Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682556
Identifier: 182682556
GI number: 182682556
Start: 2293144
End: 2293833
Strand: Reverse
Name: 182682556
Synonym: XfasM23_2044
Alternate gene names: NA
Gene position: 2293833-2293144 (Counterclockwise)
Preceding gene: 182682557
Following gene: 182682555
Centisome position: 90.46
GC content: 55.07
Gene sequence:
>690_bases ATGCCTGCCATCAAGAGGGGCATTTCCCTCTTGCTGCTCGGAGGCGTTCCCTGGTTTGGGATCGCTGCAGATCGTTATGA AGCGCCTCCTGACGTAGTGCGTTGTGAGTCCCACGATCAAGAACGCGTCCATTGCACCATGCTGACCACGCATGGAGTGC AGCTCGTGCGCCAACTCTCCGTAAACAGTTGCGAGCATGGCAGTCAGTGGGATGTGGACCCAGAGGGCGTCTGGGTAGAG CAGGGGTGCCAGGCCGAATTTGCTCCCCTGCCTGATCCTGTGCATCCACAACGGCGGATATTGCGCTGCGCCTCAGATGG TTCTGTCGTCAGTTGCCCCGTGGTGCTACGCGGTGTCCCTGTCCGCTTACTGCGCCAACTTTCCTTATTTCCCTGCAAGA AAAATGTTACCTGGGGGAGAAAACACCATGAAATCTGGGTGTCCAGTGGCTGCAAAGGTGAATTTGAACTCGGTGCCGAA GATGGATCTGGATTTGTTGATATGCCGTGGCGCTTGATTTGTGAATCCAAAAAACGTCAACGCATGAGCTGTGGCACATC GGTACAGCACGAGGTGAGTGTATTCCTGCAACTCTCCACCACACCCTGCGAAAAAGATCGTAATTGGGGCTGGGATGCTG ACCGAATCTGGGTCGATGGAGGCTGCCGTGCCGAATTTCTCGTCTATTGA
Upstream 100 bases:
>100_bases CTAAAGGACTTTTGTCTCACCATGTGAGTTCCTAATTGATTTGCTTATGCCCCCAATTCTTGGATCCCAATGCAGCAGCA CACACCTTCTTTCTAGGGGG
Downstream 100 bases:
>100_bases AACCGCTCTCCATCTGCAAACCGCATCCCACCGACACCAACACCTGTGTAGCGTCACCTGATCGCACACACCGACCTTTC CTATTCTCGACAGGCCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPAIKRGISLLLLGGVPWFGIAADRYEAPPDVVRCESHDQERVHCTMLTTHGVQLVRQLSVNSCEHGSQWDVDPEGVWVE QGCQAEFAPLPDPVHPQRRILRCASDGSVVSCPVVLRGVPVRLLRQLSLFPCKKNVTWGRKHHEIWVSSGCKGEFELGAE DGSGFVDMPWRLICESKKRQRMSCGTSVQHEVSVFLQLSTTPCEKDRNWGWDADRIWVDGGCRAEFLVY
Sequences:
>Translated_229_residues MPAIKRGISLLLLGGVPWFGIAADRYEAPPDVVRCESHDQERVHCTMLTTHGVQLVRQLSVNSCEHGSQWDVDPEGVWVE QGCQAEFAPLPDPVHPQRRILRCASDGSVVSCPVVLRGVPVRLLRQLSLFPCKKNVTWGRKHHEIWVSSGCKGEFELGAE DGSGFVDMPWRLICESKKRQRMSCGTSVQHEVSVFLQLSTTPCEKDRNWGWDADRIWVDGGCRAEFLVY >Mature_228_residues PAIKRGISLLLLGGVPWFGIAADRYEAPPDVVRCESHDQERVHCTMLTTHGVQLVRQLSVNSCEHGSQWDVDPEGVWVEQ GCQAEFAPLPDPVHPQRRILRCASDGSVVSCPVVLRGVPVRLLRQLSLFPCKKNVTWGRKHHEIWVSSGCKGEFELGAED GSGFVDMPWRLICESKKRQRMSCGTSVQHEVSVFLQLSTTPCEKDRNWGWDADRIWVDGGCRAEFLVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25752; Mature: 25621
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIKRGISLLLLGGVPWFGIAADRYEAPPDVVRCESHDQERVHCTMLTTHGVQLVRQLS CCCHHHCCEEEEECCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHHHH VNSCEHGSQWDVDPEGVWVEQGCQAEFAPLPDPVHPQRRILRCASDGSVVSCPVVLRGVP CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHEECCCCCEEECCCEECCCC VRLLRQLSLFPCKKNVTWGRKHHEIWVSSGCKGEFELGAEDGSGFVDMPWRLICESKKRQ HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEECCCHHEEHHHHHHH RMSCGTSVQHEVSVFLQLSTTPCEKDRNWGWDADRIWVDGGCRAEFLVY HHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEC >Mature Secondary Structure PAIKRGISLLLLGGVPWFGIAADRYEAPPDVVRCESHDQERVHCTMLTTHGVQLVRQLS CCHHHCCEEEEECCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEEEEHHHHHHHHHHH VNSCEHGSQWDVDPEGVWVEQGCQAEFAPLPDPVHPQRRILRCASDGSVVSCPVVLRGVP CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHEECCCCCEEECCCEECCCC VRLLRQLSLFPCKKNVTWGRKHHEIWVSSGCKGEFELGAEDGSGFVDMPWRLICESKKRQ HHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCEECCCHHEEHHHHHHH RMSCGTSVQHEVSVFLQLSTTPCEKDRNWGWDADRIWVDGGCRAEFLVY HHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA