYTLPYRNPSSKIQK EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHCCCEEEECCCCCCHHEEE VFLFGEPHLVFSCVGRVGFISQIDAGIIAFRLSTRQFHPNRLYEESVAGGDILSFQIKNE EEEECCCCHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEECCC DFGYASVLDAGFNKTIQVFRPRTGEKLATLLQIPGNIGISLSGMLLTSEGKLLVGSTDFT CCCCHHHHHCCCCCEEEEECCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCEEEECCCCC RPGIYVYDTNIGNVLLNPIPSSVELTPFDIFQLQNLP CCCEEEEECCCCCEEECCCCCCEEECEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA