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The map label for this gene is oppA [H]

Identifier: 18311238

GI number: 18311238

Start: 2589975

End: 2591495

Strand: Reverse

Name: oppA [H]

Synonym: CPE2256

Alternate gene names: 18311238

Gene position: 2591495-2589975 (Counterclockwise)

Preceding gene: 18311239

Following gene: 18311236

Centisome position: 85.49

GC content: 26.3

Gene sequence:

>1521_bases
ATGAAGAAAGTAATTTTATTTATATGTTTAATAATTTTATTAGTAGTTGGAGTAGGAAGGAGTTATGTGGACGTAACCCC
TGTTTCTAATATGAACTTTGAATATAATGAAGGGCTTATATATTCTCTTGAAAGTTTACCAGATACCATAAGGCCTAGTG
AATCCTTAAATAAAGGAGAAGAGGATTTAGTAAGCAATATATTTTCAGGACTAGTTGAGGTAAATGAAAAAGGAGAACCA
ATTCCAGACCTTGCTATGGGATGGAAGATTAGTGATGATGGCTTAGAATATACATTTAAAATTAATGAAAAAAATAAGTG
GAGTAATGGCACAGAAGTGACAGCAAAGGATTTTCAAATATTTTTTAGGGATTTATTAAGTCCAGATAATGAAGATTATA
CAAGTAATGAGTTATATAGTATTTACGGAGTTAAGGATTATAGAGAAGGGAAAATTGATTTTAGTGAAGTAGCAATAAGT
AGTCCTGATGATTATACATTGGTTTTAAGAATGAACAATAGGGATGATAATTTACTTAAAAATTTAGCTAAACCTATATA
TAGACTAAGAGATTTAAATGAACCATTAGATAATTATAAGAAAGATTTTAATGAAATATCATATACGGGGCCATATGTTA
TATATGATGTAACTAAGGATGGATTTATAAGATTAAAAGATAATCCTTATAATAGTAGCGAATTAGAAATAAAAGATATA
GCTTTTAAGGAGAAAGACTCTGATGAAATTGAGTTAGCAGCTTTTAATCTAGAAAAAGTAGATATTTTAAAGAATCCTCC
TATAATATATTCAGAAGATATAGGATTATATAAAGATTTAAGTAAATATAATAGTGATATTTTAAAGTTAATGATTGTAA
ATAGTGATAAAGCTGAAATGGCTCAGGGAATATCTAATATTATGCAAGTTTTAATTAGTGATAGTAATATATTAAAAAAT
AATTTAGGAAAACCATATATAAAAGTAATAAATAACAAAGAAGAAATTCACTCAATTAAAAAGGATGGAGATAAAGGAGA
TTATAAGATTAATGAATCAGAAAAAAATAATCTTAAAGAATCAGGTAAAAATACTTTGAAAAAGGTTCTTAATAATAATG
AGGTAGTAAAAATAGTTGTAGGAAATAATGAAGAGGATAAAGCTTTAGCAAATGAGCTGAAAAAATTTTTAGACAAGGAG
CTATCCATAAAGAGTATAGTAAAAATTCATGAAGAGGGTATAGAGGAAGTAATAAAAAGTGGAGAGTTTAATATAGCTTT
TGGTGAATTAAACTTAAATGAAAAAAACTCAGAAAGCTTAAAAAAAGAAGATATAGATAAAGAAGAGGGAGAAGTAGATG
ATAAGAGTGAAGAAAGTGAAAAAGAAACTGCTACTTCAGAAAAGCCTAATTTAAGTTTAGTTAGTTTATATTTTAAAAAT
GATGTTTGGTGTAAATCGCCAAAGGTTAATTATTTATTTATTGATGGAAATGGGAACTTAATATTAAAATATAGCAGTTA
A

Upstream 100 bases:

>100_bases
TAAATTAAAGGAATAAATCAAGGAAATAAATCAAAGAAAGTATATTTAGAAATAAATTAAATAATTAAGTGATATAGTTA
TTAATGAAGGAGATATTTAC

Downstream 100 bases:

>100_bases
AATACTTATAAGTTTATATGAAAGTAAATTTGCACTCTAAGTATTAAAAAACTTTAGGGAAATTTATTTTTATATAAATA
ACCTTAAAGTATCAACCATA

Product: oligopeptide-binding protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MKKVILFICLIILLVVGVGRSYVDVTPVSNMNFEYNEGLIYSLESLPDTIRPSESLNKGEEDLVSNIFSGLVEVNEKGEP
IPDLAMGWKISDDGLEYTFKINEKNKWSNGTEVTAKDFQIFFRDLLSPDNEDYTSNELYSIYGVKDYREGKIDFSEVAIS
SPDDYTLVLRMNNRDDNLLKNLAKPIYRLRDLNEPLDNYKKDFNEISYTGPYVIYDVTKDGFIRLKDNPYNSSELEIKDI
AFKEKDSDEIELAAFNLEKVDILKNPPIIYSEDIGLYKDLSKYNSDILKLMIVNSDKAEMAQGISNIMQVLISDSNILKN
NLGKPYIKVINNKEEIHSIKKDGDKGDYKINESEKNNLKESGKNTLKKVLNNNEVVKIVVGNNEEDKALANELKKFLDKE
LSIKSIVKIHEEGIEEVIKSGEFNIAFGELNLNEKNSESLKKEDIDKEEGEVDDKSEESEKETATSEKPNLSLVSLYFKN
DVWCKSPKVNYLFIDGNGNLILKYSS

Sequences:

>Translated_506_residues
MKKVILFICLIILLVVGVGRSYVDVTPVSNMNFEYNEGLIYSLESLPDTIRPSESLNKGEEDLVSNIFSGLVEVNEKGEP
IPDLAMGWKISDDGLEYTFKINEKNKWSNGTEVTAKDFQIFFRDLLSPDNEDYTSNELYSIYGVKDYREGKIDFSEVAIS
SPDDYTLVLRMNNRDDNLLKNLAKPIYRLRDLNEPLDNYKKDFNEISYTGPYVIYDVTKDGFIRLKDNPYNSSELEIKDI
AFKEKDSDEIELAAFNLEKVDILKNPPIIYSEDIGLYKDLSKYNSDILKLMIVNSDKAEMAQGISNIMQVLISDSNILKN
NLGKPYIKVINNKEEIHSIKKDGDKGDYKINESEKNNLKESGKNTLKKVLNNNEVVKIVVGNNEEDKALANELKKFLDKE
LSIKSIVKIHEEGIEEVIKSGEFNIAFGELNLNEKNSESLKKEDIDKEEGEVDDKSEESEKETATSEKPNLSLVSLYFKN
DVWCKSPKVNYLFIDGNGNLILKYSS
>Mature_506_residues
MKKVILFICLIILLVVGVGRSYVDVTPVSNMNFEYNEGLIYSLESLPDTIRPSESLNKGEEDLVSNIFSGLVEVNEKGEP
IPDLAMGWKISDDGLEYTFKINEKNKWSNGTEVTAKDFQIFFRDLLSPDNEDYTSNELYSIYGVKDYREGKIDFSEVAIS
SPDDYTLVLRMNNRDDNLLKNLAKPIYRLRDLNEPLDNYKKDFNEISYTGPYVIYDVTKDGFIRLKDNPYNSSELEIKDI
AFKEKDSDEIELAAFNLEKVDILKNPPIIYSEDIGLYKDLSKYNSDILKLMIVNSDKAEMAQGISNIMQVLISDSNILKN
NLGKPYIKVINNKEEIHSIKKDGDKGDYKINESEKNNLKESGKNTLKKVLNNNEVVKIVVGNNEEDKALANELKKFLDKE
LSIKSIVKIHEEGIEEVIKSGEFNIAFGELNLNEKNSESLKKEDIDKEEGEVDDKSEESEKETATSEKPNLSLVSLYFKN
DVWCKSPKVNYLFIDGNGNLILKYSS

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=174, Percent_Identity=28.735632183908, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57692; Mature: 57692

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVILFICLIILLVVGVGRSYVDVTPVSNMNFEYNEGLIYSLESLPDTIRPSESLNKGE
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCEEEEHHHCCCCCCCCHHCCCCH
EDLVSNIFSGLVEVNEKGEPIPDLAMGWKISDDGLEYTFKINEKNKWSNGTEVTAKDFQI
HHHHHHHHHHHHHHCCCCCCCCCHHHCCEECCCCEEEEEEECCCCCCCCCCEEEHHHHHH
FFRDLLSPDNEDYTSNELYSIYGVKDYREGKIDFSEVAISSPDDYTLVLRMNNRDDNLLK
HHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHEEECCCCCEEEEEEECCCCHHHHH
NLAKPIYRLRDLNEPLDNYKKDFNEISYTGPYVIYDVTKDGFIRLKDNPYNSSELEIKDI
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEE
AFKEKDSDEIELAAFNLEKVDILKNPPIIYSEDIGLYKDLSKYNSDILKLMIVNSDKAEM
EECCCCCCCEEEEEECCEEEEHCCCCCEEEECCCCHHHHHHHHCCCEEEEEEECCCHHHH
AQGISNIMQVLISDSNILKNNLGKPYIKVINNKEEIHSIKKDGDKGDYKINESEKNNLKE
HHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCHHHHHHH
SGKNTLKKVLNNNEVVKIVVGNNEEDKALANELKKFLDKELSIKSIVKIHEEGIEEVIKS
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GEFNIAFGELNLNEKNSESLKKEDIDKEEGEVDDKSEESEKETATSEKPNLSLVSLYFKN
CCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECC
DVWCKSPKVNYLFIDGNGNLILKYSS
CEEECCCCEEEEEEECCCCEEEEECC
>Mature Secondary Structure
MKKVILFICLIILLVVGVGRSYVDVTPVSNMNFEYNEGLIYSLESLPDTIRPSESLNKGE
CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCEEEEHHHCCCCCCCCHHCCCCH
EDLVSNIFSGLVEVNEKGEPIPDLAMGWKISDDGLEYTFKINEKNKWSNGTEVTAKDFQI
HHHHHHHHHHHHHHCCCCCCCCCHHHCCEECCCCEEEEEEECCCCCCCCCCEEEHHHHHH
FFRDLLSPDNEDYTSNELYSIYGVKDYREGKIDFSEVAISSPDDYTLVLRMNNRDDNLLK
HHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHEEECCCCCEEEEEEECCCCHHHHH
NLAKPIYRLRDLNEPLDNYKKDFNEISYTGPYVIYDVTKDGFIRLKDNPYNSSELEIKDI
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEE
AFKEKDSDEIELAAFNLEKVDILKNPPIIYSEDIGLYKDLSKYNSDILKLMIVNSDKAEM
EECCCCCCCEEEEEECCEEEEHCCCCCEEEECCCCHHHHHHHHCCCEEEEEEECCCHHHH
AQGISNIMQVLISDSNILKNNLGKPYIKVINNKEEIHSIKKDGDKGDYKINESEKNNLKE
HHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCHHHHHHH
SGKNTLKKVLNNNEVVKIVVGNNEEDKALANELKKFLDKELSIKSIVKIHEEGIEEVIKS
HHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
GEFNIAFGELNLNEKNSESLKKEDIDKEEGEVDDKSEESEKETATSEKPNLSLVSLYFKN
CCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECC
DVWCKSPKVNYLFIDGNGNLILKYSS
CEEECCCCEEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]