Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682690
Identifier: 182682690
GI number: 182682690
Start: 2477642
End: 2477908
Strand: Reverse
Name: 182682690
Synonym: XfasM23_2181
Alternate gene names: NA
Gene position: 2477908-2477642 (Counterclockwise)
Preceding gene: 182682691
Following gene: 182682689
Centisome position: 97.72
GC content: 54.68
Gene sequence:
>267_bases ATGATGAGCGGCCAAGGCCGCGGCGGCATGATCAAGCAGGGGCGTTCTTCTTGGGCGCCATTGATCGTGAGATTGTCCGG CAACGGTCAAGACAACGCCTTGCAAGCGGCGGGCAGTTTCAATGATCAGCAAGGGGTTGCTCATGCCACAGCGGGGTACG CAAAAGACGCTACGCAACGCTGCGGCCAGCAGCTTGATGTGGTAGCAGTCTCTCTAACAATGGTGAAAGTAATGCAGCAA AAAAATAGCGGAAAAAAACGGGGATGA
Upstream 100 bases:
>100_bases ATATCAAGGCGCTCAATCGTGACATTGCCCGCATCGTTGCAAGACAAGCCGAATTGAGGAAGCAGATTGATGCCATCGTA GCTGATCTAGAAGGGGAGCC
Downstream 100 bases:
>100_bases GTCGGATTGATGAGTTGATTGCAGCGCTTTGTCCGGAGGGGGTGGGGTTCATGAGAGTTGGTGAGTTGCTTGAAAGAACC TCAAATATCCGATGGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MMSGQGRGGMIKQGRSSWAPLIVRLSGNGQDNALQAAGSFNDQQGVAHATAGYAKDATQRCGQQLDVVAVSLTMVKVMQQ KNSGKKRG
Sequences:
>Translated_88_residues MMSGQGRGGMIKQGRSSWAPLIVRLSGNGQDNALQAAGSFNDQQGVAHATAGYAKDATQRCGQQLDVVAVSLTMVKVMQQ KNSGKKRG >Mature_88_residues MMSGQGRGGMIKQGRSSWAPLIVRLSGNGQDNALQAAGSFNDQQGVAHATAGYAKDATQRCGQQLDVVAVSLTMVKVMQQ KNSGKKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9236; Mature: 9236
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSGQGRGGMIKQGRSSWAPLIVRLSGNGQDNALQAAGSFNDQQGVAHATAGYAKDATQR CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCHHHHCCCCHHHHHH CGQQLDVVAVSLTMVKVMQQKNSGKKRG CCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMSGQGRGGMIKQGRSSWAPLIVRLSGNGQDNALQAAGSFNDQQGVAHATAGYAKDATQR CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCHHHHCCCCHHHHHH CGQQLDVVAVSLTMVKVMQQKNSGKKRG CCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA