| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219588
Identifier: 183219588
GI number: 183219588
Start: 159644
End: 160858
Strand: Reverse
Name: 183219588
Synonym: LEPBI_I0163
Alternate gene names: NA
Gene position: 160858-159644 (Counterclockwise)
Preceding gene: 183219590
Following gene: 183219587
Centisome position: 4.47
GC content: 42.47
Gene sequence:
>1215_bases GTGACCTCATCTGGAAAGGAACCATCGAATACAAATGTTACAAACCCAAATCCGACAACCACAGGGACTGTCACTGCGCC ATCCGAAAACAAATCCAATTGGGAAACGGGTCTTGGGAAAGGGATCCGTGGGACTTCAAATGACGGGAAACACAATATCC AACTTCGGTTTCGATCCCAACTGCAAGGGAACCAAAGTTTCCAAATTGATCCATCCCAAGACACAACCAACTTCCTTGTA AGAAGGACAAGACTCCAATTGAAGGCGGGCCTTTTCAACGATACCTGGCTTGTGAACTTACAATTGGGTTTTGCAGAACG GGATATGGAAAGCCAAAGGCGTAATACCTTACGGGATGCCAATATCATCTACAACCAATACCGCGATGTAAAAGTTGCTT TTGGACAAATGAAAATTCCATTTAGCAGGCAACGTTGGAATTCATCGAGTGCCTTACAAACGGTGGATCGGTCTTCGGTC ACTGCTGAATTTAACTTAGATCGTGATGTGGGAGCTTACCTTTTTTCAGAGGATCTATTTGGCAGCAAACGAATGTTTGC TTATTATTTAGGAGTTTTTGGTGGCCAAGGCCGTAACCGAGTCGAAAGACAAACTCCAGGTGTTTTGACTGTTGCTCGAT TGACCTTTTCTCCTTTTGGTGGGATGTCAAAATCAGGTTCGGATAATGATTGGTTGTCTGAGGTTGATTTTGCTCGTTAC AAAGATCCAAAAATTTCCTTCGGTGTCTCAGGAGCTTATAACAAAAACTCAGACAGAGCTTTGAGTACACATGGTACTGA ATATAGTTTTGCAAAATTCAACTATAGTCATGCGGCAGGTGATATTTATTTCAAATGGATGGGATTCTCCTTTCAATATG AATGGTTGTGGCGTAGAGCAAACACGGCTTATGTGGAAAGAACCGTAAGTTCTGCACTTTCGAGAGAATATTCTCGAAGT GGGCAAGGCCATTTTGTCCAACTTGGGTATTTGTTTACCAACCAATATGAATTAGTGGTTCGATTTGGTGAATTTAGGCC ACTCGGAGAAACTGATCCCAATTTGAAGTATTCTCGTGAAGTGGGAGGAGCCTTGTCCTATTATTTTGCCGAACACAATC TCAAGTGGCAAACCGATTATTTTTATTATACCGGTACCCCAACCGCTGCAGAAGGGGATCATGTAGTCCGAACTCAAATA CAGGTATTTTATTAA
Upstream 100 bases:
>100_bases GGCAATTGCCCTATCTTTCTCCACATTTCCCCTGATTTCCCAAGAGAAACCAGAGGCCTCCAAAGACCAACAACCACCCA AGGTTGCTGAAACAAAGGAG
Downstream 100 bases:
>100_bases AATGAAACGATTCATTCTTTTTTTTCCATTATTCTTTTTCATTACAATTCTTTTCCATTGCCAAGCGCAACGAGAAGATA AAATCAAAGAAACTCAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphate-Selective Porin; Porin P; Phosphate-Selective Porin O And P Superfamily
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTSSGKEPSNTNVTNPNPTTTGTVTAPSENKSNWETGLGKGIRGTSNDGKHNIQLRFRSQLQGNQSFQIDPSQDTTNFLV RRTRLQLKAGLFNDTWLVNLQLGFAERDMESQRRNTLRDANIIYNQYRDVKVAFGQMKIPFSRQRWNSSSALQTVDRSSV TAEFNLDRDVGAYLFSEDLFGSKRMFAYYLGVFGGQGRNRVERQTPGVLTVARLTFSPFGGMSKSGSDNDWLSEVDFARY KDPKISFGVSGAYNKNSDRALSTHGTEYSFAKFNYSHAAGDIYFKWMGFSFQYEWLWRRANTAYVERTVSSALSREYSRS GQGHFVQLGYLFTNQYELVVRFGEFRPLGETDPNLKYSREVGGALSYYFAEHNLKWQTDYFYYTGTPTAAEGDHVVRTQI QVFY
Sequences:
>Translated_404_residues MTSSGKEPSNTNVTNPNPTTTGTVTAPSENKSNWETGLGKGIRGTSNDGKHNIQLRFRSQLQGNQSFQIDPSQDTTNFLV RRTRLQLKAGLFNDTWLVNLQLGFAERDMESQRRNTLRDANIIYNQYRDVKVAFGQMKIPFSRQRWNSSSALQTVDRSSV TAEFNLDRDVGAYLFSEDLFGSKRMFAYYLGVFGGQGRNRVERQTPGVLTVARLTFSPFGGMSKSGSDNDWLSEVDFARY KDPKISFGVSGAYNKNSDRALSTHGTEYSFAKFNYSHAAGDIYFKWMGFSFQYEWLWRRANTAYVERTVSSALSREYSRS GQGHFVQLGYLFTNQYELVVRFGEFRPLGETDPNLKYSREVGGALSYYFAEHNLKWQTDYFYYTGTPTAAEGDHVVRTQI QVFY >Mature_403_residues TSSGKEPSNTNVTNPNPTTTGTVTAPSENKSNWETGLGKGIRGTSNDGKHNIQLRFRSQLQGNQSFQIDPSQDTTNFLVR RTRLQLKAGLFNDTWLVNLQLGFAERDMESQRRNTLRDANIIYNQYRDVKVAFGQMKIPFSRQRWNSSSALQTVDRSSVT AEFNLDRDVGAYLFSEDLFGSKRMFAYYLGVFGGQGRNRVERQTPGVLTVARLTFSPFGGMSKSGSDNDWLSEVDFARYK DPKISFGVSGAYNKNSDRALSTHGTEYSFAKFNYSHAAGDIYFKWMGFSFQYEWLWRRANTAYVERTVSSALSREYSRSG QGHFVQLGYLFTNQYELVVRFGEFRPLGETDPNLKYSREVGGALSYYFAEHNLKWQTDYFYYTGTPTAAEGDHVVRTQIQ VFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46095; Mature: 45963
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSGKEPSNTNVTNPNPTTTGTVTAPSENKSNWETGLGKGIRGTSNDGKHNIQLRFRSQ CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEC LQGNQSFQIDPSQDTTNFLVRRTRLQLKAGLFNDTWLVNLQLGFAERDMESQRRNTLRDA CCCCCEEEECCCCCHHHHHHHHHHHHEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH NIIYNQYRDVKVAFGQMKIPFSRQRWNSSSALQTVDRSSVTAEFNLDRDVGAYLFSEDLF HHHHHCCCCEEEEECEEECCCHHHCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHC GSKRMFAYYLGVFGGQGRNRVERQTPGVLTVARLTFSPFGGMSKSGSDNDWLSEVDFARY CCHHHEEHEEHHHCCCCCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHCCHHHC KDPKISFGVSGAYNKNSDRALSTHGTEYSFAKFNYSHAAGDIYFKWMGFSFQYEWLWRRA CCCCEEEECCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEEEECC NTAYVERTVSSALSREYSRSGQGHFVQLGYLFTNQYELVVRFGEFRPLGETDPNLKYSRE CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCEEHHH VGGALSYYFAEHNLKWQTDYFYYTGTPTAAEGDHVVRTQIQVFY HCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure TSSGKEPSNTNVTNPNPTTTGTVTAPSENKSNWETGLGKGIRGTSNDGKHNIQLRFRSQ CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEC LQGNQSFQIDPSQDTTNFLVRRTRLQLKAGLFNDTWLVNLQLGFAERDMESQRRNTLRDA CCCCCEEEECCCCCHHHHHHHHHHHHEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH NIIYNQYRDVKVAFGQMKIPFSRQRWNSSSALQTVDRSSVTAEFNLDRDVGAYLFSEDLF HHHHHCCCCEEEEECEEECCCHHHCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHC GSKRMFAYYLGVFGGQGRNRVERQTPGVLTVARLTFSPFGGMSKSGSDNDWLSEVDFARY CCHHHEEHEEHHHCCCCCCCHHHCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHCCHHHC KDPKISFGVSGAYNKNSDRALSTHGTEYSFAKFNYSHAAGDIYFKWMGFSFQYEWLWRRA CCCCEEEECCCCCCCCCCCEEECCCCEEEEEEEECCCCCCCEEEEEECCEEEEEEEEECC NTAYVERTVSSALSREYSRSGQGHFVQLGYLFTNQYELVVRFGEFRPLGETDPNLKYSRE CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEECCCCCCCCCCCCCEEHHH VGGALSYYFAEHNLKWQTDYFYYTGTPTAAEGDHVVRTQIQVFY HCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA