Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682638
Identifier: 182682638
GI number: 182682638
Start: 2398378
End: 2398905
Strand: Reverse
Name: 182682638
Synonym: XfasM23_2126
Alternate gene names: NA
Gene position: 2398905-2398378 (Counterclockwise)
Preceding gene: 182682640
Following gene: 182682637
Centisome position: 94.61
GC content: 58.14
Gene sequence:
>528_bases ATGAGTCGAGGGCATTGCATTCTGTCGCATGGTTTTGAGAGTAGTCCGGATGCGAACAAAGTCACTGCGTTGGCGGAGGT CGCTGAGCGCTTGGGGTGGAGTCATGTGCGTCCTGACTATAGTGATCTGGATGCACGGCGGGAGGTCAGTCTGTTGGGTG ATGTGCCGGGGCGCTTGGAGCGTTTGCTGGCTTTGGCGCGTGATGCTGTTACGCGTGGTCCAGTGGTGTTGGCGGGATCT AGTCTCGGTGCTTATATATCGGGACGGGTGTCGTTGCAGGTGCCTGTTCGCGGTCTGTTTTTGATGGTGCCGCCGATATG TATCTCTCAGATGCCGGCGTTGGATGCGGCGTCAGTGCCGATTTCAATTGTGCATGCTTGGCGTGATGAGCTGATTCCTG CTGTGGAGGTGATCGCTTGGGCACAGGCGCGTGCAGCGCGGTTGTTGGTGGTGGACGATACGCATCGTTTGGGGCATCAC GTTGATGCTGCGGCCCAGGCGTTTGCGGCATTGCTTGCGACGCTGTAG
Upstream 100 bases:
>100_bases GGGCACTGTTTAGTTTGCTGGGTGTACACGGTGTGTGGCTTCGGTGGCCTGAGTGTGTTTGTGGTGGTGGGATAGGTGTT GTTGACGTTGTGGAGGAACG
Downstream 100 bases:
>100_bases ACGTTTTAATGGTGTGATCGGGGACAGACGGTGTGCGATTGGGCCGTTTCTGTTTTTTCTGTGGGCAGTCACGTGATGGT GATGTTGTTCTGGTGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Fold Superfamily Hydrolase
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSRGHCILSHGFESSPDANKVTALAEVAERLGWSHVRPDYSDLDARREVSLLGDVPGRLERLLALARDAVTRGPVVLAGS SLGAYISGRVSLQVPVRGLFLMVPPICISQMPALDAASVPISIVHAWRDELIPAVEVIAWAQARAARLLVVDDTHRLGHH VDAAAQAFAALLATL
Sequences:
>Translated_175_residues MSRGHCILSHGFESSPDANKVTALAEVAERLGWSHVRPDYSDLDARREVSLLGDVPGRLERLLALARDAVTRGPVVLAGS SLGAYISGRVSLQVPVRGLFLMVPPICISQMPALDAASVPISIVHAWRDELIPAVEVIAWAQARAARLLVVDDTHRLGHH VDAAAQAFAALLATL >Mature_174_residues SRGHCILSHGFESSPDANKVTALAEVAERLGWSHVRPDYSDLDARREVSLLGDVPGRLERLLALARDAVTRGPVVLAGSS LGAYISGRVSLQVPVRGLFLMVPPICISQMPALDAASVPISIVHAWRDELIPAVEVIAWAQARAARLLVVDDTHRLGHHV DAAAQAFAALLATL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18705; Mature: 18574
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGHCILSHGFESSPDANKVTALAEVAERLGWSHVRPDYSDLDARREVSLLGDVPGRLE CCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH RLLALARDAVTRGPVVLAGSSLGAYISGRVSLQVPVRGLFLMVPPICISQMPALDAASVP HHHHHHHHHHCCCCEEEECCCCCCEEECEEEEEECCCHHEECCCHHHHHCCCCCCCCCCC ISIVHAWRDELIPAVEVIAWAQARAARLLVVDDTHRLGHHVDAAAQAFAALLATL HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRGHCILSHGFESSPDANKVTALAEVAERLGWSHVRPDYSDLDARREVSLLGDVPGRLE CCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH RLLALARDAVTRGPVVLAGSSLGAYISGRVSLQVPVRGLFLMVPPICISQMPALDAASVP HHHHHHHHHHCCCCEEEECCCCCCEEECEEEEEECCCHHEECCCHHHHHCCCCCCCCCCC ISIVHAWRDELIPAVEVIAWAQARAARLLVVDDTHRLGHHVDAAAQAFAALLATL HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA