Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311317

Identifier: 18311317

GI number: 18311317

Start: 2686790

End: 2687629

Strand: Reverse

Name: 18311317

Synonym: CPE2335

Alternate gene names: NA

Gene position: 2687629-2686790 (Counterclockwise)

Preceding gene: 18311318

Following gene: 18311316

Centisome position: 88.66

GC content: 32.14

Gene sequence:

>840_bases
ATGAGAACATCATTGAATATAGAAAATAAAATTAATATGATAACTGAAATGAGAGGAGATTCTGTATTTCAGGTTTTAGA
GTATGATAGTTTAAAGGGAGGAAATTCCTTAGAGCTTGCAGTTAAACTAAATCAAATGAAGGAAGCTAATATAAAGCTTA
GACAGGTAAGAATTATTTTAGAAGATAGCTCTGTAAATATAGAAAAGGGAGCCTTAAGCTATATGAGAGGTCCAATATCT
ATGAAAAATAAGATTGGTGGGCCAATAGGATTAGGTAAAAAACTTTTTTCTAGTAAAGTTACAGGAGAGAGTACATTTAA
ACCTAAATATGAAGGAACAGGGGATATATTTTTAGAACCTTCCTTTGGTCATTATGCCTTAATTGAATTAGAAGATGATG
AAATAATAGTTGATGATGGATTATTTTACGCTTGTGAAAGTAGTGTAGAAATAACTGCCCACATGAATAAATCTTTATCC
TCTATGGTTTTAGGAAATGAGGGAGTATTTCAAACTAAGCTTTCAGGAAATGGAATAGTGGTTTTAGAAATACCAGTACC
TGAGGAAGAGGTATTTAAATGTAAAATAAATAATGATGTGTTAAAGGTTGATGGAAATTTTGCCATATTGAGAACTGGAG
ATATTGAGTTTACAGTTGAAAAGTCATCAAAATCACTAGTATCTACAGCTACTGGAGGAGAAGGGCTTTTAAATGTATTT
AGGGGGACTGGAGAAGTATGGCTAATACCAACTAAATCTGTTTATGAAAAGCTTGAGAAGGGATGGAATTCCTTAAGACC
ATTAACAGATCCAAAGGGTAGCTCTAATACTAAGGTATAA

Upstream 100 bases:

>100_bases
TAATTTAATGATCTCTAGCTTTTTTTAATTTTTGTAATTATTAAGTTTGTAATTTTAGGATATAATTAAAGGAAGAACTT
AGCGTAAAGGGGCGATTTAC

Downstream 100 bases:

>100_bases
TTTATCAAGATTAAATTAGTTCTAATACAAGTATTATTTTATTTATTATGATAAAGAGATATAATTAACTTAATAAAGAA
AAAATATTTAACTATTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MRTSLNIENKINMITEMRGDSVFQVLEYDSLKGGNSLELAVKLNQMKEANIKLRQVRIILEDSSVNIEKGALSYMRGPIS
MKNKIGGPIGLGKKLFSSKVTGESTFKPKYEGTGDIFLEPSFGHYALIELEDDEIIVDDGLFYACESSVEITAHMNKSLS
SMVLGNEGVFQTKLSGNGIVVLEIPVPEEEVFKCKINNDVLKVDGNFAILRTGDIEFTVEKSSKSLVSTATGGEGLLNVF
RGTGEVWLIPTKSVYEKLEKGWNSLRPLTDPKGSSNTKV

Sequences:

>Translated_279_residues
MRTSLNIENKINMITEMRGDSVFQVLEYDSLKGGNSLELAVKLNQMKEANIKLRQVRIILEDSSVNIEKGALSYMRGPIS
MKNKIGGPIGLGKKLFSSKVTGESTFKPKYEGTGDIFLEPSFGHYALIELEDDEIIVDDGLFYACESSVEITAHMNKSLS
SMVLGNEGVFQTKLSGNGIVVLEIPVPEEEVFKCKINNDVLKVDGNFAILRTGDIEFTVEKSSKSLVSTATGGEGLLNVF
RGTGEVWLIPTKSVYEKLEKGWNSLRPLTDPKGSSNTKV
>Mature_279_residues
MRTSLNIENKINMITEMRGDSVFQVLEYDSLKGGNSLELAVKLNQMKEANIKLRQVRIILEDSSVNIEKGALSYMRGPIS
MKNKIGGPIGLGKKLFSSKVTGESTFKPKYEGTGDIFLEPSFGHYALIELEDDEIIVDDGLFYACESSVEITAHMNKSLS
SMVLGNEGVFQTKLSGNGIVVLEIPVPEEEVFKCKINNDVLKVDGNFAILRTGDIEFTVEKSSKSLVSTATGGEGLLNVF
RGTGEVWLIPTKSVYEKLEKGWNSLRPLTDPKGSSNTKV

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30653; Mature: 30653

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSLNIENKINMITEMRGDSVFQVLEYDSLKGGNSLELAVKLNQMKEANIKLRQVRIIL
CCCCCCCCHHHHHEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEE
EDSSVNIEKGALSYMRGPISMKNKIGGPIGLGKKLFSSKVTGESTFKPKYEGTGDIFLEP
ECCCCCEEHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEC
SFGHYALIELEDDEIIVDDGLFYACESSVEITAHMNKSLSSMVLGNEGVFQTKLSGNGIV
CCCCEEEEEECCCCEEEECCEEEEECCCEEEEEECCCCHHHEEECCCCEEEEEECCCCEE
VLEIPVPEEEVFKCKINNDVLKVDGNFAILRTGDIEFTVEKSSKSLVSTATGGEGLLNVF
EEEECCCCCCEEEEEECCCEEEECCCEEEEEECCEEEEEECCCCCEEEECCCCHHHHHHH
RGTGEVWLIPTKSVYEKLEKGWNSLRPLTDPKGSSNTKV
CCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTSLNIENKINMITEMRGDSVFQVLEYDSLKGGNSLELAVKLNQMKEANIKLRQVRIIL
CCCCCCCCHHHHHEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEE
EDSSVNIEKGALSYMRGPISMKNKIGGPIGLGKKLFSSKVTGESTFKPKYEGTGDIFLEP
ECCCCCEEHHHHHHHCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEC
SFGHYALIELEDDEIIVDDGLFYACESSVEITAHMNKSLSSMVLGNEGVFQTKLSGNGIV
CCCCEEEEEECCCCEEEECCEEEEECCCEEEEEECCCCHHHEEECCCCEEEEEECCCCEE
VLEIPVPEEEVFKCKINNDVLKVDGNFAILRTGDIEFTVEKSSKSLVSTATGGEGLLNVF
EEEECCCCCCEEEEEECCCEEEECCCEEEEEECCEEEEEECCCCCEEEECCCCHHHHHHH
RGTGEVWLIPTKSVYEKLEKGWNSLRPLTDPKGSSNTKV
CCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA