Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311176

Identifier: 18311176

GI number: 18311176

Start: 2514247

End: 2514612

Strand: Reverse

Name: 18311176

Synonym: CPE2194

Alternate gene names: NA

Gene position: 2514612-2514247 (Counterclockwise)

Preceding gene: 18311177

Following gene: 18311175

Centisome position: 82.95

GC content: 23.77

Gene sequence:

>366_bases
GTGAACGCTAAAATTAAAAGTTTAGTTTTTTCAATTACGAAGACTAACATTTTATTAACAATAATAGCAACCCTATTAAT
TAGTTTATTTAATTTTAGATTTGGGGTGGCTTTTTTAGTTGGAAGTGCAATTGCAACAATTAATTTTACAGCAAATGCAA
TTGTAATTAACAAAGTCATAAGTAATAGAAGAGGAGCTTTAAAGATACAATTAAGTTTTGTATTAAGAATGCTTTTGATT
CTTTTATTTACACTAATCTTTATGAGAGATGTTAAGGAATTAGCATTTTATTTAATAGGATTCATTTTACACCAGATATC
AATATTTATTTATACTAAAAAAATAAGGCCTTATAAAAAACAATAA

Upstream 100 bases:

>100_bases
ATCAGAATATTAATAAATTCAACCAAAATTTAAATTTTATTAATATTAGATTCGGGAATATAATTAGTAAAGTAACATTG
CGGAACTATGGAGGTTATAT

Downstream 100 bases:

>100_bases
ATAAATATTTATATACATATATAAATTAATACTAAGATAGAAAGGGAGTGATTCCGTGGATATCTTTGCACCATTGTTTA
CAGTTAAGATTGGTAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNAKIKSLVFSITKTNILLTIIATLLISLFNFRFGVAFLVGSAIATINFTANAIVINKVISNRRGALKIQLSFVLRMLLI
LLFTLIFMRDVKELAFYLIGFILHQISIFIYTKKIRPYKKQ

Sequences:

>Translated_121_residues
MNAKIKSLVFSITKTNILLTIIATLLISLFNFRFGVAFLVGSAIATINFTANAIVINKVISNRRGALKIQLSFVLRMLLI
LLFTLIFMRDVKELAFYLIGFILHQISIFIYTKKIRPYKKQ
>Mature_121_residues
MNAKIKSLVFSITKTNILLTIIATLLISLFNFRFGVAFLVGSAIATINFTANAIVINKVISNRRGALKIQLSFVLRMLLI
LLFTLIFMRDVKELAFYLIGFILHQISIFIYTKKIRPYKKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13828; Mature: 13828

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKIKSLVFSITKTNILLTIIATLLISLFNFRFGVAFLVGSAIATINFTANAIVINKVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHH
SNRRGALKIQLSFVLRMLLILLFTLIFMRDVKELAFYLIGFILHQISIFIYTKKIRPYKK
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q
C
>Mature Secondary Structure
MNAKIKSLVFSITKTNILLTIIATLLISLFNFRFGVAFLVGSAIATINFTANAIVINKVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHH
SNRRGALKIQLSFVLRMLLILLFTLIFMRDVKELAFYLIGFILHQISIFIYTKKIRPYKK
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA