| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219555
Identifier: 183219555
GI number: 183219555
Start: 128612
End: 130006
Strand: Direct
Name: 183219555
Synonym: LEPBI_I0128
Alternate gene names: NA
Gene position: 128612-130006 (Clockwise)
Preceding gene: 183219554
Following gene: 183219556
Centisome position: 3.57
GC content: 41.58
Gene sequence:
>1395_bases ATGAAACGTAAGATAGCGATTCTCGCTACAATAGCAATTACATTTTTAACCATCGGATGTCCAGGCAAAGGTGGTGGTGG TGGGTTAGATACTAGCCTTCTGTTATTGGGTTTGGCAGTCGGGTCCAGTGCGAATAGCGGCAGTCAGCCGTGCATTCAAA AACGGGAATTAACGGTGCCTGTTGTCGGAAGTACACCCGATTTTTATGATGATGGAAAAACTTTATATTGGTCGGATATG TTGTCCTATACAGCGGGACCTAACAATCCAAATGCGATTGTTTATTTTGAACAGGATCATGGATTTACCGGCGCAGATTT TCGACCGACTCTCTATTTCTTTTATGGAAATGCGAGTTATTCGAATACTTTCAATAATCGAGAAGGCATTCTCGCTGGCC AACATGCGACTTCCATGCACTCTTATGGCTCCAACTCATTTTTTTACTTGGCTTCCGGATCTTTCATCACACCGAATCCT GCATTTTTGAACCAAAGAATCGGTTTGGATTTGAATGGTCCTGTGAATGCAAATTTTACCTATAAAGAAGCAATTTCGTG TAATGTGCCAGCGTCCGAGGATAGGAACTTTTTTACCAGTGGTGGGTCCAGTTCTACCAATGGGTTGAACAAAGTGTGGA CCACTCGCAAGAAATTAAACGTAAACATTATCTTTTTACCGAATTCCTACGTAACACAAACTTTGGATGCCATCCAACCA GCCTTGGATCGATTTAAGGAAGTATATGCACAATCGACCGTTGGGATCGACTTGAATTTTAAGGTAACGATTTCCACGAA CACAGAATTTTCTTCCATCACTGATGTTGCATCTGAAAATAAAAATCTCCCAGGAGGTTTGATTCGTTTGTACACATCTA CTGGTGACTTACAAGATCCAAATGCTTTGAACATTTACTTTGCTTCTGAGGCTGATGGTATTGCTGGGCTTTTAGGGATT GCTGGTGGAATTCCAGGACTTCCTGGATTTGTGGGAACCAAAGCAAGTGGAATGGTTGTGTTTACAGAATCACATAGAAG TAGCGGTGCAGTAGGAACAGTGCTCTCAAATGCTGATTTAACGTTTATTGGAAACACGATTGCACATGAAGCTGGTCACT TTCTTGGTTTATTCCATGTGAATGAACGAACTGGAGCAACAAATGCCTCGGCAATCAACTATGTTGAAGATCCTTTAATT GAAACTCCAAAGTGTATGGCCGCTCATAATGTGAATGGGAATGGTGTCGTTGATATTTCAGAATGTTTAGGCACTGGATT TACAAATTCTGGAGCTTTAAACCTTATGTTTTGGGCTGGTGATGGAGTCACAAATCAAAGTCAATTGACTGGGGAACAAG GATGGGTATTGAGGAGAAACCCGTTAGCGTATTAA
Upstream 100 bases:
>100_bases TCGTTTCGTATGGTTCGCATTAGGTGTTTATAAGCATGCAAAATTTTGCATTTTTTAACATGTTCCTGCAATAAAAACAC CAGTTGAGGAAATAGAAAAT
Downstream 100 bases:
>100_bases ACTATGAAACGAATATTTATATTTCTATTAATTGTAACATCGATTGGAATCTACTCCGAAAGTTTGGATCCAATAAAACT GGAAAAAATCACTTCCTTTT
Product: putative signal peptide
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MKRKIAILATIAITFLTIGCPGKGGGGGLDTSLLLLGLAVGSSANSGSQPCIQKRELTVPVVGSTPDFYDDGKTLYWSDM LSYTAGPNNPNAIVYFEQDHGFTGADFRPTLYFFYGNASYSNTFNNREGILAGQHATSMHSYGSNSFFYLASGSFITPNP AFLNQRIGLDLNGPVNANFTYKEAISCNVPASEDRNFFTSGGSSSTNGLNKVWTTRKKLNVNIIFLPNSYVTQTLDAIQP ALDRFKEVYAQSTVGIDLNFKVTISTNTEFSSITDVASENKNLPGGLIRLYTSTGDLQDPNALNIYFASEADGIAGLLGI AGGIPGLPGFVGTKASGMVVFTESHRSSGAVGTVLSNADLTFIGNTIAHEAGHFLGLFHVNERTGATNASAINYVEDPLI ETPKCMAAHNVNGNGVVDISECLGTGFTNSGALNLMFWAGDGVTNQSQLTGEQGWVLRRNPLAY
Sequences:
>Translated_464_residues MKRKIAILATIAITFLTIGCPGKGGGGGLDTSLLLLGLAVGSSANSGSQPCIQKRELTVPVVGSTPDFYDDGKTLYWSDM LSYTAGPNNPNAIVYFEQDHGFTGADFRPTLYFFYGNASYSNTFNNREGILAGQHATSMHSYGSNSFFYLASGSFITPNP AFLNQRIGLDLNGPVNANFTYKEAISCNVPASEDRNFFTSGGSSSTNGLNKVWTTRKKLNVNIIFLPNSYVTQTLDAIQP ALDRFKEVYAQSTVGIDLNFKVTISTNTEFSSITDVASENKNLPGGLIRLYTSTGDLQDPNALNIYFASEADGIAGLLGI AGGIPGLPGFVGTKASGMVVFTESHRSSGAVGTVLSNADLTFIGNTIAHEAGHFLGLFHVNERTGATNASAINYVEDPLI ETPKCMAAHNVNGNGVVDISECLGTGFTNSGALNLMFWAGDGVTNQSQLTGEQGWVLRRNPLAY >Mature_464_residues MKRKIAILATIAITFLTIGCPGKGGGGGLDTSLLLLGLAVGSSANSGSQPCIQKRELTVPVVGSTPDFYDDGKTLYWSDM LSYTAGPNNPNAIVYFEQDHGFTGADFRPTLYFFYGNASYSNTFNNREGILAGQHATSMHSYGSNSFFYLASGSFITPNP AFLNQRIGLDLNGPVNANFTYKEAISCNVPASEDRNFFTSGGSSSTNGLNKVWTTRKKLNVNIIFLPNSYVTQTLDAIQP ALDRFKEVYAQSTVGIDLNFKVTISTNTEFSSITDVASENKNLPGGLIRLYTSTGDLQDPNALNIYFASEADGIAGLLGI AGGIPGLPGFVGTKASGMVVFTESHRSSGAVGTVLSNADLTFIGNTIAHEAGHFLGLFHVNERTGATNASAINYVEDPLI ETPKCMAAHNVNGNGVVDISECLGTGFTNSGALNLMFWAGDGVTNQSQLTGEQGWVLRRNPLAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49320; Mature: 49320
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKIAILATIAITFLTIGCPGKGGGGGLDTSLLLLGLAVGSSANSGSQPCIQKRELTVP CCCEEEHHHEEEEEHEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE VVGSTPDFYDDGKTLYWSDMLSYTAGPNNPNAIVYFEQDHGFTGADFRPTLYFFYGNASY EECCCCCCCCCCCEEEEEHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC SNTFNNREGILAGQHATSMHSYGSNSFFYLASGSFITPNPAFLNQRIGLDLNGPVNANFT CCCCCCCCCEEECCCHHHHHHCCCCCEEEEEECCEECCCHHHHHHCCCEECCCCCCCCEE YKEAISCNVPASEDRNFFTSGGSSSTNGLNKVWTTRKKLNVNIIFLPNSYVTQTLDAIQP EHHEEEECCCCCCCCCEEECCCCCCCCCCHHHHEEEEEEEEEEEEECCHHHHHHHHHHHH ALDRFKEVYAQSTVGIDLNFKVTISTNTEFSSITDVASENKNLPGGLIRLYTSTGDLQDP HHHHHHHHHHHCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC NALNIYFASEADGIAGLLGIAGGIPGLPGFVGTKASGMVVFTESHRSSGAVGTVLSNADL CEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCE TFIGNTIAHEAGHFLGLFHVNERTGATNASAINYVEDPLIETPKCMAAHNVNGNGVVDIS EEECCHHHHCCCCEEEEEEECCCCCCCCCCEECHHHCCCCCCCCCEEEECCCCCCEEEHH ECLGTGFTNSGALNLMFWAGDGVTNQSQLTGEQGWVLRRNPLAY HHHCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCEEEECCCCCC >Mature Secondary Structure MKRKIAILATIAITFLTIGCPGKGGGGGLDTSLLLLGLAVGSSANSGSQPCIQKRELTVP CCCEEEHHHEEEEEHEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE VVGSTPDFYDDGKTLYWSDMLSYTAGPNNPNAIVYFEQDHGFTGADFRPTLYFFYGNASY EECCCCCCCCCCCEEEEEHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCC SNTFNNREGILAGQHATSMHSYGSNSFFYLASGSFITPNPAFLNQRIGLDLNGPVNANFT CCCCCCCCCEEECCCHHHHHHCCCCCEEEEEECCEECCCHHHHHHCCCEECCCCCCCCEE YKEAISCNVPASEDRNFFTSGGSSSTNGLNKVWTTRKKLNVNIIFLPNSYVTQTLDAIQP EHHEEEECCCCCCCCCEEECCCCCCCCCCHHHHEEEEEEEEEEEEECCHHHHHHHHHHHH ALDRFKEVYAQSTVGIDLNFKVTISTNTEFSSITDVASENKNLPGGLIRLYTSTGDLQDP HHHHHHHHHHHCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC NALNIYFASEADGIAGLLGIAGGIPGLPGFVGTKASGMVVFTESHRSSGAVGTVLSNADL CEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCE TFIGNTIAHEAGHFLGLFHVNERTGATNASAINYVEDPLIETPKCMAAHNVNGNGVVDIS EEECCHHHHCCCCEEEEEEECCCCCCCCCCEECHHHCCCCCCCCCEEEECCCCCCEEEHH ECLGTGFTNSGALNLMFWAGDGVTNQSQLTGEQGWVLRRNPLAY HHHCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA