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The map label for this gene is yvrC [H]

Identifier: 183219575

GI number: 183219575

Start: 144650

End: 145426

Strand: Reverse

Name: yvrC [H]

Synonym: LEPBI_I0150

Alternate gene names: 183219575

Gene position: 145426-144650 (Counterclockwise)

Preceding gene: 183219576

Following gene: 183219574

Centisome position: 4.04

GC content: 46.07

Gene sequence:

>777_bases
ATGGGTCCAAAAAGAATCATTTGTCTCACAGAAGAACCAACGGAGATGATTTATCTCTTGGGGGAAGAAAAACGGATTGT
GGGGATTTCTGTTTATACAGAACGACCTGTCCGTGCCAAAGAAGAAAAAACAAAGGTCTCAGCGTTTATCAGTGGGAATC
TCAAAAAAATACTCTCACTGGAACCAGACTTAGTCATCGGTTTTTCAGACATCCAAGGCCAACTTGCCAAAGACCTCATT
GAACGTGGGTTAAATGTGCTCATCTTCAACCAACGTTCCATCGCTGAAATCATCACCAATATGCAAATCATTGGAAACAT
TGTGGGCCAATCCGAAAAAGCCAAAAACATCACTGATGGTTGGAAACACCAAATCCAAACCTGGCAAAAACAAAATGAAT
CCATTTCCAAAAGACCCACCGTGTTTTTCCAGGAATGGGACGAACCCATCATCACGGGGATCCAATGGGTGAGCGAAGCG
GTCGCTCTGGCAGGTGGGATCGACTGTTTTTCCCATCTCAAAGACCGTAAACTCGCCAAAGACCGCATCATCCAAGCGGA
GGATGTGAGGGAGGCCAACCCTGACATCTACGTAGGTTCTTGGTGTGGGAAGGCGATGGACTGGGACTGGGTCCGGAACA
AACCCGAGTGGCAGTCGACTGGCTTTCTCCAAAACAACCGAATTTATGAAATGGACCCAAGCATTATATTACAACCGGGC
CCTGCCCTGTTTTTAGAAGGGATTCCGAAACTCAGAGAGTTCTTTTTGACAGCTTAA

Upstream 100 bases:

>100_bases
GGAATCCCACACGGGAGTACGGTTCTCAGAGAAGAAGATATTGTGGTTTTGTTTGGATCTCAATCCGATCTTTCCAAATT
TTTAGAAACTTAAAAAAACC

Downstream 100 bases:

>100_bases
TTACTCTCTTTGTCATCCATCTGTCATCTAAATGTAACAGAGATCCACTAGATTTGAAACATATCAATTAGATATGGAGA
CATTCATGAACGTTTCATGT

Product: putative high affinity Fe3+ transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGPKRIICLTEEPTEMIYLLGEEKRIVGISVYTERPVRAKEEKTKVSAFISGNLKKILSLEPDLVIGFSDIQGQLAKDLI
ERGLNVLIFNQRSIAEIITNMQIIGNIVGQSEKAKNITDGWKHQIQTWQKQNESISKRPTVFFQEWDEPIITGIQWVSEA
VALAGGIDCFSHLKDRKLAKDRIIQAEDVREANPDIYVGSWCGKAMDWDWVRNKPEWQSTGFLQNNRIYEMDPSIILQPG
PALFLEGIPKLREFFLTA

Sequences:

>Translated_258_residues
MGPKRIICLTEEPTEMIYLLGEEKRIVGISVYTERPVRAKEEKTKVSAFISGNLKKILSLEPDLVIGFSDIQGQLAKDLI
ERGLNVLIFNQRSIAEIITNMQIIGNIVGQSEKAKNITDGWKHQIQTWQKQNESISKRPTVFFQEWDEPIITGIQWVSEA
VALAGGIDCFSHLKDRKLAKDRIIQAEDVREANPDIYVGSWCGKAMDWDWVRNKPEWQSTGFLQNNRIYEMDPSIILQPG
PALFLEGIPKLREFFLTA
>Mature_257_residues
GPKRIICLTEEPTEMIYLLGEEKRIVGISVYTERPVRAKEEKTKVSAFISGNLKKILSLEPDLVIGFSDIQGQLAKDLIE
RGLNVLIFNQRSIAEIITNMQIIGNIVGQSEKAKNITDGWKHQIQTWQKQNESISKRPTVFFQEWDEPIITGIQWVSEAV
ALAGGIDCFSHLKDRKLAKDRIIQAEDVREANPDIYVGSWCGKAMDWDWVRNKPEWQSTGFLQNNRIYEMDPSIILQPGP
ALFLEGIPKLREFFLTA

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 29430; Mature: 29299

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPKRIICLTEEPTEMIYLLGEEKRIVGISVYTERPVRAKEEKTKVSAFISGNLKKILSL
CCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCC
EPDLVIGFSDIQGQLAKDLIERGLNVLIFNQRSIAEIITNMQIIGNIVGQSEKAKNITDG
CCCEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHCCCCHHH
WKHQIQTWQKQNESISKRPTVFFQEWDEPIITGIQWVSEAVALAGGIDCFSHLKDRKLAK
HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRIIQAEDVREANPDIYVGSWCGKAMDWDWVRNKPEWQSTGFLQNNRIYEMDPSIILQPG
HHCCCHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEECCEEEEECCCEEECCC
PALFLEGIPKLREFFLTA
CHHHHCCCHHHHHHHCCC
>Mature Secondary Structure 
GPKRIICLTEEPTEMIYLLGEEKRIVGISVYTERPVRAKEEKTKVSAFISGNLKKILSL
CCCEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCC
EPDLVIGFSDIQGQLAKDLIERGLNVLIFNQRSIAEIITNMQIIGNIVGQSEKAKNITDG
CCCEEEEHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHCCCCHHH
WKHQIQTWQKQNESISKRPTVFFQEWDEPIITGIQWVSEAVALAGGIDCFSHLKDRKLAK
HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRIIQAEDVREANPDIYVGSWCGKAMDWDWVRNKPEWQSTGFLQNNRIYEMDPSIILQPG
HHCCCHHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCEECCEEEEECCCEEECCC
PALFLEGIPKLREFFLTA
CHHHHCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]