Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is pldB [H]

Identifier: 18309926

GI number: 18309926

Start: 1141575

End: 1142564

Strand: Direct

Name: pldB [H]

Synonym: CPE0944

Alternate gene names: 18309926

Gene position: 1141575-1142564 (Clockwise)

Preceding gene: 18309921

Following gene: 18309929

Centisome position: 37.66

GC content: 27.78

Gene sequence:

>990_bases
ATGTGTAAAACTTTAAATAGAAAATATATTTATAAATATGGGGAGAAAAAAGAGGATGTAGAAATAGTTGAAAATATGCT
AAATAGGATGAGAAATAGTGGAACTTTTAAAGGAGAGAATTTTGCTAATATATATTATGAAAAATACATAGTGGAAGAAT
CGGATAAAGCAATAGTTATATGTCATGGGTTTTCGGAATGTATAGAGAAGTATCATGAAATAATATACTATTTTCTAAAT
GAAGGTTTTTCAGTTTATATAATGGAACATAGAGGTCATGGGAGATCAGGCTGTTTAAGTAAATCTTGTAATACACAGGT
GGAAGTAGAATCCTTTGATTACTATGTTAAAGATCTAAAGACATTTTTAAATGAGGTTGTATTAAAAGATAAGAGGTTTA
ATAATAATTTATATTTATTTGCACATTCTATGGGGGGAGCTATAGGTACTATATTTTTAGAAAATAATCATGGGTATTTT
AAGAAGGTAATTTTAAATTCTCCAATGTTTAGAATAAATACAAGAGAATACTCTCATATAAAATGCAAATTAATAGCTAA
ATTTTTAATTCTTATGGGAAAAGGAGAGAATTTTATTTTTGGACAAAAACCCTTTGAGGAAGAGGAGAATTTAGAGGCAT
CAGGAACATCAGATAAACTTAGACATGGCTTATACCATAAATTTCTCCTAGAAAATCCTATTTTGAGAAGAGGTGGAGGC
TCTATTCATTGGTATAAAGAAGCTGCAAGGGCAACTGATTGTTTAATGAAAAAGAGAAATATAGAGAGAATTGACACGCC
TATTTTATTATTTAAAAGTGAGTTTGATTCCTATGTTGACACAAAATTTCATGATGAGTTTAAAAAGGTAGCTAAGTATT
GTGAGCTTATTGAAGTTAAGGGAAGTAAACATGAGGGATTTTTTGAAAAAGATGAAATTCTTTATGATTATTTAGATAAG
ATATTTAAATTTTTAGAGGAAAATAATTAG

Upstream 100 bases:

>100_bases
AATTGATTTTAACCTTTTATAAATATTTGTTTTTAATAAGTAGTATAATTATCTTAGGAAAAATATATAATCTATGAACA
TATAAAAAAGGGGGAACTTT

Downstream 100 bases:

>100_bases
ATATTATAAGAGAGGTTGTGCCTCTCTTATAATATCTTTTATATTGATAATCTTTCTTATAATAAACCTTCATTTTTAAG
TTTAGTAATAGATTTATCTA

Product: lysophospholipase

Products: NA

Alternate protein names: Lecithinase B [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MCKTLNRKYIYKYGEKKEDVEIVENMLNRMRNSGTFKGENFANIYYEKYIVEESDKAIVICHGFSECIEKYHEIIYYFLN
EGFSVYIMEHRGHGRSGCLSKSCNTQVEVESFDYYVKDLKTFLNEVVLKDKRFNNNLYLFAHSMGGAIGTIFLENNHGYF
KKVILNSPMFRINTREYSHIKCKLIAKFLILMGKGENFIFGQKPFEEEENLEASGTSDKLRHGLYHKFLLENPILRRGGG
SIHWYKEAARATDCLMKKRNIERIDTPILLFKSEFDSYVDTKFHDEFKKVAKYCELIEVKGSKHEGFFEKDEILYDYLDK
IFKFLEENN

Sequences:

>Translated_329_residues
MCKTLNRKYIYKYGEKKEDVEIVENMLNRMRNSGTFKGENFANIYYEKYIVEESDKAIVICHGFSECIEKYHEIIYYFLN
EGFSVYIMEHRGHGRSGCLSKSCNTQVEVESFDYYVKDLKTFLNEVVLKDKRFNNNLYLFAHSMGGAIGTIFLENNHGYF
KKVILNSPMFRINTREYSHIKCKLIAKFLILMGKGENFIFGQKPFEEEENLEASGTSDKLRHGLYHKFLLENPILRRGGG
SIHWYKEAARATDCLMKKRNIERIDTPILLFKSEFDSYVDTKFHDEFKKVAKYCELIEVKGSKHEGFFEKDEILYDYLDK
IFKFLEENN
>Mature_329_residues
MCKTLNRKYIYKYGEKKEDVEIVENMLNRMRNSGTFKGENFANIYYEKYIVEESDKAIVICHGFSECIEKYHEIIYYFLN
EGFSVYIMEHRGHGRSGCLSKSCNTQVEVESFDYYVKDLKTFLNEVVLKDKRFNNNLYLFAHSMGGAIGTIFLENNHGYF
KKVILNSPMFRINTREYSHIKCKLIAKFLILMGKGENFIFGQKPFEEEENLEASGTSDKLRHGLYHKFLLENPILRRGGG
SIHWYKEAARATDCLMKKRNIERIDTPILLFKSEFDSYVDTKFHDEFKKVAKYCELIEVKGSKHEGFFEKDEILYDYLDK
IFKFLEENN

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994980, Length=314, Percent_Identity=28.9808917197452, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.5 [H]

Molecular weight: Translated: 38889; Mature: 38889

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKTLNRKYIYKYGEKKEDVEIVENMLNRMRNSGTFKGENFANIYYEKYIVEESDKAIVI
CCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEECCCCEEEE
CHGFSECIEKYHEIIYYFLNEGFSVYIMEHRGHGRSGCLSKSCNTQVEVESFDYYVKDLK
ECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
TFLNEVVLKDKRFNNNLYLFAHSMGGAIGTIFLENNHGYFKKVILNSPMFRINTREYSHI
HHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHCCCEEEEECCCCCHH
KCKLIAKFLILMGKGENFIFGQKPFEEEENLEASGTSDKLRHGLYHKFLLENPILRRGGG
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCC
SIHWYKEAARATDCLMKKRNIERIDTPILLFKSEFDSYVDTKFHDEFKKVAKYCELIEVK
CEEHHHHHHHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSKHEGFFEKDEILYDYLDKIFKFLEENN
CCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCKTLNRKYIYKYGEKKEDVEIVENMLNRMRNSGTFKGENFANIYYEKYIVEESDKAIVI
CCCCCCCHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEECCCCEEEE
CHGFSECIEKYHEIIYYFLNEGFSVYIMEHRGHGRSGCLSKSCNTQVEVESFDYYVKDLK
ECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHH
TFLNEVVLKDKRFNNNLYLFAHSMGGAIGTIFLENNHGYFKKVILNSPMFRINTREYSHI
HHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHCCCEEEEECCCCCHH
KCKLIAKFLILMGKGENFIFGQKPFEEEENLEASGTSDKLRHGLYHKFLLENPILRRGGG
HHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCC
SIHWYKEAARATDCLMKKRNIERIDTPILLFKSEFDSYVDTKFHDEFKKVAKYCELIEVK
CEEHHHHHHHHHHHHHHHCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSKHEGFFEKDEILYDYLDKIFKFLEENN
CCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]