| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311213
Identifier: 18311213
GI number: 18311213
Start: 2552924
End: 2553943
Strand: Reverse
Name: 18311213
Synonym: CPE2231
Alternate gene names: NA
Gene position: 2553943-2552924 (Counterclockwise)
Preceding gene: 18311214
Following gene: 18311212
Centisome position: 84.25
GC content: 26.96
Gene sequence:
>1020_bases ATGAGGTTTATTCCGTACTCAAATGGATTTCATAAAATGAACAAAAATATAAAAATAAAGCCTATAAACGTAATTAGGAA TATTTTTATATTTATATTAGCTCTAGTATTTATAGGCTTTGCTTATCAAATGATATTAAATAAAATCGATAGTAAAAAAA TAGAACCAGATAACAAGTATGTAAGAATTGATAGTAAAAAAAATTATTATAATTTCCAAGGAGAAAGTAAACCAACTATA ATAATGAGTTCTGACATAGGCTTAGGATTAAGTGAATGGAGTAAGGTTCAAGAGCTTATAGAAAAGGAATATGGGTATAG AACATTTTCTTATGATAGACCAGGATATGGTTTTTCAGAATCAGTAAAAGATGATGGTGTTAAAGAACAAGCTCAGCATC TTAGAATGATTCTTAAAAAATCAGGGATTGGTGGACCATACATACTTGTTGGAGAAGGATATGGTGGATTAGTAATGTGT AACTTTGCTGAACTTTATCCTGATTTAGTTCAAGGAGTTATTCTCGTAGATCCAATAAGTGAAGAAGCTTTAAGTAAAAA TAAAGACTATATGAAACAGTATTCAAGTGAAAAAATCAGTAGATTTATACAAAAGTATGGTTCATACTTTGGATTAACAT CAATAATGAATAAATTTGGTATGTTAAAAAATCCAAATGGTTTAGAGGAAAATTTAAGTAATGAAAATCTTAAGGTTTAT AATATTTTAAGAACAAAAAGTGATTATAATAGTGGATACTATAGTGAGCTTACAAATATTTTAGAGCAAAGTAGTAATTC ACAAAAATCTGGTTTATTAAATGGTAAACCTTTGAGCATAATAGTTAATGATAATGCTTTTACTAAGGAGCAAGAGAGTT TAAAGAAACTTACTTTAGACAATAAAGTTCAAATAATAAATGCTAAGAATAAGACAGATGTTATACCTTTAGAAAAGCCA GAATTATTTTTAGATAGTATAAGATTTATTCAAGATAATAGCTTGGAAGAGCAGAATTAG
Upstream 100 bases:
>100_bases GTGCTGCATATTTTGAATTATTAAAGGGAAATGTATCTGAAATGAGTCTTAACGCAAAACCTAATTTAAGATTAGGAGAA AGATAGGGGCTGAATTATCA
Downstream 100 bases:
>100_bases CCTAAGAATATAGACATATCCTATGACATAGAAATGACATAAACATGACATATAAATGACACAAAAAATGGTTATTATAA ACATGTGGAAAACAAATGTT
Product: hydrolase, alpha/beta fold family
Products: NA
Alternate protein names: Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold-Domain Containing Protein; Alpa/Beta Hydrolase-Thioesterase; Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRFIPYSNGFHKMNKNIKIKPINVIRNIFIFILALVFIGFAYQMILNKIDSKKIEPDNKYVRIDSKKNYYNFQGESKPTI IMSSDIGLGLSEWSKVQELIEKEYGYRTFSYDRPGYGFSESVKDDGVKEQAQHLRMILKKSGIGGPYILVGEGYGGLVMC NFAELYPDLVQGVILVDPISEEALSKNKDYMKQYSSEKISRFIQKYGSYFGLTSIMNKFGMLKNPNGLEENLSNENLKVY NILRTKSDYNSGYYSELTNILEQSSNSQKSGLLNGKPLSIIVNDNAFTKEQESLKKLTLDNKVQIINAKNKTDVIPLEKP ELFLDSIRFIQDNSLEEQN
Sequences:
>Translated_339_residues MRFIPYSNGFHKMNKNIKIKPINVIRNIFIFILALVFIGFAYQMILNKIDSKKIEPDNKYVRIDSKKNYYNFQGESKPTI IMSSDIGLGLSEWSKVQELIEKEYGYRTFSYDRPGYGFSESVKDDGVKEQAQHLRMILKKSGIGGPYILVGEGYGGLVMC NFAELYPDLVQGVILVDPISEEALSKNKDYMKQYSSEKISRFIQKYGSYFGLTSIMNKFGMLKNPNGLEENLSNENLKVY NILRTKSDYNSGYYSELTNILEQSSNSQKSGLLNGKPLSIIVNDNAFTKEQESLKKLTLDNKVQIINAKNKTDVIPLEKP ELFLDSIRFIQDNSLEEQN >Mature_339_residues MRFIPYSNGFHKMNKNIKIKPINVIRNIFIFILALVFIGFAYQMILNKIDSKKIEPDNKYVRIDSKKNYYNFQGESKPTI IMSSDIGLGLSEWSKVQELIEKEYGYRTFSYDRPGYGFSESVKDDGVKEQAQHLRMILKKSGIGGPYILVGEGYGGLVMC NFAELYPDLVQGVILVDPISEEALSKNKDYMKQYSSEKISRFIQKYGSYFGLTSIMNKFGMLKNPNGLEENLSNENLKVY NILRTKSDYNSGYYSELTNILEQSSNSQKSGLLNGKPLSIIVNDNAFTKEQESLKKLTLDNKVQIINAKNKTDVIPLEKP ELFLDSIRFIQDNSLEEQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38812; Mature: 38812
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIPYSNGFHKMNKNIKIKPINVIRNIFIFILALVFIGFAYQMILNKIDSKKIEPDNKY CCCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VRIDSKKNYYNFQGESKPTIIMSSDIGLGLSEWSKVQELIEKEYGYRTFSYDRPGYGFSE EEECCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC SVKDDGVKEQAQHLRMILKKSGIGGPYILVGEGYGGLVMCNFAELYPDLVQGVILVDPIS CHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCEEEECCCC EEALSKNKDYMKQYSSEKISRFIQKYGSYFGLTSIMNKFGMLKNPNGLEENLSNENLKVY HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCEEEE NILRTKSDYNSGYYSELTNILEQSSNSQKSGLLNGKPLSIIVNDNAFTKEQESLKKLTLD EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC NKVQIINAKNKTDVIPLEKPELFLDSIRFIQDNSLEEQN CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRFIPYSNGFHKMNKNIKIKPINVIRNIFIFILALVFIGFAYQMILNKIDSKKIEPDNKY CCCCCCCCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VRIDSKKNYYNFQGESKPTIIMSSDIGLGLSEWSKVQELIEKEYGYRTFSYDRPGYGFSE EEECCCCCEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC SVKDDGVKEQAQHLRMILKKSGIGGPYILVGEGYGGLVMCNFAELYPDLVQGVILVDPIS CHHCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECHHHHHHHHHCCEEEECCCC EEALSKNKDYMKQYSSEKISRFIQKYGSYFGLTSIMNKFGMLKNPNGLEENLSNENLKVY HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHCCCCCCEEEE NILRTKSDYNSGYYSELTNILEQSSNSQKSGLLNGKPLSIIVNDNAFTKEQESLKKLTLD EEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCC NKVQIINAKNKTDVIPLEKPELFLDSIRFIQDNSLEEQN CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA