| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fabG4 [H]
Identifier: 183219443
GI number: 183219443
Start: 15703
End: 16440
Strand: Direct
Name: fabG4 [H]
Synonym: LEPBI_I0016
Alternate gene names: 183219443
Gene position: 15703-16440 (Clockwise)
Preceding gene: 183219442
Following gene: 183219444
Centisome position: 0.44
GC content: 41.06
Gene sequence:
>738_bases ATGAATTTATTCGATGTAAAAGGAAAAACAGTTTTGATCACTGGTGCAAGCCGAGGGATCGGTAAATCGATGGCTCTTGG CTTTCGTGATGCAGGTGCCATTGTATACGGAGCAGGATCCAAACCAGAATCCATTCACTGGATGGAAAAAGAAGGAATCC ATGGTGTTGTTCTCGATGTTCGTAGTGAAGGGTCTGCATTTGAAGTGATTGGTAAAATTAAAACCAAACATGGAAAATTG GATACATTAATCAATAATGCAGGAATTGCCACAAATACACCTGCATCAGGATTCAAAGAGGACGAATTACAAAATATTGT CCAAACCAACTATGTGGGAGTATTTCGAAATTGTCAGGCTTACTACAAACATCATAAAAAAGAAGGTGGTAATATCATCA ATGTCGCATCTGTTCTTGGTATGGTAGGTAGCAAACTGGCATCTGTGTATTCGGGAACCAAAGGTGCCGTCATCACCTTA TCCAAAGCCCTTGCTATTGAATGGTGCAATAATGGATATCGGGTCAATGTCATTTGTCCTGGTCTGATTGACACAGATAT GACCGACATGATTAAAGATAAGGAATTCATCATGAAACAGGTATTAGCAGGTATTCCAATGGGAAGGCTTGGTAAACCCG AAGACATATTGGGTGCGGCGATTTATCTAGCATCTGATTCATCAGCGTACATGACAGGCCAATGCATTGTACTAGATGGT GGATTGACAGCGCAGTAG
Upstream 100 bases:
>100_bases GGGATTTGGTAAAAGATGACAATACTCTAGACTATAAAAAATTAATGGAAGATACCAAACCGCAAGCAAGCGAGTGTTAT CCATCCAACCATGAGGTAAA
Downstream 100 bases:
>100_bases AAGTCAAATTTATGATCCTTTACCTCCATCCAGATAATCCAGAAGTTCGAAAACTAAAACAGATTTCCGATAGATTGAAG GATGGAGCCATCTATATTTT
Product: 3-oxoacyl-[acyl-carrier-protein] reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNLFDVKGKTVLITGASRGIGKSMALGFRDAGAIVYGAGSKPESIHWMEKEGIHGVVLDVRSEGSAFEVIGKIKTKHGKL DTLINNAGIATNTPASGFKEDELQNIVQTNYVGVFRNCQAYYKHHKKEGGNIINVASVLGMVGSKLASVYSGTKGAVITL SKALAIEWCNNGYRVNVICPGLIDTDMTDMIKDKEFIMKQVLAGIPMGRLGKPEDILGAAIYLASDSSAYMTGQCIVLDG GLTAQ
Sequences:
>Translated_245_residues MNLFDVKGKTVLITGASRGIGKSMALGFRDAGAIVYGAGSKPESIHWMEKEGIHGVVLDVRSEGSAFEVIGKIKTKHGKL DTLINNAGIATNTPASGFKEDELQNIVQTNYVGVFRNCQAYYKHHKKEGGNIINVASVLGMVGSKLASVYSGTKGAVITL SKALAIEWCNNGYRVNVICPGLIDTDMTDMIKDKEFIMKQVLAGIPMGRLGKPEDILGAAIYLASDSSAYMTGQCIVLDG GLTAQ >Mature_245_residues MNLFDVKGKTVLITGASRGIGKSMALGFRDAGAIVYGAGSKPESIHWMEKEGIHGVVLDVRSEGSAFEVIGKIKTKHGKL DTLINNAGIATNTPASGFKEDELQNIVQTNYVGVFRNCQAYYKHHKKEGGNIINVASVLGMVGSKLASVYSGTKGAVITL SKALAIEWCNNGYRVNVICPGLIDTDMTDMIKDKEFIMKQVLAGIPMGRLGKPEDILGAAIYLASDSSAYMTGQCIVLDG GLTAQ
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=32.3651452282158, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI59889578, Length=203, Percent_Identity=30.0492610837438, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=27.2, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=28.8537549407115, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI66933014, Length=241, Percent_Identity=33.195020746888, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=28.6290322580645, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI10190704, Length=245, Percent_Identity=28.1632653061224, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=29.0836653386454, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI31542939, Length=200, Percent_Identity=29.5, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI126723750, Length=124, Percent_Identity=37.0967741935484, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=27.3684210526316, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4503301, Length=192, Percent_Identity=26.5625, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI4758504, Length=263, Percent_Identity=27.7566539923954, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI5031737, Length=239, Percent_Identity=24.2677824267782, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI109715829, Length=244, Percent_Identity=26.6393442622951, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4504505, Length=222, Percent_Identity=26.5765765765766, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4557649, Length=192, Percent_Identity=27.6041666666667, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI1787335, Length=244, Percent_Identity=36.4754098360656, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=30.241935483871, Blast_Score=134, Evalue=7e-33, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=35.3174603174603, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=31.8725099601594, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=30.7692307692308, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=31.0483870967742, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=32.5102880658436, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=29.3650793650794, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=29.8755186721992, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787905, Length=243, Percent_Identity=29.2181069958848, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786701, Length=198, Percent_Identity=30.8080808080808, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789378, Length=245, Percent_Identity=26.530612244898, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789057, Length=200, Percent_Identity=27, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787820, Length=178, Percent_Identity=28.0898876404494, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25147288, Length=244, Percent_Identity=30.7377049180328, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17562990, Length=256, Percent_Identity=33.203125, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17560150, Length=256, Percent_Identity=31.640625, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17561402, Length=262, Percent_Identity=31.2977099236641, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=31.640625, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562910, Length=260, Percent_Identity=31.9230769230769, Blast_Score=100, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17555706, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI72000259, Length=273, Percent_Identity=30.4029304029304, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=28.0487804878049, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17563726, Length=256, Percent_Identity=29.296875, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562904, Length=257, Percent_Identity=29.5719844357977, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562906, Length=258, Percent_Identity=29.4573643410853, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=30.241935483871, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=29.9610894941634, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=30.5343511450382, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=30.078125, Blast_Score=94, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=29.5275590551181, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=27.4193548387097, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=28.6821705426357, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=30.3501945525292, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=29.0076335877863, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17565030, Length=259, Percent_Identity=30.1158301158301, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=29.4573643410853, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531453, Length=256, Percent_Identity=27.734375, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560332, Length=258, Percent_Identity=30.2325581395349, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=28.5140562248996, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17561272, Length=123, Percent_Identity=32.520325203252, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17508895, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17557780, Length=196, Percent_Identity=30.1020408163265, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193203115, Length=210, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115534660, Length=206, Percent_Identity=26.6990291262136, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17564282, Length=192, Percent_Identity=29.6875, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=29.5698924731183, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=193, Percent_Identity=29.5336787564767, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322861, Length=237, Percent_Identity=29.1139240506329, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322067, Length=207, Percent_Identity=26.5700483091787, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=202, Percent_Identity=28.2178217821782, Blast_Score=62, Evalue=6e-11, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=30.8, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24643142, Length=241, Percent_Identity=31.1203319502075, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=29.8804780876494, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI23397609, Length=241, Percent_Identity=30.2904564315353, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=28.4, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=25.609756097561, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644339, Length=253, Percent_Identity=28.8537549407115, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=28.7937743190661, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24644337, Length=256, Percent_Identity=29.6875, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24581726, Length=207, Percent_Identity=28.9855072463768, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24640492, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281364892, Length=178, Percent_Identity=29.7752808988764, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24648944, Length=234, Percent_Identity=27.3504273504274, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24641232, Length=222, Percent_Identity=25.2252252252252, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641388, Length=234, Percent_Identity=26.0683760683761, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640442, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI21357673, Length=261, Percent_Identity=30.2681992337165, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26076; Mature: 26076
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFDVKGKTVLITGASRGIGKSMALGFRDAGAIVYGAGSKPESIHWMEKEGIHGVVLDV CCEEECCCCEEEEECCCCCCCCHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCEEEEEE RSEGSAFEVIGKIKTKHGKLDTLINNAGIATNTPASGFKEDELQNIVQTNYVGVFRNCQA CCCCCCEEEEEHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YYKHHKKEGGNIINVASVLGMVGSKLASVYSGTKGAVITLSKALAIEWCNNGYRVNVICP HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEC GLIDTDMTDMIKDKEFIMKQVLAGIPMGRLGKPEDILGAAIYLASDSSAYMTGQCIVLDG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCCEEEEEEEEECC GLTAQ CCCCC >Mature Secondary Structure MNLFDVKGKTVLITGASRGIGKSMALGFRDAGAIVYGAGSKPESIHWMEKEGIHGVVLDV CCEEECCCCEEEEECCCCCCCCHHCCCCCCCCEEEECCCCCCCCEEEECCCCCCEEEEEE RSEGSAFEVIGKIKTKHGKLDTLINNAGIATNTPASGFKEDELQNIVQTNYVGVFRNCQA CCCCCCEEEEEHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH YYKHHKKEGGNIINVASVLGMVGSKLASVYSGTKGAVITLSKALAIEWCNNGYRVNVICP HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCEEEEEEEC GLIDTDMTDMIKDKEFIMKQVLAGIPMGRLGKPEDILGAAIYLASDSSAYMTGQCIVLDG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEEEEECCCCCEEEEEEEEECC GLTAQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]