Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183219914

Identifier: 183219914

GI number: 183219914

Start: 491412

End: 491750

Strand: Reverse

Name: 183219914

Synonym: LEPBI_I0496

Alternate gene names: NA

Gene position: 491750-491412 (Counterclockwise)

Preceding gene: 183219915

Following gene: 183219912

Centisome position: 13.66

GC content: 38.35

Gene sequence:

>339_bases
ATGGAATATACAGAATCTAAATCTAACGGAATTGTAGTCCTTAAATTGTTTGGCAACTTAGATATGTTAAATGCCGGCAT
TTTGAAAGAAAGGATCAAAGAATCTGCGTCCCAATCCGAACATCGATTTATTTTTGACTTAGAAGGAGTCAGTTTCATCG
ACTCTTCTGGATTTGGGCTCATCATGTCCCTCAACGACAAACTAACAGAATTAGGTGGTGGACTCAGGATTGTGAATGTA
TCCAAAACCATCCGCCAGATCTTCCGCATCTCTAAAATTTCTTCCGTCATTCAAATTTTTGAATCAACGGAAGAAGCCAT
CCAGTCCTTTTTACCTTAA

Upstream 100 bases:

>100_bases
GGAGGATCCTCCGGACCATTTCTGTAGATGAAAAATGGGATAAGTTTGTGAATTAATCTATTGACCAAATTTTTAAATTG
GCTATTCTCTAAGCGATTCG

Downstream 100 bases:

>100_bases
ATCTTAAAAAGGTCCTTAACCAACAATCATCTCATTTGCATTAGGTGACCGATGTTGTGACCATTTTTTTCCAAAAGTTT
TTTAGTTTCAATAATTTGGG

Product: putative anti-sigma-B factor antagonist

Products: NA

Alternate protein names: Anti-Sigma-Factor Antagonist; Anti-Sigma-B Factor Antagonist

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MEYTESKSNGIVVLKLFGNLDMLNAGILKERIKESASQSEHRFIFDLEGVSFIDSSGFGLIMSLNDKLTELGGGLRIVNV
SKTIRQIFRISKISSVIQIFESTEEAIQSFLP

Sequences:

>Translated_112_residues
MEYTESKSNGIVVLKLFGNLDMLNAGILKERIKESASQSEHRFIFDLEGVSFIDSSGFGLIMSLNDKLTELGGGLRIVNV
SKTIRQIFRISKISSVIQIFESTEEAIQSFLP
>Mature_112_residues
MEYTESKSNGIVVLKLFGNLDMLNAGILKERIKESASQSEHRFIFDLEGVSFIDSSGFGLIMSLNDKLTELGGGLRIVNV
SKTIRQIFRISKISSVIQIFESTEEAIQSFLP

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12474; Mature: 12474

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYTESKSNGIVVLKLFGNLDMLNAGILKERIKESASQSEHRFIFDLEGVSFIDSSGFGL
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCEE
IMSLNDKLTELGGGLRIVNVSKTIRQIFRISKISSVIQIFESTEEAIQSFLP
EEECCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYTESKSNGIVVLKLFGNLDMLNAGILKERIKESASQSEHRFIFDLEGVSFIDSSGFGL
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCEE
IMSLNDKLTELGGGLRIVNVSKTIRQIFRISKISSVIQIFESTEEAIQSFLP
EEECCHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA