| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682551
Identifier: 182682551
GI number: 182682551
Start: 2283347
End: 2283967
Strand: Direct
Name: 182682551
Synonym: XfasM23_2039
Alternate gene names: NA
Gene position: 2283347-2283967 (Clockwise)
Preceding gene: 182682550
Following gene: 182682566
Centisome position: 90.05
GC content: 58.45
Gene sequence:
>621_bases ATGGCGTACAGATTCGGCCAAAAAAACAACAACGCCGATAGGCTCTTGGTAGTTTGGAATGCTCCGTCAGTACGGCAAAT CAAGTTCCGGTGGCGTCAGCCGGGCGGCGGTGAGGTTCAGGGCACCGATGATGTCAATGGCCGCATTTCCATCGCTGATG ATGAAGGCATTAGTGGTGTTACGCAGGGCGGCGACGCCAATGTCCATGCACTGATGGGTGGCGATGACGGCGGTGTGGGT CTGGCCGTCGATGGTTTCATCGCGGTGAGTGAGTGCCTGGACTTGGAGGGCAAGGTGGTCGCCGTAGAAGTTTCCAGTGC CGAGGTTGTCGATGATGCCGCGATTGGTCAGGGTATCGGTGGCGGTAAATTAGGCACAGTCGCCGACCACTTCCAGGTAA CCATGAAGTTAGGTAGGAGTCTGGCTGTTGACTTCATTGAGGATGACTTGGGCGGTGGCGATGCCAGCGATGCTCACCCA GCCGAGGCTGAGCCAGAGGCCAAAGATGATGGATGTGGCACGCGCGGTGGGAGTTGCGCTGCAGGAGCAGGACCTGCGGT ACCGCCGGGTGCGGTGGCAAGTGCTGAGGTGACTTGCCACAAACGCAGAGCACAGTTGTAG
Upstream 100 bases:
>100_bases ATTAATAGGGATGTAACCGGTTTGCACCGGTTAATTCGGGCGGTAAAGATCAGACTTACGAAGCCGGAAGCCGATAACCT GCCGCATCGCTCACCGGCAT
Downstream 100 bases:
>100_bases ATGAGACGCTAGAGATCCTTGTTCATGGTATCCCCATTAAGTGAAATGTTTTGAGAGCGGTATGTGTTTAGAAGGACCAG TTCAAGCTGAATCCGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAYRFGQKNNNADRLLVVWNAPSVRQIKFRWRQPGGGEVQGTDDVNGRISIADDEGISGVTQGGDANVHALMGGDDGGVG LAVDGFIAVSECLDLEGKVVAVEVSSAEVVDDAAIGQGIGGGKLGTVADHFQVTMKLGRSLAVDFIEDDLGGGDASDAHP AEAEPEAKDDGCGTRGGSCAAGAGPAVPPGAVASAEVTCHKRRAQL
Sequences:
>Translated_206_residues MAYRFGQKNNNADRLLVVWNAPSVRQIKFRWRQPGGGEVQGTDDVNGRISIADDEGISGVTQGGDANVHALMGGDDGGVG LAVDGFIAVSECLDLEGKVVAVEVSSAEVVDDAAIGQGIGGGKLGTVADHFQVTMKLGRSLAVDFIEDDLGGGDASDAHP AEAEPEAKDDGCGTRGGSCAAGAGPAVPPGAVASAEVTCHKRRAQL >Mature_205_residues AYRFGQKNNNADRLLVVWNAPSVRQIKFRWRQPGGGEVQGTDDVNGRISIADDEGISGVTQGGDANVHALMGGDDGGVGL AVDGFIAVSECLDLEGKVVAVEVSSAEVVDDAAIGQGIGGGKLGTVADHFQVTMKLGRSLAVDFIEDDLGGGDASDAHPA EAEPEAKDDGCGTRGGSCAAGAGPAVPPGAVASAEVTCHKRRAQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20882; Mature: 20751
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRFGQKNNNADRLLVVWNAPSVRQIKFRWRQPGGGEVQGTDDVNGRISIADDEGISGV CCEECCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCC TQGGDANVHALMGGDDGGVGLAVDGFIAVSECLDLEGKVVAVEVSSAEVVDDAAIGQGIG CCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCC GGKLGTVADHFQVTMKLGRSLAVDFIEDDLGGGDASDAHPAEAEPEAKDDGCGTRGGSCA CCCCCCHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAGPAVPPGAVASAEVTCHKRRAQL CCCCCCCCCCCCCEEEEEEHHHHCCC >Mature Secondary Structure AYRFGQKNNNADRLLVVWNAPSVRQIKFRWRQPGGGEVQGTDDVNGRISIADDEGISGV CEECCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCC TQGGDANVHALMGGDDGGVGLAVDGFIAVSECLDLEGKVVAVEVSSAEVVDDAAIGQGIG CCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCC GGKLGTVADHFQVTMKLGRSLAVDFIEDDLGGGDASDAHPAEAEPEAKDDGCGTRGGSCA CCCCCCHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAGPAVPPGAVASAEVTCHKRRAQL CCCCCCCCCCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA