| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682709
Identifier: 182682709
GI number: 182682709
Start: 2497347
End: 2497859
Strand: Direct
Name: 182682709
Synonym: XfasM23_2200
Alternate gene names: NA
Gene position: 2497347-2497859 (Clockwise)
Preceding gene: 182682708
Following gene: 182682710
Centisome position: 98.49
GC content: 36.26
Gene sequence:
>513_bases ATGAGAATCTCACCTCTTTCCATACAACACATACTCTTAATTAATTTTCTTTTTATTTCTCTCGCATCAATGACTGGATG TGAATCAAAGGAGAAAGATCAAATGATTAAAGAATATATACAGAATGACTTAAAGGTCGGCCAGGTTGTTCGTGTCACTG ATCTCACCAAAGTGACACATGGAATGGTATGTACCCTTTACCCTTATCAGTCATACATTGACGAAAAGGTTCCACAAAGT GTTCATATTAATGCGTACCTAAAAGCATCAGGGTATATCGCAGATGAGTCACATTGGGCCTTTGTTATTGCTGAAACTGA AACAGTCAATCTTTATCAGTTCAAGCGATCCAGAAATCTGGATATCCTTGCCAGCCATGAAATCCAATCTGAACACAAAA CGAAGTTACCAGAACACTTTAAACCAGCTAATTGTGCATCTTTAGAAAATGCGGTAGTCACAAAAATCGAATCAAAAAAT AGATTTTTTTTGATCATGGGAGAAATTGAATGA
Upstream 100 bases:
>100_bases AAATAATAATAGCTATGGCTTTGCACCAGATAAAACCCATCATGACAATCCATTCAATAATAAGAAACATAGAATATTAC AAACTCATCGGAAATGAAAT
Downstream 100 bases:
>100_bases ATGGATATGAAAGTCTTTATAACCGTTACATGCAAGAGGCTAATAGATACGCAACGTATTACGGACTTGATCCTAGCACT GCACATAATGGTGAATGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRISPLSIQHILLINFLFISLASMTGCESKEKDQMIKEYIQNDLKVGQVVRVTDLTKVTHGMVCTLYPYQSYIDEKVPQS VHINAYLKASGYIADESHWAFVIAETETVNLYQFKRSRNLDILASHEIQSEHKTKLPEHFKPANCASLENAVVTKIESKN RFFLIMGEIE
Sequences:
>Translated_170_residues MRISPLSIQHILLINFLFISLASMTGCESKEKDQMIKEYIQNDLKVGQVVRVTDLTKVTHGMVCTLYPYQSYIDEKVPQS VHINAYLKASGYIADESHWAFVIAETETVNLYQFKRSRNLDILASHEIQSEHKTKLPEHFKPANCASLENAVVTKIESKN RFFLIMGEIE >Mature_170_residues MRISPLSIQHILLINFLFISLASMTGCESKEKDQMIKEYIQNDLKVGQVVRVTDLTKVTHGMVCTLYPYQSYIDEKVPQS VHINAYLKASGYIADESHWAFVIAETETVNLYQFKRSRNLDILASHEIQSEHKTKLPEHFKPANCASLENAVVTKIESKN RFFLIMGEIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19494; Mature: 19494
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISPLSIQHILLINFLFISLASMTGCESKEKDQMIKEYIQNDLKVGQVVRVTDLTKVTH CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHC GMVCTLYPYQSYIDEKVPQSVHINAYLKASGYIADESHWAFVIAETETVNLYQFKRSRNL CEEEEEECHHHHHHHHCCCEEEEEEEEEECCEEECCCCEEEEEEECCEEEEEEECCCCCC DILASHEIQSEHKTKLPEHFKPANCASLENAVVTKIESKNRFFLIMGEIE EEEECCCCCCHHHHCCCCCCCCCCCCHHCCHHEEEEECCCEEEEEEEECC >Mature Secondary Structure MRISPLSIQHILLINFLFISLASMTGCESKEKDQMIKEYIQNDLKVGQVVRVTDLTKVTH CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHC GMVCTLYPYQSYIDEKVPQSVHINAYLKASGYIADESHWAFVIAETETVNLYQFKRSRNL CEEEEEECHHHHHHHHCCCEEEEEEEEEECCEEECCCCEEEEEEECCEEEEEEECCCCCC DILASHEIQSEHKTKLPEHFKPANCASLENAVVTKIESKNRFFLIMGEIE EEEECCCCCCHHHHCCCCCCCCCCCCHHCCHHEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA