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The map label for this gene is atpL

Identifier: 18311174

GI number: 18311174

Start: 2513238

End: 2513456

Strand: Reverse

Name: atpL

Synonym: CPE2192

Alternate gene names: 18311174

Gene position: 2513456-2513238 (Counterclockwise)

Preceding gene: 18311175

Following gene: 18311173

Centisome position: 82.91

GC content: 38.36

Gene sequence:

>219_bases
ATGGATATGAAGTTATTAGCAGCAGGTATCGCTGTATTAGCAGGTATAGGAGCAGGAATAGGTATAGGTATTGCAACTGC
AGGAGCATTAGAGGCAACTGCAAGACAACCAGAAGCATCAGATAAGATTCAAAGTTTATTCATCATGGGAGCTGGTCTTT
CAGAAGCAACAGCTATCTATGGATTAGTTGTTTCAATAATCTTATTATTCGTTGCTTAA

Upstream 100 bases:

>100_bases
GTTAACTATGGTAAATATTAAAATTATAGCAGATCACTAAGAAAAGTTAATTAAACAAATCAAAGTAACTTTATTTGATT
TGAAAAAGGAGGAATTTTTA

Downstream 100 bases:

>100_bases
TATCAAATTACGTACTTTTTATTAAGAACTTGTAGTAATTAATAAATAAAGATAATAGAGTTAATATAATTGACTCCGAA
GGGAGGCTGTGATTGATATA

Product: F0F1 ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDMKLLAAGIAVLAGIGAGIGIGIATAGALEATARQPEASDKIQSLFIMGAGLSEATAIYGLVVSIILLFVA

Sequences:

>Translated_72_residues
MDMKLLAAGIAVLAGIGAGIGIGIATAGALEATARQPEASDKIQSLFIMGAGLSEATAIYGLVVSIILLFVA
>Mature_72_residues
MDMKLLAAGIAVLAGIGAGIGIGIATAGALEATARQPEASDKIQSLFIMGAGLSEATAIYGLVVSIILLFVA

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_CLOP1 (Q0TNB9)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696871.1
- ProteinModelPortal:   Q0TNB9
- SMR:   Q0TNB9
- STRING:   Q0TNB9
- GeneID:   4201186
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_2457
- TIGR:   CPF_2457
- HOGENOM:   HBG061269
- OMA:   FAYLGAG
- ProtClustDB:   PRK13469
- BioCyc:   CPER195103:CPF_2457-MONOMER
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 7088; Mature: 7088

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1046a4bc)-; HASH(0x102d0ef4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKLLAAGIAVLAGIGAGIGIGIATAGALEATARQPEASDKIQSLFIMGAGLSEATAIY
CCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH
GLVVSIILLFVA
HHHHHHHHHHCH
>Mature Secondary Structure
MDMKLLAAGIAVLAGIGAGIGIGIATAGALEATARQPEASDKIQSLFIMGAGLSEATAIY
CCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHH
GLVVSIILLFVA
HHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA