Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is coaE
Identifier: 182682540
GI number: 182682540
Start: 2269449
End: 2270072
Strand: Reverse
Name: coaE
Synonym: XfasM23_2028
Alternate gene names: 182682540
Gene position: 2270072-2269449 (Counterclockwise)
Preceding gene: 182682541
Following gene: 182682534
Centisome position: 89.52
GC content: 53.69
Gene sequence:
>624_bases ATGAGTGTCTATGCGGTTGGTCTCACTGGAGGGGTCGCTTGCGGTAAGAGCTTGCTGGCGCAGCTGTTCGAGGCGTTAAA CACGACGGTTGTTGATGCAGATACAATTGCCCGCCAAGTGGTTGAGCCTGGTCCAGTTCTCAATTGCATCGTTGCTAGGT TTGGTAGCAAGATTTTGCGGGCTGATGGTTGTCTTGATCGTCGTTTTTTGCGGCAACGTGTATTTGCCGATGTGGCCGAA CGAAAGGCGTTGGAGGCTATTGTCCATCCGGTGATCCGAGCTAGGTTGAAGCAGGCGGCGGCGGCGGCGGCAGGTCCATA TGTGCTAGTCGTCATTCCACTTTTGGCCGAGGCTGGTGGTCGCATTGGATACCCTTGGTTGCAGCGCATTCTTGTCGTGG ATGCTATACCGGAAGTACAACACGCACGACTGATGCAGCGTGATTCAATTGACGCTGAGCAGGCTTCCTTGATGATCGCG GCCCAGATTGGCCGCAAAGAGCGCTTAGCTATAGCCGACGATATTGTGTTTAACGATGGAGATCCCGCGCATTTGGGCGG GCAGGTATGCAATTTGGACGCGCGCTATCGCGCTCTTGCTTCTGTTTTTTCTGATGTTGATTAG
Upstream 100 bases:
>100_bases GACCTTATCTGGCAGTTGGTGGATGGATCGTGTTCTTTTTCGGCGATCAGATCATCCATGCTTATCTGGAGCTATTAAGT ATCGGGTGAGGTTGGAGTTG
Downstream 100 bases:
>100_bases TATCAATTGTTGGCATTACCGAGAGACATCAATTCATCATTGTGACACTTAAATAGTGTACGGTGGTGGATGTTATTTGC GGTTGTTATCTGCAAGAGTA
Product: dephospho-CoA kinase
Products: NA
Alternate protein names: Dephosphocoenzyme A kinase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILRADGCLDRRFLRQRVFADVAE RKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIA AQIGRKERLAIADDIVFNDGDPAHLGGQVCNLDARYRALASVFSDVD
Sequences:
>Translated_207_residues MSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILRADGCLDRRFLRQRVFADVAE RKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIA AQIGRKERLAIADDIVFNDGDPAHLGGQVCNLDARYRALASVFSDVD >Mature_206_residues SVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILRADGCLDRRFLRQRVFADVAER KALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGGRIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIAA QIGRKERLAIADDIVFNDGDPAHLGGQVCNLDARYRALASVFSDVD
Specific function: Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A [H]
COG id: COG0237
COG function: function code H; Dephospho-CoA kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DPCK (dephospho-CoA kinase) domain [H]
Homologues:
Organism=Homo sapiens, GI191252797, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI191252795, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI110227607, Length=167, Percent_Identity=32.3353293413174, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI110227605, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI110227603, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI110227601, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI205277394, Length=172, Percent_Identity=31.9767441860465, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786292, Length=201, Percent_Identity=46.2686567164179, Blast_Score=171, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17554944, Length=196, Percent_Identity=33.6734693877551, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6320402, Length=197, Percent_Identity=37.0558375634518, Blast_Score=88, Evalue=8e-19, Organism=Drosophila melanogaster, GI24644728, Length=182, Percent_Identity=28.021978021978, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24658602, Length=184, Percent_Identity=31.5217391304348, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001977 [H]
Pfam domain/function: PF01121 CoaE [H]
EC number: =2.7.1.24 [H]
Molecular weight: Translated: 22253; Mature: 22122
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: PS01294 COAE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILR CCEEEEECCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH ADGCLDRRFLRQRVFADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC RIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIAAQIGRKERLAIADDIVFNDG CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHEEECCC DPAHLGGQVCNLDARYRALASVFSDVD CCHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SVYAVGLTGGVACGKSLLAQLFEALNTTVVDADTIARQVVEPGPVLNCIVARFGSKILR CEEEEECCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH ADGCLDRRFLRQRVFADVAERKALEAIVHPVIRARLKQAAAAAAGPYVLVVIPLLAEAGG HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC RIGYPWLQRILVVDAIPEVQHARLMQRDSIDAEQASLMIAAQIGRKERLAIADDIVFNDG CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHEEECCC DPAHLGGQVCNLDARYRALASVFSDVD CCHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]