Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183219587

Identifier: 183219587

GI number: 183219587

Start: 159118

End: 159642

Strand: Reverse

Name: 183219587

Synonym: LEPBI_I0162

Alternate gene names: NA

Gene position: 159642-159118 (Counterclockwise)

Preceding gene: 183219588

Following gene: 183219584

Centisome position: 4.43

GC content: 37.71

Gene sequence:

>525_bases
ATGAAACGATTCATTCTTTTTTTTCCATTATTCTTTTTCATTACAATTCTTTTCCATTGCCAAGCGCAACGAGAAGATAA
AATCAAAGAAACTCAAAACCAATGTTTACAAACTATGTACCTTGCAAGTTTGAATGCGGGAAGAACTGGTTTTAGTGGTA
GTTTCCAATTTTTAGGATCTTGTTCAGGTTCTTCCAATTATAGTCCGTCTTGCATCGAATCTTATGCAGTTGTCAAAGAA
GATCTGACTTGTGCACCAGGGTATACTAAATCAAGCTCCAAATGTTCGACACAAAACCTAATTGGAGTTTGTCGCTACCA
ACCCAATGGGGATACCACGAAGGTAAATACGATCGTTTACGTGAAACCCAATGATACCAAAGAGTTTGCCATGACGGATT
GCCAGAACAAAGCAGTTGGATCCATTTTTACAGAAACCTATCTGAATCCAACGGACCGTGTTACCTCTATCGATACCATT
CTAACCAATGCTTATGTATGCATCGATAAAGCACAAAAAAATTGA

Upstream 100 bases:

>100_bases
AATCTCAAGTGGCAAACCGATTATTTTTATTATACCGGTACCCCAACCGCTGCAGAAGGGGATCATGTAGTCCGAACTCA
AATACAGGTATTTTATTAAA

Downstream 100 bases:

>100_bases
TCCGATTGGCAAGATTGAAAATAGATATTTTTCATTCTACCAAACGAATCACCTAAACCATGTGATACGGCCTATTTCCT
TCAAAACAATCCTTCGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKRFILFFPLFFFITILFHCQAQREDKIKETQNQCLQTMYLASLNAGRTGFSGSFQFLGSCSGSSNYSPSCIESYAVVKE
DLTCAPGYTKSSSKCSTQNLIGVCRYQPNGDTTKVNTIVYVKPNDTKEFAMTDCQNKAVGSIFTETYLNPTDRVTSIDTI
LTNAYVCIDKAQKN

Sequences:

>Translated_174_residues
MKRFILFFPLFFFITILFHCQAQREDKIKETQNQCLQTMYLASLNAGRTGFSGSFQFLGSCSGSSNYSPSCIESYAVVKE
DLTCAPGYTKSSSKCSTQNLIGVCRYQPNGDTTKVNTIVYVKPNDTKEFAMTDCQNKAVGSIFTETYLNPTDRVTSIDTI
LTNAYVCIDKAQKN
>Mature_174_residues
MKRFILFFPLFFFITILFHCQAQREDKIKETQNQCLQTMYLASLNAGRTGFSGSFQFLGSCSGSSNYSPSCIESYAVVKE
DLTCAPGYTKSSSKCSTQNLIGVCRYQPNGDTTKVNTIVYVKPNDTKEFAMTDCQNKAVGSIFTETYLNPTDRVTSIDTI
LTNAYVCIDKAQKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19430; Mature: 19430

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFILFFPLFFFITILFHCQAQREDKIKETQNQCLQTMYLASLNAGRTGFSGSFQFLGS
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
CSGSSNYSPSCIESYAVVKEDLTCAPGYTKSSSKCSTQNLIGVCRYQPNGDTTKVNTIVY
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE
VKPNDTKEFAMTDCQNKAVGSIFTETYLNPTDRVTSIDTILTNAYVCIDKAQKN
ECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure
MKRFILFFPLFFFITILFHCQAQREDKIKETQNQCLQTMYLASLNAGRTGFSGSFQFLGS
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
CSGSSNYSPSCIESYAVVKEDLTCAPGYTKSSSKCSTQNLIGVCRYQPNGDTTKVNTIVY
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEE
VKPNDTKEFAMTDCQNKAVGSIFTETYLNPTDRVTSIDTILTNAYVCIDKAQKN
ECCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA