Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ybeZ [H]
Identifier: 182682397
GI number: 182682397
Start: 2087608
End: 2088591
Strand: Direct
Name: ybeZ [H]
Synonym: XfasM23_1883
Alternate gene names: 182682397
Gene position: 2087608-2088591 (Clockwise)
Preceding gene: 182682396
Following gene: 182682398
Centisome position: 82.33
GC content: 54.67
Gene sequence:
>984_bases ATGAATACACCTGCACAACGTCACTTTACCCTTGAACCAGCCAACGCCGAACGGCTGGCCGACCTCTCTGGCTGCTTCAA CGAACACCTACGCCAAATCGAACTGCGTTTGGGCGTAGAGATCGCCAACCGCGGCCACACATTCCACATTACCGGCCCCG AACCCGCTGTGACCAGCACAGAAACCCTACTCCGCGCACTGTACGCCGAAGCCACCGGTACCACCTTCAACAACCACACG ATCCAACTGCGTCTGAGTGAAGCACATATGGCACAGATCGTCGAACAGACAGATACACCTCAAGATATCGGAATCAGAGT CAAGCGCGGCACCGTGCGCGGACACGGCGCCAACCAAACCAAATACCTCCACAAAATCGCCACCCACGACATCAACTTCG GCATTGGCCCCGCCGGCACCGGCAAAACCTTCCTCGCCGTGGCCAGTGCAGTCGAAGCACTGAACGAATCCCGTGTACAG CGTCTCATCCTCGTCAGACCAGCCGTCGAAGCCGGCGAAAAACTCGGTTTTCTGCCCGGCGACCTGAACCAGAAAATCGA CCCCTACCTACGCCCCCTGTATGACGCACTTTACGAAATGCTGGGTGTGGAAAAGGTCCTCAAACTACTGGAAAAAAACA TCATCGAAATCGCACCATTGGCTTACATGCGAGGACGTACACTCAACAACGCCTTTGTCATCCTGGATGAAGCGCAAAAC ACCACCATTGAACAGATGAAAATGTTTCTGACCCGTCTCGGCTTTGGCTCGACCGCCGTAGTAACCGGCGACCTAACCCA AATCGACATCCCCAAACATCTCAAGTCCGGCCTGGACGACGCCATCGAAGTACTGCACGACATTGAAGGCATCAGCTTCA CCTTCTTCAAATCACACGATGTCGTACGCCACCCACTTGTTGCACGTATCGTCAGTGCCTACGACAAACACAACACACAT CCCAGCACCACCAAACCAGCATGA
Upstream 100 bases:
>100_bases TTGAAGTACCCAAAAAACCGTCATCCTGGCTCTAGATACGTCCACACGGTACCCTTACACCTTCACCTGCTGACGCCGCC ATCCTCGCGACGTCCACACC
Downstream 100 bases:
>100_bases CCCCCGCTTCCGCTGCATCCAACCACATCATGCGGCACCACCTCCCACATTCCGACACAAAAACAGCGCCATGACACGCG GCCCGATTTTTCTCAATGTT
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTSTETLLRALYAEATGTTFNNHT IQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQTKYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHDVVRHPLVARIVSAYDKHNTH PSTTKPA
Sequences:
>Translated_327_residues MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTSTETLLRALYAEATGTTFNNHT IQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQTKYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHDVVRHPLVARIVSAYDKHNTH PSTTKPA >Mature_327_residues MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTSTETLLRALYAEATGTTFNNHT IQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQTKYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ RLILVRPAVEAGEKLGFLPGDLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHDVVRHPLVARIVSAYDKHNTH PSTTKPA
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=329, Percent_Identity=56.2310030395137, Blast_Score=356, Evalue=1e-99, Organism=Escherichia coli, GI1787257, Length=198, Percent_Identity=48.989898989899, Blast_Score=192, Evalue=2e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 36178; Mature: 36178
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTST CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEECCCCCCCCHH ETLLRALYAEATGTTFNNHTIQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQT HHHHHHHHHHHCCCEECCEEEEEEECHHHHHHHHHHCCCCHHHCEEEEECEECCCCCCHH KYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCHHCCCCCC DLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHD CHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHCHHHHHHHHHHCCCCEEEEEECCC VVRHPLVARIVSAYDKHNTHPSTTKPA HHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTST CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEECCCCCCCCHH ETLLRALYAEATGTTFNNHTIQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQT HHHHHHHHHHHCCCEECCEEEEEEECHHHHHHHHHHCCCCHHHCEEEEECEECCCCCCHH KYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCHHCCCCCC DLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHD CHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHCHHHHHHHHHHCCCCEEEEEECCC VVRHPLVARIVSAYDKHNTHPSTTKPA HHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]