| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682697
Identifier: 182682697
GI number: 182682697
Start: 2487210
End: 2488415
Strand: Direct
Name: 182682697
Synonym: XfasM23_2188
Alternate gene names: NA
Gene position: 2487210-2488415 (Clockwise)
Preceding gene: 182682696
Following gene: 182682703
Centisome position: 98.09
GC content: 63.52
Gene sequence:
>1206_bases ATGAGTTGGGCCACACCAGTCAGCCTGCGCGCCCAGGTGGAACGCCTGTGGAAGCAGGGCGACTTGCTGCGGGCGCTGGT CACGGACACACACGCCATGACGTGGCCGCACCGCCTGACGCTGCAGGCGCCCAACGCTGCGGATCTGTCCGAGCGCTTTC AGGCGGTGCGTGATTGGGTGCAGGCCATCGTTGGCACCGCGCAGATTCGGATCCAATGGCGGGAATGGAAGCACCGCGTC CAAGGGACACAACAGGTTCCTGCAGCCGTCTATCTGGACACCCTGCAAGACGCGTTGGCTTTCATCGGTAAGACGCATGA AGCGCTGCAGTTTGAAGCGGTGTGGCAGCAGACCGCAGCCGCGCAGCCAGTGCTCCTGGCGTGGCTGTTACGACGCCCGA CCCAAGCGCTGGAGGTGGCCGACCGCTGGGAACGTCTTTTAGCCGTGGTCGCCTGGCTTCAGGCGCATCCTCGTCCAGGC GTTTACCTACGCCAAGTAGATGTGCCCGGAGTGGACAGCAAATTCATTGAGGCGCACAAAAGCGTGTTGACCGCGCTGCT GGACTTGGCGTTGCCGCCAGAGAGTATCGACACGGCCGCCAACGGCGTGCGTCAGTTCACGCGCCGCTTCGGCTTCCTCG ACAAGCCTGTGCCGATCCGGTTTCGTCTGCTTGACGCCGCGCTGCCCGGCCTGCCGGGCTGGGCAGGGCTGCCGGACATC AGCCTAGACGCGGCTCACTTCGCGGCACTGACGCTCCCTATCACGCGCGTCTTCATCATCGAGAACGAAATCAGCTTCCT CACCTTCCCCAAGGTGGCCGGTGCGATCGTCATCTTCGGCGCTGGCTACGGCTGGGAACAGCTGGCACGCGCCGCGTGGC TGCATGCCTGCCAACTGTACTACTGGGGTGACATGGATACTCACGGCTTCACCATCCTCAACCGGCTGCGTGGCTACTTT GGGCACGTGACTTCTGTGCTCATGGACCAAGACACATTGTTGGCGCATCGCGTGCACTGGGACGAGGAATCCAAGCCGAC ACGCCAGGCCTTGGAGCACCTCACCACGGAAGAGGCTGCCGTCTACGATGACCTGCGATACGATCGCCACCAGCCCAGGC TGCGCCTGGAGCAGGAGCGGATTGGCTTTCGCTGGGTGTGCGATCGGCTGGCCTGCTTGCTCTCAGCACCACCCCAGGAT GCGTAA
Upstream 100 bases:
>100_bases TGCACAACAAGGGCGGGTGCGACTCGCAGCTACGCTGCCTGTCGATTGAGGAGTACCAGGCGGAGAAAACCAATGGAAGC GGACCGAGAGGCGACGCCCG
Downstream 100 bases:
>100_bases GCTCCAGAAGCGGCGGTGCGCTGGGGCAACGCTGCGCCATCAATCACAACACCTCCGCCCCCATTCTCGGTTTTGGGGTC CTTTGCGGGTTCCGTGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSWATPVSLRAQVERLWKQGDLLRALVTDTHAMTWPHRLTLQAPNAADLSERFQAVRDWVQAIVGTAQIRIQWREWKHRV QGTQQVPAAVYLDTLQDALAFIGKTHEALQFEAVWQQTAAAQPVLLAWLLRRPTQALEVADRWERLLAVVAWLQAHPRPG VYLRQVDVPGVDSKFIEAHKSVLTALLDLALPPESIDTAANGVRQFTRRFGFLDKPVPIRFRLLDAALPGLPGWAGLPDI SLDAAHFAALTLPITRVFIIENEISFLTFPKVAGAIVIFGAGYGWEQLARAAWLHACQLYYWGDMDTHGFTILNRLRGYF GHVTSVLMDQDTLLAHRVHWDEESKPTRQALEHLTTEEAAVYDDLRYDRHQPRLRLEQERIGFRWVCDRLACLLSAPPQD A
Sequences:
>Translated_401_residues MSWATPVSLRAQVERLWKQGDLLRALVTDTHAMTWPHRLTLQAPNAADLSERFQAVRDWVQAIVGTAQIRIQWREWKHRV QGTQQVPAAVYLDTLQDALAFIGKTHEALQFEAVWQQTAAAQPVLLAWLLRRPTQALEVADRWERLLAVVAWLQAHPRPG VYLRQVDVPGVDSKFIEAHKSVLTALLDLALPPESIDTAANGVRQFTRRFGFLDKPVPIRFRLLDAALPGLPGWAGLPDI SLDAAHFAALTLPITRVFIIENEISFLTFPKVAGAIVIFGAGYGWEQLARAAWLHACQLYYWGDMDTHGFTILNRLRGYF GHVTSVLMDQDTLLAHRVHWDEESKPTRQALEHLTTEEAAVYDDLRYDRHQPRLRLEQERIGFRWVCDRLACLLSAPPQD A >Mature_400_residues SWATPVSLRAQVERLWKQGDLLRALVTDTHAMTWPHRLTLQAPNAADLSERFQAVRDWVQAIVGTAQIRIQWREWKHRVQ GTQQVPAAVYLDTLQDALAFIGKTHEALQFEAVWQQTAAAQPVLLAWLLRRPTQALEVADRWERLLAVVAWLQAHPRPGV YLRQVDVPGVDSKFIEAHKSVLTALLDLALPPESIDTAANGVRQFTRRFGFLDKPVPIRFRLLDAALPGLPGWAGLPDIS LDAAHFAALTLPITRVFIIENEISFLTFPKVAGAIVIFGAGYGWEQLARAAWLHACQLYYWGDMDTHGFTILNRLRGYFG HVTSVLMDQDTLLAHRVHWDEESKPTRQALEHLTTEEAAVYDDLRYDRHQPRLRLEQERIGFRWVCDRLACLLSAPPQDA
Specific function: Unknown
COG id: COG4924
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45567; Mature: 45436
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWATPVSLRAQVERLWKQGDLLRALVTDTHAMTWPHRLTLQAPNAADLSERFQAVRDWV CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHH QAIVGTAQIRIQWREWKHRVQGTQQVPAAVYLDTLQDALAFIGKTHEALQFEAVWQQTAA HHHHCCHHEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC AQPVLLAWLLRRPTQALEVADRWERLLAVVAWLQAHPRPGVYLRQVDVPGVDSKFIEAHK CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHH SVLTALLDLALPPESIDTAANGVRQFTRRFGFLDKPVPIRFRLLDAALPGLPGWAGLPDI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHCCCCCCCCCCCCC SLDAAHFAALTLPITRVFIIENEISFLTFPKVAGAIVIFGAGYGWEQLARAAWLHACQLY CCCHHHHHHHHHHHEEEEEEECCCCEEECHHHHCEEEEEECCCCHHHHHHHHHHHHHHHE YWGDMDTHGFTILNRLRGYFGHVTSVLMDQDTLLAHRVHWDEESKPTRQALEHLTTEEAA EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VYDDLRYDRHQPRLRLEQERIGFRWVCDRLACLLSAPPQDA HHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SWATPVSLRAQVERLWKQGDLLRALVTDTHAMTWPHRLTLQAPNAADLSERFQAVRDWV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEECCCCCCHHHHHHHHHHHH QAIVGTAQIRIQWREWKHRVQGTQQVPAAVYLDTLQDALAFIGKTHEALQFEAVWQQTAA HHHHCCHHEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC AQPVLLAWLLRRPTQALEVADRWERLLAVVAWLQAHPRPGVYLRQVDVPGVDSKFIEAHK CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHH SVLTALLDLALPPESIDTAANGVRQFTRRFGFLDKPVPIRFRLLDAALPGLPGWAGLPDI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEHHHHCCCCCCCCCCCCC SLDAAHFAALTLPITRVFIIENEISFLTFPKVAGAIVIFGAGYGWEQLARAAWLHACQLY CCCHHHHHHHHHHHEEEEEEECCCCEEECHHHHCEEEEEECCCCHHHHHHHHHHHHHHHE YWGDMDTHGFTILNRLRGYFGHVTSVLMDQDTLLAHRVHWDEESKPTRQALEHLTTEEAA EECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH VYDDLRYDRHQPRLRLEQERIGFRWVCDRLACLLSAPPQDA HHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA