Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is cbg-1 [H]
Identifier: 182682443
GI number: 182682443
Start: 2153217
End: 2155865
Strand: Direct
Name: cbg-1 [H]
Synonym: XfasM23_1929
Alternate gene names: 182682443
Gene position: 2153217-2155865 (Clockwise)
Preceding gene: 182682442
Following gene: 182682445
Centisome position: 84.92
GC content: 62.67
Gene sequence:
>2649_bases ATGCCATTGCCCATTGCAGCCCCCCCCATACTGGCAAGCACCCTCACCCTGTTACTCGCCACAACACCCACCGCTGCGGC ACTCACCCCCGAACAACACGCCGCCGCCCTAGTGGCACAGATGACCCGCCAAGAGAAAATTGCGCAAACAATGAACGCCG CCCCGGCCATCCCACGCCTGGGCATCCCCGCCTACGACTGGTGGAGCGAAGGACTGCACGGCATCGCCCGCAACGGCTAC GCCACCGTCTTTCCCCAAGCCATTGGCCTGGCCGCAAGCTGGAACACCGACCTACTGCAACACGTCGGCACCGTCACCTC CACCGAAGCCCGCGCCAAATTCAACCTCACCGGCGGCCCCGGCAAAGACCACCCCCGCTATGCAGGACTCACCCTCTGGT CCCCTAACATCAACATTTTCCGTGACCCACGTTGGGGCCGCGGCATGGAAACCTACGGTGAAGACCCCTACCTCACCAGC CAACTTGCAGTGAGCTTCATCCGTGGCCTGCAAGGGGACACCCCCGACCACCCACGGACCATCGCCACCCCCAAACACTT CGCCGTACACAGTGGCCCAGAACAAGGACGCCACAGCTTTGACGTGGATGTCTCCGCATACGACCTGGAAGCGACCTACA CCCCCGCATTCCGCGCCGCGATTGTCGACGGCCATGCTGGCTCAGTGATGTGTGCCTACAACGCCCTACATGGCACACCC GCATGTGCCTCCGACTGGCTACTCAACACACGTCTGCGCAACGACTGGGGCTTCAACGGCTTTGTGGTCTCCGACTGCGA CGCAATCGAAGACATGACCCGATTCCATTTCTTCCGTCAAGACAACGCCAGCGCCTCAGCCGCCGCACTCAAGAGCGGCA ACGACCTCAACTGCGGCAACACCTATCGCGACCTCAACCAAGCCATCGCGCGCGGCGACATTGATGAATCAACACTGGAC CAGGCACTCATCCGCCTCTTCACCGCACGCCAGCGCCTGGGTACGCTGCAACCACGCGAGCACGACCCCTATGCCGCCAT CGGCATCAAGCACATCGATACCCCAGCGCACCGCGCCCTTGCACTACAAGCGGCCGCCCAGTCACTCGTCCTCTTGAAAA ACTCCGGCAACACACTCCCGTTACCCCCCGAGACCACATTAGCAGTCCTCGGCCCGGACGCCGACTCACTCACCGCCCTG GAAGCCAATTACCAAGGCACCTCCTCAACCCCAGTGACCCCACTGACCGGCCTACGGACCCGTTTCGGTACCGCCAAAGT CCACTATGCACAAGGCGCCTCCCTGGCGCCCGGCGTCCCAAACACCATCCCGGAAACCGCACTGCGCAACCACGGCCACC CCGGACTGAAAGGGGAATATTTCGACACGATTGACTTTTCCGGCCCACCGCACCTAGTGCGTCAAGATCGCATCATCGCC TTCAACTGGGACCACGTCGCCCCCGCACCAGGCATGAACCCCCACCGCTACGCGGTGCGCTGGACCGGCGAACTCCTCCC CCCCGGCCCCGGCACCTACACCTTCGCCGTGCATGTCGCGCGCTGCTTCGACTGCAACGGCCGCGACCCGATACGCCTGT ACATCGACGATCGCCAAATCATCCCCGACAACGCCACAGCGGCCCAAGCGACCACGGCCCCCCAGCAGACAAATAACACA CACCTTGAAGCAACCCTTCACTTTACCGATACCCGCCCACACCACATCCGCCTGGACATGGAACACCGTGGCGAAGACCA AGGCGTGCGTTTGGAATGGCTAGCCCCGGAAACGCCACAACTGGCTGAAGCCGAACGTGCGGTCGCACATGCCGATGCCA TCGTCGCCTTCGTCGGCCTCTCCCCTGAGGTGGAAGGCGAAGAATTGCACATCGACACCCCCGGGTTCAGCGGCGGCGAC CGCACCACGATTGACCTGCCCGCCACCCAAGAAACCCTGCTGCAACATGTGAAGACCACAGGCAAACCCCTGATCGTCGT CCTCATGAGCGGCAGCGCCGTTGCACTGAATTGGGCACAACACCATGCCGACGCCATCCTCGCCGCATGGTATCCCGGAC AATCTGGAGGCACCGCGATCGCACAAGCCCTGGCTGGTGACGTCAATCCCGGCGGCCGTCTGCCGGTGACCTTCTACCGC TCGACCCAGGACCTGCCCCCCTACATCAGCTACGACATGACCGGACGCACCTATCGCTACTTCAAAGGCCAACCGCTCTA TCCATTTGGCTACGGCCTGAGCTATACCCAATTCGCCTACGAAGCACCGCAGCTCTCCACCGCAACCCTGAAAGCGGGCA ACACCTTGACCGTCACTACCCACGTCCGCAATACCGGCACCCGGGCTGGTGATGAAGTCGTGCAACTTTATCTAGAACCC CCGTACTCCCCACAGGCACCGCTGCGCAGCCTGGTCGGCTTCAAAAGAGTGACATTGCGCCCTGGCGAATCCCGCCTGCT GACCTTCACACTAGACGCACGGCAACTCAGCAGCGTGCAGCAGACCGGGCAACGCAGCGTCGAAGCCGGTCACTACCACC TCTTTGTGGGCGGTGGCCAACCCAACACCGGCGCACCCGGCGGAACCGCCGCATTCTCAATCATCGGCCGCGCCCTGCTC CCGAAATAA
Upstream 100 bases:
>100_bases CCCACCCGAACCCGAAGCAGCCCAGTGACACCACACCCTTTATTGCTCCCCGCCTCTCCAACCAGCCCCCGTCACGTCTC CCACGCCCAGGAATAATGCG
Downstream 100 bases:
>100_bases TTTGGTGCGTACTGTGCCCGACAGCACATCCCCTCGTGTGAAGAATCCGCGAAGATGACCCCAGCAACACTCACAGCCAC GCACACCAGCATCAACAGCC
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 882; Mature: 881
Protein sequence:
>882_residues MPLPIAAPPILASTLTLLLATTPTAAALTPEQHAAALVAQMTRQEKIAQTMNAAPAIPRLGIPAYDWWSEGLHGIARNGY ATVFPQAIGLAASWNTDLLQHVGTVTSTEARAKFNLTGGPGKDHPRYAGLTLWSPNINIFRDPRWGRGMETYGEDPYLTS QLAVSFIRGLQGDTPDHPRTIATPKHFAVHSGPEQGRHSFDVDVSAYDLEATYTPAFRAAIVDGHAGSVMCAYNALHGTP ACASDWLLNTRLRNDWGFNGFVVSDCDAIEDMTRFHFFRQDNASASAAALKSGNDLNCGNTYRDLNQAIARGDIDESTLD QALIRLFTARQRLGTLQPREHDPYAAIGIKHIDTPAHRALALQAAAQSLVLLKNSGNTLPLPPETTLAVLGPDADSLTAL EANYQGTSSTPVTPLTGLRTRFGTAKVHYAQGASLAPGVPNTIPETALRNHGHPGLKGEYFDTIDFSGPPHLVRQDRIIA FNWDHVAPAPGMNPHRYAVRWTGELLPPGPGTYTFAVHVARCFDCNGRDPIRLYIDDRQIIPDNATAAQATTAPQQTNNT HLEATLHFTDTRPHHIRLDMEHRGEDQGVRLEWLAPETPQLAEAERAVAHADAIVAFVGLSPEVEGEELHIDTPGFSGGD RTTIDLPATQETLLQHVKTTGKPLIVVLMSGSAVALNWAQHHADAILAAWYPGQSGGTAIAQALAGDVNPGGRLPVTFYR STQDLPPYISYDMTGRTYRYFKGQPLYPFGYGLSYTQFAYEAPQLSTATLKAGNTLTVTTHVRNTGTRAGDEVVQLYLEP PYSPQAPLRSLVGFKRVTLRPGESRLLTFTLDARQLSSVQQTGQRSVEAGHYHLFVGGGQPNTGAPGGTAAFSIIGRALL PK
Sequences:
>Translated_882_residues MPLPIAAPPILASTLTLLLATTPTAAALTPEQHAAALVAQMTRQEKIAQTMNAAPAIPRLGIPAYDWWSEGLHGIARNGY ATVFPQAIGLAASWNTDLLQHVGTVTSTEARAKFNLTGGPGKDHPRYAGLTLWSPNINIFRDPRWGRGMETYGEDPYLTS QLAVSFIRGLQGDTPDHPRTIATPKHFAVHSGPEQGRHSFDVDVSAYDLEATYTPAFRAAIVDGHAGSVMCAYNALHGTP ACASDWLLNTRLRNDWGFNGFVVSDCDAIEDMTRFHFFRQDNASASAAALKSGNDLNCGNTYRDLNQAIARGDIDESTLD QALIRLFTARQRLGTLQPREHDPYAAIGIKHIDTPAHRALALQAAAQSLVLLKNSGNTLPLPPETTLAVLGPDADSLTAL EANYQGTSSTPVTPLTGLRTRFGTAKVHYAQGASLAPGVPNTIPETALRNHGHPGLKGEYFDTIDFSGPPHLVRQDRIIA FNWDHVAPAPGMNPHRYAVRWTGELLPPGPGTYTFAVHVARCFDCNGRDPIRLYIDDRQIIPDNATAAQATTAPQQTNNT HLEATLHFTDTRPHHIRLDMEHRGEDQGVRLEWLAPETPQLAEAERAVAHADAIVAFVGLSPEVEGEELHIDTPGFSGGD RTTIDLPATQETLLQHVKTTGKPLIVVLMSGSAVALNWAQHHADAILAAWYPGQSGGTAIAQALAGDVNPGGRLPVTFYR STQDLPPYISYDMTGRTYRYFKGQPLYPFGYGLSYTQFAYEAPQLSTATLKAGNTLTVTTHVRNTGTRAGDEVVQLYLEP PYSPQAPLRSLVGFKRVTLRPGESRLLTFTLDARQLSSVQQTGQRSVEAGHYHLFVGGGQPNTGAPGGTAAFSIIGRALL PK >Mature_881_residues PLPIAAPPILASTLTLLLATTPTAAALTPEQHAAALVAQMTRQEKIAQTMNAAPAIPRLGIPAYDWWSEGLHGIARNGYA TVFPQAIGLAASWNTDLLQHVGTVTSTEARAKFNLTGGPGKDHPRYAGLTLWSPNINIFRDPRWGRGMETYGEDPYLTSQ LAVSFIRGLQGDTPDHPRTIATPKHFAVHSGPEQGRHSFDVDVSAYDLEATYTPAFRAAIVDGHAGSVMCAYNALHGTPA CASDWLLNTRLRNDWGFNGFVVSDCDAIEDMTRFHFFRQDNASASAAALKSGNDLNCGNTYRDLNQAIARGDIDESTLDQ ALIRLFTARQRLGTLQPREHDPYAAIGIKHIDTPAHRALALQAAAQSLVLLKNSGNTLPLPPETTLAVLGPDADSLTALE ANYQGTSSTPVTPLTGLRTRFGTAKVHYAQGASLAPGVPNTIPETALRNHGHPGLKGEYFDTIDFSGPPHLVRQDRIIAF NWDHVAPAPGMNPHRYAVRWTGELLPPGPGTYTFAVHVARCFDCNGRDPIRLYIDDRQIIPDNATAAQATTAPQQTNNTH LEATLHFTDTRPHHIRLDMEHRGEDQGVRLEWLAPETPQLAEAERAVAHADAIVAFVGLSPEVEGEELHIDTPGFSGGDR TTIDLPATQETLLQHVKTTGKPLIVVLMSGSAVALNWAQHHADAILAAWYPGQSGGTAIAQALAGDVNPGGRLPVTFYRS TQDLPPYISYDMTGRTYRYFKGQPLYPFGYGLSYTQFAYEAPQLSTATLKAGNTLTVTTHVRNTGTRAGDEVVQLYLEPP YSPQAPLRSLVGFKRVTLRPGESRLLTFTLDARQLSSVQQTGQRSVEAGHYHLFVGGGQPNTGAPGGTAAFSIIGRALLP K
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=422, Percent_Identity=35.0710900473934, Blast_Score=218, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 95356; Mature: 95225
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPIAAPPILASTLTLLLATTPTAAALTPEQHAAALVAQMTRQEKIAQTMNAAPAIPRL CCCCCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GIPAYDWWSEGLHGIARNGYATVFPQAIGLAASWNTDLLQHVGTVTSTEARAKFNLTGGP CCCCHHHHHHHHHHHHCCCCEEECHHHHCEECCCCHHHHHHCCCCCCCCCEEEEEECCCC GKDHPRYAGLTLWSPNINIFRDPRWGRGMETYGEDPYLTSQLAVSFIRGLQGDTPDHPRT CCCCCCEEEEEEECCCCCEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC IATPKHFAVHSGPEQGRHSFDVDVSAYDLEATYTPAFRAAIVDGHAGSVMCAYNALHGTP CCCCCCEEECCCHHHCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCC ACASDWLLNTRLRNDWGFNGFVVSDCDAIEDMTRFHFFRQDNASASAAALKSGNDLNCGN CCHHHHHHHCEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC TYRDLNQAIARGDIDESTLDQALIRLFTARQRLGTLQPREHDPYAAIGIKHIDTPAHRAL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHH ALQAAAQSLVLLKNSGNTLPLPPETTLAVLGPDADSLTALEANYQGTSSTPVTPLTGLRT HHHHHHCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHH RFGTAKVHYAQGASLAPGVPNTIPETALRNHGHPGLKGEYFDTIDFSGPPHLVRQDRIIA HCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEE FNWDHVAPAPGMNPHRYAVRWTGELLPPGPGTYTFAVHVARCFDCNGRDPIRLYIDDRQI EECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCEE IPDNATAAQATTAPQQTNNTHLEATLHFTDTRPHHIRLDMEHRGEDQGVRLEWLAPETPQ CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHCCCCCCEEEEEECCCCCC LAEAERAVAHADAIVAFVGLSPEVEGEELHIDTPGFSGGDRTTIDLPATQETLLQHVKTT HHHHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCC GKPLIVVLMSGSAVALNWAQHHADAILAAWYPGQSGGTAIAQALAGDVNPGGRLPVTFYR CCCEEEEEECCCEEEEEHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEC STQDLPPYISYDMTGRTYRYFKGQPLYPFGYGLSYTQFAYEAPQLSTATLKAGNTLTVTT CCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCEEEEEE HVRNTGTRAGDEVVQLYLEPPYSPQAPLRSLVGFKRVTLRPGESRLLTFTLDARQLSSVQ EECCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEECCCCCEEEEEEECHHHHHHHH QTGQRSVEAGHYHLFVGGGQPNTGAPGGTAAFSIIGRALLPK HHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure PLPIAAPPILASTLTLLLATTPTAAALTPEQHAAALVAQMTRQEKIAQTMNAAPAIPRL CCCCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GIPAYDWWSEGLHGIARNGYATVFPQAIGLAASWNTDLLQHVGTVTSTEARAKFNLTGGP CCCCHHHHHHHHHHHHCCCCEEECHHHHCEECCCCHHHHHHCCCCCCCCCEEEEEECCCC GKDHPRYAGLTLWSPNINIFRDPRWGRGMETYGEDPYLTSQLAVSFIRGLQGDTPDHPRT CCCCCCEEEEEEECCCCCEEECCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCC IATPKHFAVHSGPEQGRHSFDVDVSAYDLEATYTPAFRAAIVDGHAGSVMCAYNALHGTP CCCCCCEEECCCHHHCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCC ACASDWLLNTRLRNDWGFNGFVVSDCDAIEDMTRFHFFRQDNASASAAALKSGNDLNCGN CCHHHHHHHCEECCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC TYRDLNQAIARGDIDESTLDQALIRLFTARQRLGTLQPREHDPYAAIGIKHIDTPAHRAL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHH ALQAAAQSLVLLKNSGNTLPLPPETTLAVLGPDADSLTALEANYQGTSSTPVTPLTGLRT HHHHHHCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHH RFGTAKVHYAQGASLAPGVPNTIPETALRNHGHPGLKGEYFDTIDFSGPPHLVRQDRIIA HCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEE FNWDHVAPAPGMNPHRYAVRWTGELLPPGPGTYTFAVHVARCFDCNGRDPIRLYIDDRQI EECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCEE IPDNATAAQATTAPQQTNNTHLEATLHFTDTRPHHIRLDMEHRGEDQGVRLEWLAPETPQ CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHCCCCCCEEEEEECCCCCC LAEAERAVAHADAIVAFVGLSPEVEGEELHIDTPGFSGGDRTTIDLPATQETLLQHVKTT HHHHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHCC GKPLIVVLMSGSAVALNWAQHHADAILAAWYPGQSGGTAIAQALAGDVNPGGRLPVTFYR CCCEEEEEECCCEEEEEHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEEEC STQDLPPYISYDMTGRTYRYFKGQPLYPFGYGLSYTQFAYEAPQLSTATLKAGNTLTVTT CCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCEEEEEE HVRNTGTRAGDEVVQLYLEPPYSPQAPLRSLVGFKRVTLRPGESRLLTFTLDARQLSSVQ EECCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEECCCCCEEEEEEECHHHHHHHH QTGQRSVEAGHYHLFVGGGQPNTGAPGGTAAFSIIGRALLPK HHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]