Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yjbB [H]

Identifier: 18311350

GI number: 18311350

Start: 2729994

End: 2731607

Strand: Reverse

Name: yjbB [H]

Synonym: CPE2368

Alternate gene names: 18311350

Gene position: 2731607-2729994 (Counterclockwise)

Preceding gene: 18311351

Following gene: 18311349

Centisome position: 90.11

GC content: 30.67

Gene sequence:

>1614_bases
TTGAAAGATGCAATTTTTACCTTAATGGAAGTTGCCGGTGGATTAGGTCTATTCCTTTTTGGAATGAAGTTAATGGGAGA
AGGATTAGAGAATGCTGCAGGTGATAAATTAAAAAGTATATTAGAGAAAGTTACTAAAAATCCAATATCAGCAGTTTTAG
TTGGTGCCTTTGTTACAATGGTAATACAAAGTTCAAGTGCTACTACAGTAATGGTAGTTGGATTTGTTAATGCCGGTCTT
ATGAATCTTGCACAAGCTGCTGGAGTAATCATGGGAGCAAATGTAGGTACAACTATTACGGCTCAACTTGTTGCCTTTAA
ATTAGATGAAATTGCACCATTGTTTGTTATAGTAGGTGTTGTTTTATTAATGTCAGCAAAACAAAAGAAGAGAAAAGATA
TTGCTGATATAATATTAGGTTTTGGTATCTTGTTTATGGGTATGGGAATAATGAGTTCAGCTTTAAAACCATTAGCTGAG
TCACCAATATTTTCACAGCTTATAATGGCTATAGACGATAACTGGATTTTAGGAATATTTACAGGTTTAGTTCTTACAGC
TATATTACAAAGTTCATCAGCTACTACAGGTATATTAATTGCCTTAGCATCAACTGGTTCTATAACTATAAATATAGTTT
TACCAATACTATTTGGATGTAATATAGGAACATGTGTAACTGCTTTAATTGCAAGTATTGGAGCAAACAAAACAGCTCAC
AAAGCTGCTGCCATACATTTAATGTTTAATATATTAGGTACACTTATATTTATACCATTCTTAAAACCTTTAGCATATAT
TGTCCAAGATATGAGCCCTGGAGATGTTGAAAGACAAATAGCTAATGCTCATACAATATTCAATATAACTGCTACTATAA
TACTTGTACCATTAAGTAAGTACATGATTATGATAGTTAACAAATTAATAAAAGGCGAAGATGAAATTGAACTTTGTGGA
CCTAAGTACCTTGATGAAAGATTATTAGAAACACCAGTAATAGCTGCAGGTCAAGTTCAAAAGGAAACTTTAAGAATGGC
TAATAAAGCTAAGGAAAATTTAGAGTTAAGTATGAAGGCTTTTAGAGAGAATAATGAAAGCTTAGTTAAAAAAGTATATG
AAAATGAAAAACTTATAAATATATTAGAAGAAGAAATAACTGCTTACCTAGTTAAATTATCTAAATGTGATTTATCTGCT
AAAGAAAGTAATTTAGTAGCATCAACTTTCCATATTGTAACTGATATTGAGAGAATAGGTGATCATGTTGAGAATATAGC
TGATTTAACTTTAGAAAAGGTAGGAAGAAAATTAAAATATAGTGAAGATGCTTTAAAGGAAATAGATTATATATATGATC
AAACAATTAGAGCTCTAGACATAACAATTGATGCTTATGCAAATGAAAATGTAGAGGAAGCTGGAACTATCTATGAAATA
GAAAGAAAGATAGATGCTTCTCAAAAAGAATTTAGAGAAAATCATATTAAGAGATTAAGCCAAGGTTCTTGCAATGCTTA
TGATGGTGCAATATTTATGGACTTATTAAGCAACTTTGAAAGAATTGGCGATCATTCTACTAACATAGCTGAAAGTGTTA
TGGAAGTGCATTAA

Upstream 100 bases:

>100_bases
GCAGTTATTATATTGTAAAATGTTATAGGATTGATATTTTAAAATTAAAAATAAAATAAGTTTGTATTTTACAAATTAAG
CAAAGTGGAGGAGAAGTATC

Downstream 100 bases:

>100_bases
AGATATTAAAGAATACCTAACATTAGGTATTCTTTTTTCTTTTACTTAGAATATTTCTTTATATATAGGAAAAAATAAAT
TGAGTTTCATAATTCTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 537

Protein sequence:

>537_residues
MKDAIFTLMEVAGGLGLFLFGMKLMGEGLENAAGDKLKSILEKVTKNPISAVLVGAFVTMVIQSSSATTVMVVGFVNAGL
MNLAQAAGVIMGANVGTTITAQLVAFKLDEIAPLFVIVGVVLLMSAKQKKRKDIADIILGFGILFMGMGIMSSALKPLAE
SPIFSQLIMAIDDNWILGIFTGLVLTAILQSSSATTGILIALASTGSITINIVLPILFGCNIGTCVTALIASIGANKTAH
KAAAIHLMFNILGTLIFIPFLKPLAYIVQDMSPGDVERQIANAHTIFNITATIILVPLSKYMIMIVNKLIKGEDEIELCG
PKYLDERLLETPVIAAGQVQKETLRMANKAKENLELSMKAFRENNESLVKKVYENEKLINILEEEITAYLVKLSKCDLSA
KESNLVASTFHIVTDIERIGDHVENIADLTLEKVGRKLKYSEDALKEIDYIYDQTIRALDITIDAYANENVEEAGTIYEI
ERKIDASQKEFRENHIKRLSQGSCNAYDGAIFMDLLSNFERIGDHSTNIAESVMEVH

Sequences:

>Translated_537_residues
MKDAIFTLMEVAGGLGLFLFGMKLMGEGLENAAGDKLKSILEKVTKNPISAVLVGAFVTMVIQSSSATTVMVVGFVNAGL
MNLAQAAGVIMGANVGTTITAQLVAFKLDEIAPLFVIVGVVLLMSAKQKKRKDIADIILGFGILFMGMGIMSSALKPLAE
SPIFSQLIMAIDDNWILGIFTGLVLTAILQSSSATTGILIALASTGSITINIVLPILFGCNIGTCVTALIASIGANKTAH
KAAAIHLMFNILGTLIFIPFLKPLAYIVQDMSPGDVERQIANAHTIFNITATIILVPLSKYMIMIVNKLIKGEDEIELCG
PKYLDERLLETPVIAAGQVQKETLRMANKAKENLELSMKAFRENNESLVKKVYENEKLINILEEEITAYLVKLSKCDLSA
KESNLVASTFHIVTDIERIGDHVENIADLTLEKVGRKLKYSEDALKEIDYIYDQTIRALDITIDAYANENVEEAGTIYEI
ERKIDASQKEFRENHIKRLSQGSCNAYDGAIFMDLLSNFERIGDHSTNIAESVMEVH
>Mature_537_residues
MKDAIFTLMEVAGGLGLFLFGMKLMGEGLENAAGDKLKSILEKVTKNPISAVLVGAFVTMVIQSSSATTVMVVGFVNAGL
MNLAQAAGVIMGANVGTTITAQLVAFKLDEIAPLFVIVGVVLLMSAKQKKRKDIADIILGFGILFMGMGIMSSALKPLAE
SPIFSQLIMAIDDNWILGIFTGLVLTAILQSSSATTGILIALASTGSITINIVLPILFGCNIGTCVTALIASIGANKTAH
KAAAIHLMFNILGTLIFIPFLKPLAYIVQDMSPGDVERQIANAHTIFNITATIILVPLSKYMIMIVNKLIKGEDEIELCG
PKYLDERLLETPVIAAGQVQKETLRMANKAKENLELSMKAFRENNESLVKKVYENEKLINILEEEITAYLVKLSKCDLSA
KESNLVASTFHIVTDIERIGDHVENIADLTLEKVGRKLKYSEDALKEIDYIYDQTIRALDITIDAYANENVEEAGTIYEI
ERKIDASQKEFRENHIKRLSQGSCNAYDGAIFMDLLSNFERIGDHSTNIAESVMEVH

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=537, Percent_Identity=25.3258845437616, Blast_Score=194, Evalue=9e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 58459; Mature: 58459

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDAIFTLMEVAGGLGLFLFGMKLMGEGLENAAGDKLKSILEKVTKNPISAVLVGAFVTM
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
VIQSSSATTVMVVGFVNAGLMNLAQAAGVIMGANVGTTITAQLVAFKLDEIAPLFVIVGV
HHCCCCCCEEEEEHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLLMSAKQKKRKDIADIILGFGILFMGMGIMSSALKPLAESPIFSQLIMAIDDNWILGIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
TGLVLTAILQSSSATTGILIALASTGSITINIVLPILFGCNIGTCVTALIASIGANKTAH
HHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCHHH
KAAAIHLMFNILGTLIFIPFLKPLAYIVQDMSPGDVERQIANAHTIFNITATIILVPLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YMIMIVNKLIKGEDEIELCGPKYLDERLLETPVIAAGQVQKETLRMANKAKENLELSMKA
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FRENNESLVKKVYENEKLINILEEEITAYLVKLSKCDLSAKESNLVASTFHIVTDIERIG
HHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DHVENIADLTLEKVGRKLKYSEDALKEIDYIYDQTIRALDITIDAYANENVEEAGTIYEI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCHHHHH
ERKIDASQKEFRENHIKRLSQGSCNAYDGAIFMDLLSNFERIGDHSTNIAESVMEVH
HHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKDAIFTLMEVAGGLGLFLFGMKLMGEGLENAAGDKLKSILEKVTKNPISAVLVGAFVTM
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
VIQSSSATTVMVVGFVNAGLMNLAQAAGVIMGANVGTTITAQLVAFKLDEIAPLFVIVGV
HHCCCCCCEEEEEHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLLMSAKQKKRKDIADIILGFGILFMGMGIMSSALKPLAESPIFSQLIMAIDDNWILGIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
TGLVLTAILQSSSATTGILIALASTGSITINIVLPILFGCNIGTCVTALIASIGANKTAH
HHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCHHH
KAAAIHLMFNILGTLIFIPFLKPLAYIVQDMSPGDVERQIANAHTIFNITATIILVPLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YMIMIVNKLIKGEDEIELCGPKYLDERLLETPVIAAGQVQKETLRMANKAKENLELSMKA
HHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FRENNESLVKKVYENEKLINILEEEITAYLVKLSKCDLSAKESNLVASTFHIVTDIERIG
HHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
DHVENIADLTLEKVGRKLKYSEDALKEIDYIYDQTIRALDITIDAYANENVEEAGTIYEI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHCCHHHHH
ERKIDASQKEFRENHIKRLSQGSCNAYDGAIFMDLLSNFERIGDHSTNIAESVMEVH
HHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]