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The map label for this gene is mdoD

Identifier: 182682654

GI number: 182682654

Start: 2419109

End: 2420713

Strand: Reverse

Name: mdoD

Synonym: XfasM23_2144

Alternate gene names: 182682654

Gene position: 2420713-2419109 (Counterclockwise)

Preceding gene: 182682655

Following gene: 182682653

Centisome position: 95.47

GC content: 50.78

Gene sequence:

>1605_bases
ATGTATAGACGAGATTTCTTAAAAAGCGTTACTGCTGCTTGGGTTGCGTTTGGTTTACCTAACCCTCTTGGGGGAGCGTT
CGCTACCAACAGGGTGATTCCTTTGCGTCGCTTGGGTCAATCTCAGCGTTTTGACTATGAATGGTTAAAGGAGCGCGCTC
GCGCCCTCGCTGCGACGCCTTATCATTCACGTAAACGTGTGTTGCCGACACCACTAGAGAGGCTAAGTTGGGATCAGTAC
CAATCAATTCGTTATCGCCAGGATCATGCATTGTGGGCTGATAGTGATGCTCATTTCCAAGTCAAGTTTTTCCACCTTGG
TCTGTATTTCCATAGCCCGGTGCGGATGTACGAAGTGGTGGATGGTATGGCGCAGGAGTTAGCTTATGATCCCGCGGCTT
TTGACTATGGTAGCAGTGGCTTAAATGGGAAGGGGTTGCCCAAGGATCTGGGTTTCGCAGGATTCCGATTGAATACTCGT
AAGGATATTGATCGAGATTTTGCTGCCTTCCTAGGGGCAAGCTACTTTCGCGCTGTGGGACAGGAGGGACAGTACGGCCA
GTCTGCGCGTGGGTTAGCGGTCAATACAGGGAGTAGCGGACCAGAAGAGTTCCCGGACTTTATCGCTTATTACCTTGAGC
AGCCGACTGCGGATGCGGATACCGTCGTGATGTATGGACTTTTGGATTCGCCGAGTATTGCTGGCGCTTATCGTTTTTCC
ATCACTCACGCAGATGTCCTACGGATGGACATCGACAGCGCACTGTATCCGCGTGAAACCATTGAGCGACTCGGGATTGC
TCCATGTACCAGTATGTACCAAGTGGGTGAGAATGATCGGCGCATGGGTTGGGATTGGCGTCCAGAGATTCATGACACGG
ATGGATTGTTTCTTTGGACAGGGAATGGTGAGTGGATTTGGCGGCCCCTATGTAATCCGCTACATCTACGCTTCAACATG
TTTCTTGACAACAATCCACGCGGTTTTGGTCTTTTGCAGCGTGATCGTGATTTCGATCACTATCAAGACGATGGTGTGTT
TTACGAGAAGCGTCCTTGCCTATGGGTTGAGCCTAAACATGGCTGGGGTGAGGGGTCTGTCCAGTTGGTGGAGATCCCAA
CATTCGATGAAACCTTCGATAACATCGTTGCCTTCTGGAATCCACGGAATAAACCTCACCCTGGTCAGGAACTACTGTTC
GGGTATCGGTTGTATTGGGGGGCTTTTCCGCCTGTATCTTCTTCGTTGGCGTATTGTGTGGCCACGCGTACAGGCTTAGG
TGGTGTGGTTGGTCAGAAGCGTAAATACTTCTCGTGGCGGTTTGCTGTGGATTTTGTTGGTGGCAAATTGGCTGCCCTCG
CCAGGGTTCATGATGTGAGTGTGGAACCAGTACTGCATATGACACGTGGTCGCCCTGAGATCGTCTCGGCACGACCATTG
CATGAGATCCGTGGCTATCGTGTCATGTTCGACGTAGTGCCCTTGGAGGACAGTGCTCAACAGATTGACATCCGTTTGTA
CTTGCGTGATACCAATGGGGAGCCATTAACAGAAACGTGGCTCTATCAATGGGTACCACCGATATTGGAGGAGCGCAAGT
ATTAA

Upstream 100 bases:

>100_bases
TTTTTTGACTGGCCAGTGGATCGTTTATTGTGTTCATTTATCGATCTATGCCTCATTCTGCTGCAGTTATGATTCACATA
TCTTTTGTGCAGCTTTGCTC

Downstream 100 bases:

>100_bases
TCGGATGAAGATTGATTACGACAGTACGGTATGCCGAGAATGACTTGATTCCGTAACGTTGCGGGTGATGTCGAGAACTA
TCGCAATAGTTAATTGATTC

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MYRRDFLKSVTAAWVAFGLPNPLGGAFATNRVIPLRRLGQSQRFDYEWLKERARALAATPYHSRKRVLPTPLERLSWDQY
QSIRYRQDHALWADSDAHFQVKFFHLGLYFHSPVRMYEVVDGMAQELAYDPAAFDYGSSGLNGKGLPKDLGFAGFRLNTR
KDIDRDFAAFLGASYFRAVGQEGQYGQSARGLAVNTGSSGPEEFPDFIAYYLEQPTADADTVVMYGLLDSPSIAGAYRFS
ITHADVLRMDIDSALYPRETIERLGIAPCTSMYQVGENDRRMGWDWRPEIHDTDGLFLWTGNGEWIWRPLCNPLHLRFNM
FLDNNPRGFGLLQRDRDFDHYQDDGVFYEKRPCLWVEPKHGWGEGSVQLVEIPTFDETFDNIVAFWNPRNKPHPGQELLF
GYRLYWGAFPPVSSSLAYCVATRTGLGGVVGQKRKYFSWRFAVDFVGGKLAALARVHDVSVEPVLHMTRGRPEIVSARPL
HEIRGYRVMFDVVPLEDSAQQIDIRLYLRDTNGEPLTETWLYQWVPPILEERKY

Sequences:

>Translated_534_residues
MYRRDFLKSVTAAWVAFGLPNPLGGAFATNRVIPLRRLGQSQRFDYEWLKERARALAATPYHSRKRVLPTPLERLSWDQY
QSIRYRQDHALWADSDAHFQVKFFHLGLYFHSPVRMYEVVDGMAQELAYDPAAFDYGSSGLNGKGLPKDLGFAGFRLNTR
KDIDRDFAAFLGASYFRAVGQEGQYGQSARGLAVNTGSSGPEEFPDFIAYYLEQPTADADTVVMYGLLDSPSIAGAYRFS
ITHADVLRMDIDSALYPRETIERLGIAPCTSMYQVGENDRRMGWDWRPEIHDTDGLFLWTGNGEWIWRPLCNPLHLRFNM
FLDNNPRGFGLLQRDRDFDHYQDDGVFYEKRPCLWVEPKHGWGEGSVQLVEIPTFDETFDNIVAFWNPRNKPHPGQELLF
GYRLYWGAFPPVSSSLAYCVATRTGLGGVVGQKRKYFSWRFAVDFVGGKLAALARVHDVSVEPVLHMTRGRPEIVSARPL
HEIRGYRVMFDVVPLEDSAQQIDIRLYLRDTNGEPLTETWLYQWVPPILEERKY
>Mature_534_residues
MYRRDFLKSVTAAWVAFGLPNPLGGAFATNRVIPLRRLGQSQRFDYEWLKERARALAATPYHSRKRVLPTPLERLSWDQY
QSIRYRQDHALWADSDAHFQVKFFHLGLYFHSPVRMYEVVDGMAQELAYDPAAFDYGSSGLNGKGLPKDLGFAGFRLNTR
KDIDRDFAAFLGASYFRAVGQEGQYGQSARGLAVNTGSSGPEEFPDFIAYYLEQPTADADTVVMYGLLDSPSIAGAYRFS
ITHADVLRMDIDSALYPRETIERLGIAPCTSMYQVGENDRRMGWDWRPEIHDTDGLFLWTGNGEWIWRPLCNPLHLRFNM
FLDNNPRGFGLLQRDRDFDHYQDDGVFYEKRPCLWVEPKHGWGEGSVQLVEIPTFDETFDNIVAFWNPRNKPHPGQELLF
GYRLYWGAFPPVSSSLAYCVATRTGLGGVVGQKRKYFSWRFAVDFVGGKLAALARVHDVSVEPVLHMTRGRPEIVSARPL
HEIRGYRVMFDVVPLEDSAQQIDIRLYLRDTNGEPLTETWLYQWVPPILEERKY

Specific function: Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI145693128, Length=551, Percent_Identity=44.8275862068966, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1787286, Length=493, Percent_Identity=37.3225152129817, Blast_Score=324, Evalue=9e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 61349; Mature: 61349

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRRDFLKSVTAAWVAFGLPNPLGGAFATNRVIPLRRLGQSQRFDYEWLKERARALAATP
CCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCC
YHSRKRVLPTPLERLSWDQYQSIRYRQDHALWADSDAHFQVKFFHLGLYFHSPVRMYEVV
CCCCCCCCCCCHHHCCCHHHHHHHCCCCCCEEECCCCEEEEEEEEEEEEECCCHHHHHHH
DGMAQELAYDPAAFDYGSSGLNGKGLPKDLGFAGFRLNTRKDIDRDFAAFLGASYFRAVG
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHC
QEGQYGQSARGLAVNTGSSGPEEFPDFIAYYLEQPTADADTVVMYGLLDSPSIAGAYRFS
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEE
ITHADVLRMDIDSALYPRETIERLGIAPCTSMYQVGENDRRMGWDWRPEIHDTDGLFLWT
EEHHHHEEECCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
GNGEWIWRPLCNPLHLRFNMFLDNNPRGFGLLQRDRDFDHYQDDGVFYEKRPCLWVEPKH
CCCCEEEECCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCC
GWGEGSVQLVEIPTFDETFDNIVAFWNPRNKPHPGQELLFGYRLYWGAFPPVSSSLAYCV
CCCCCCEEEEECCCCHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEEE
ATRTGLGGVVGQKRKYFSWRFAVDFVGGKLAALARVHDVSVEPVLHMTRGRPEIVSARPL
EECCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHCCCCCCEECCCCH
HEIRGYRVMFDVVPLEDSAQQIDIRLYLRDTNGEPLTETWLYQWVPPILEERKY
HHHCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MYRRDFLKSVTAAWVAFGLPNPLGGAFATNRVIPLRRLGQSQRFDYEWLKERARALAATP
CCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCC
YHSRKRVLPTPLERLSWDQYQSIRYRQDHALWADSDAHFQVKFFHLGLYFHSPVRMYEVV
CCCCCCCCCCCHHHCCCHHHHHHHCCCCCCEEECCCCEEEEEEEEEEEEECCCHHHHHHH
DGMAQELAYDPAAFDYGSSGLNGKGLPKDLGFAGFRLNTRKDIDRDFAAFLGASYFRAVG
HHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHC
QEGQYGQSARGLAVNTGSSGPEEFPDFIAYYLEQPTADADTVVMYGLLDSPSIAGAYRFS
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEE
ITHADVLRMDIDSALYPRETIERLGIAPCTSMYQVGENDRRMGWDWRPEIHDTDGLFLWT
EEHHHHEEECCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEC
GNGEWIWRPLCNPLHLRFNMFLDNNPRGFGLLQRDRDFDHYQDDGVFYEKRPCLWVEPKH
CCCCEEEECCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCEEEECCCC
GWGEGSVQLVEIPTFDETFDNIVAFWNPRNKPHPGQELLFGYRLYWGAFPPVSSSLAYCV
CCCCCCEEEEECCCCHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHEEEE
ATRTGLGGVVGQKRKYFSWRFAVDFVGGKLAALARVHDVSVEPVLHMTRGRPEIVSARPL
EECCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHCCCCCCEECCCCH
HEIRGYRVMFDVVPLEDSAQQIDIRLYLRDTNGEPLTETWLYQWVPPILEERKY
HHHCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]