| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183219906
Identifier: 183219906
GI number: 183219906
Start: 482500
End: 483168
Strand: Reverse
Name: 183219906
Synonym: LEPBI_I0488
Alternate gene names: NA
Gene position: 483168-482500 (Counterclockwise)
Preceding gene: 183219908
Following gene: 183219905
Centisome position: 13.42
GC content: 35.28
Gene sequence:
>669_bases ATGTCCAAAAATATAGTAGAAAGGTATCTCGTTCTCAAAAATAAATATAGGAATTATGATACGAAGTATGCCCTCAAACG AATGCAAGCGTTCCGACTGGCAACACAAGAACTTTCCCGAAAAGGGTACGAAGTAGCGTTAGAACTACTCGGTTCCATCA ATTTTGGAATCGTAGACCCAACATCGGATGTAGACTGTATTTTGTTATTAGAATGTGATCTTCACAAAGACCAAGGCAAT TGCCCTCATCATTGTAACAATCTAACATTCGTAAAAACCGAAATCTCTAAATTTGTTACAAAACGATTAGCACCAGAATC GTTTAACATAGATTATTTAGATTGTATCAATCTAAAATATGTTGAAGAAAAAATTCGAACCGAATCCGTTTTAGGTGATG AAACACTTTTTTGTTTATTATTCTATCGTAATATAGGTAGACCAGTCAACCGTCCACTTTTCATTCCGTTTTGTGATCAG TTAGAAGAAAATCATGATTTCGTAAAAGAAATCATTCCTTGGGCATCCGAAGCATTAGAAGGATACTTAAACACCAACCA ACATCGGATGTCATTTAATAAATACAATGAAAGGATCCGAGCGCGGGGTTTAAGTTTACCTGAAGGATTACAACAAGAAT TACAAGCATACATGGAAGGAAAGTCATAA
Upstream 100 bases:
>100_bases ATCGGCGAAATTTCAATTTTCCCAATACAAAAGGTGTTGTATTCTTTGGGCAAATGGCGTTCACTACAATTCAAATCCAA ACGCCATTATATAAAAACAT
Downstream 100 bases:
>100_bases TGAAAAAGAAGTCTTCGTGGTAACAGCCTTAGATTTTGAAAACAATCAAAATTGTGTTTCAAAAATGATTGATCTATGGA TTTATCAATGAACTGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSKNIVERYLVLKNKYRNYDTKYALKRMQAFRLATQELSRKGYEVALELLGSINFGIVDPTSDVDCILLLECDLHKDQGN CPHHCNNLTFVKTEISKFVTKRLAPESFNIDYLDCINLKYVEEKIRTESVLGDETLFCLLFYRNIGRPVNRPLFIPFCDQ LEENHDFVKEIIPWASEALEGYLNTNQHRMSFNKYNERIRARGLSLPEGLQQELQAYMEGKS
Sequences:
>Translated_222_residues MSKNIVERYLVLKNKYRNYDTKYALKRMQAFRLATQELSRKGYEVALELLGSINFGIVDPTSDVDCILLLECDLHKDQGN CPHHCNNLTFVKTEISKFVTKRLAPESFNIDYLDCINLKYVEEKIRTESVLGDETLFCLLFYRNIGRPVNRPLFIPFCDQ LEENHDFVKEIIPWASEALEGYLNTNQHRMSFNKYNERIRARGLSLPEGLQQELQAYMEGKS >Mature_221_residues SKNIVERYLVLKNKYRNYDTKYALKRMQAFRLATQELSRKGYEVALELLGSINFGIVDPTSDVDCILLLECDLHKDQGNC PHHCNNLTFVKTEISKFVTKRLAPESFNIDYLDCINLKYVEEKIRTESVLGDETLFCLLFYRNIGRPVNRPLFIPFCDQL EENHDFVKEIIPWASEALEGYLNTNQHRMSFNKYNERIRARGLSLPEGLQQELQAYMEGKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25944; Mature: 25813
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNIVERYLVLKNKYRNYDTKYALKRMQAFRLATQELSRKGYEVALELLGSINFGIVDP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC TSDVDCILLLECDLHKDQGNCPHHCNNLTFVKTEISKFVTKRLAPESFNIDYLDCINLKY CCCCCEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHCCHHH VEEKIRTESVLGDETLFCLLFYRNIGRPVNRPLFIPFCDQLEENHDFVKEIIPWASEALE HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEECCCHHHHHCCHHHHHHHHHHHHHHHH GYLNTNQHRMSFNKYNERIRARGLSLPEGLQQELQAYMEGKS HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SKNIVERYLVLKNKYRNYDTKYALKRMQAFRLATQELSRKGYEVALELLGSINFGIVDP CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECC TSDVDCILLLECDLHKDQGNCPHHCNNLTFVKTEISKFVTKRLAPESFNIDYLDCINLKY CCCCCEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCHHHHCCHHH VEEKIRTESVLGDETLFCLLFYRNIGRPVNRPLFIPFCDQLEENHDFVKEIIPWASEALE HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEECCCHHHHHCCHHHHHHHHHHHHHHHH GYLNTNQHRMSFNKYNERIRARGLSLPEGLQQELQAYMEGKS HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA