| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is wecB [C]
Identifier: 18311178
GI number: 18311178
Start: 2516741
End: 2517895
Strand: Reverse
Name: wecB [C]
Synonym: CPE2196
Alternate gene names: 18311178
Gene position: 2517895-2516741 (Counterclockwise)
Preceding gene: 18311179
Following gene: 18311177
Centisome position: 83.06
GC content: 30.04
Gene sequence:
>1155_bases ATGGAAAAGATAAAAGTTTTAACTATCTTTGGAACAAGACCGGAAGCTATAAAAATGGCTCCATTAGTAAAAGAATTAGA AAAAAGACCGGAAATAGAATCAAAGGTTTGTGTAACTGCTCAACATAGAGAAATGTTAGATCAAGTTTTAGAACTATTTG ATATAAAGCCTGACTTTGATCTAGACATAATGAAAAATCGTCAAACTCTTACTGGAATAACAAATAGAGTTTTAGAAGGA TTAGAAAAAGTATTTACAGAAGAAAAACCAGATATGATACTTGTACATGGTGATACTACAACAACTTTTGCTGGAGGATT AGCAGCATTCTATCAACAAATAAGAGTAGGTCATGTTGAGGCGGGACTTAGAACTTTCGATAAATATTTCCCATTCCCAG AGGAAATGAATAGAAAGTTAACAGGTGCTTTAGCTGATTTACACTTTGCTCCAACTAAAGGATCAAAAGCTAACCTTTTA AGAGAAGGAATAAATGAAAATGACATAAAAATTACAGGTAACACTGTAATCGATGCTATGGAACATACTGTAGAAGATAA CTATGTTTTTGAAAATGATGAATTAAATAAAATAGATTTTGAAAACAAAAAAGTTATCATGATAACTGCACATAGAAGAG AAAACTGGGGAGAAGGTATAGAAAATATCTGTACAGCTTTAAATAAAATAGTTGAAGATAATAAAGATGTTGAATTAGTT TACCTTGTTCACTTAAATCCAGTTGTAAAAGATGTTGTTTATAAAAATCTTGATGGTAAAGAAAGAGTACATCTTTTACC ACCACTTGATACAAAAGAAACTCATAACTTAATGAATAAATGCTTTATGGTTATGACTGATTCAGGTGGATTACAAGAAG AAGCTCCTCATTTAGGAAAACCAGTATTAGTTTTAAGAGATGTTACAGAAAGACCAGAAGCTGTTCAATCAGGAACAGTT AAATTAGTTGGTACTGATGTTGAAAAAATATTAGAAGAAGCTAATTCACTTATAAATGATGAAAAAGCTTATGCCAAAAT GAGTAAAGCTATAAATCCATATGGAGATGGTAAGGCTTCTGAAAGAATAGTAAAAGCTATTTTAAATTACTTTGGAAAAA ATGATGAAGAAGTAGAAGAATTTATAAGTAAATAA
Upstream 100 bases:
>100_bases AGGTGATGCAGGAGATAGACTATTTGGAACAAAATAGTTATAATTTAAATAGCTACTTAATTTTAAGTAGCTATTAATTA TTTTTGGAGGTAAATGATTC
Downstream 100 bases:
>100_bases GACTTTGTTAAAAAAGTTTAATAAATATAATTTGAATAAATGGTATAAATAGACAGATATTTAGAATATTATAGAAATTT TAATAAAAGACTTCTATAAT
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MEKIKVLTIFGTRPEAIKMAPLVKELEKRPEIESKVCVTAQHREMLDQVLELFDIKPDFDLDIMKNRQTLTGITNRVLEG LEKVFTEEKPDMILVHGDTTTTFAGGLAAFYQQIRVGHVEAGLRTFDKYFPFPEEMNRKLTGALADLHFAPTKGSKANLL REGINENDIKITGNTVIDAMEHTVEDNYVFENDELNKIDFENKKVIMITAHRRENWGEGIENICTALNKIVEDNKDVELV YLVHLNPVVKDVVYKNLDGKERVHLLPPLDTKETHNLMNKCFMVMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVQSGTV KLVGTDVEKILEEANSLINDEKAYAKMSKAINPYGDGKASERIVKAILNYFGKNDEEVEEFISK
Sequences:
>Translated_384_residues MEKIKVLTIFGTRPEAIKMAPLVKELEKRPEIESKVCVTAQHREMLDQVLELFDIKPDFDLDIMKNRQTLTGITNRVLEG LEKVFTEEKPDMILVHGDTTTTFAGGLAAFYQQIRVGHVEAGLRTFDKYFPFPEEMNRKLTGALADLHFAPTKGSKANLL REGINENDIKITGNTVIDAMEHTVEDNYVFENDELNKIDFENKKVIMITAHRRENWGEGIENICTALNKIVEDNKDVELV YLVHLNPVVKDVVYKNLDGKERVHLLPPLDTKETHNLMNKCFMVMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVQSGTV KLVGTDVEKILEEANSLINDEKAYAKMSKAINPYGDGKASERIVKAILNYFGKNDEEVEEFISK >Mature_384_residues MEKIKVLTIFGTRPEAIKMAPLVKELEKRPEIESKVCVTAQHREMLDQVLELFDIKPDFDLDIMKNRQTLTGITNRVLEG LEKVFTEEKPDMILVHGDTTTTFAGGLAAFYQQIRVGHVEAGLRTFDKYFPFPEEMNRKLTGALADLHFAPTKGSKANLL REGINENDIKITGNTVIDAMEHTVEDNYVFENDELNKIDFENKKVIMITAHRRENWGEGIENICTALNKIVEDNKDVELV YLVHLNPVVKDVVYKNLDGKERVHLLPPLDTKETHNLMNKCFMVMTDSGGLQEEAPHLGKPVLVLRDVTERPEAVQSGTV KLVGTDVEKILEEANSLINDEKAYAKMSKAINPYGDGKASERIVKAILNYFGKNDEEVEEFISK
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=374, Percent_Identity=57.7540106951872, Blast_Score=398, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 43468; Mature: 43468
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIKVLTIFGTRPEAIKMAPLVKELEKRPEIESKVCVTAQHREMLDQVLELFDIKPDFD CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCCC LDIMKNRQTLTGITNRVLEGLEKVFTEEKPDMILVHGDTTTTFAGGLAAFYQQIRVGHVE CHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AGLRTFDKYFPFPEEMNRKLTGALADLHFAPTKGSKANLLREGINENDIKITGNTVIDAM HHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCCCCHHHHHHCCCCCCCEEEECCHHHHHH EHTVEDNYVFENDELNKIDFENKKVIMITAHRRENWGEGIENICTALNKIVEDNKDVELV HHHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEE YLVHLNPVVKDVVYKNLDGKERVHLLPPLDTKETHNLMNKCFMVMTDSGGLQEEAPHLGK EEEECCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCC PVLVLRDVTERPEAVQSGTVKLVGTDVEKILEEANSLINDEKAYAKMSKAINPYGDGKAS CEEEEECCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHH ERIVKAILNYFGKNDEEVEEFISK HHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure MEKIKVLTIFGTRPEAIKMAPLVKELEKRPEIESKVCVTAQHREMLDQVLELFDIKPDFD CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHCCCCCCC LDIMKNRQTLTGITNRVLEGLEKVFTEEKPDMILVHGDTTTTFAGGLAAFYQQIRVGHVE CHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH AGLRTFDKYFPFPEEMNRKLTGALADLHFAPTKGSKANLLREGINENDIKITGNTVIDAM HHHHHHHHHCCCHHHHHHHHHHHHHHCEECCCCCCHHHHHHCCCCCCCEEEECCHHHHHH EHTVEDNYVFENDELNKIDFENKKVIMITAHRRENWGEGIENICTALNKIVEDNKDVELV HHHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEE YLVHLNPVVKDVVYKNLDGKERVHLLPPLDTKETHNLMNKCFMVMTDSGGLQEEAPHLGK EEEECCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCC PVLVLRDVTERPEAVQSGTVKLVGTDVEKILEEANSLINDEKAYAKMSKAINPYGDGKAS CEEEEECCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHH ERIVKAILNYFGKNDEEVEEFISK HHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11466286; 7867955 [H]