Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is ybeZ [H]

Identifier: 182682397

GI number: 182682397

Start: 2087608

End: 2088591

Strand: Direct

Name: ybeZ [H]

Synonym: XfasM23_1883

Alternate gene names: 182682397

Gene position: 2087608-2088591 (Clockwise)

Preceding gene: 182682396

Following gene: 182682398

Centisome position: 82.33

GC content: 54.67

Gene sequence:

>984_bases
ATGAATACACCTGCACAACGTCACTTTACCCTTGAACCAGCCAACGCCGAACGGCTGGCCGACCTCTCTGGCTGCTTCAA
CGAACACCTACGCCAAATCGAACTGCGTTTGGGCGTAGAGATCGCCAACCGCGGCCACACATTCCACATTACCGGCCCCG
AACCCGCTGTGACCAGCACAGAAACCCTACTCCGCGCACTGTACGCCGAAGCCACCGGTACCACCTTCAACAACCACACG
ATCCAACTGCGTCTGAGTGAAGCACATATGGCACAGATCGTCGAACAGACAGATACACCTCAAGATATCGGAATCAGAGT
CAAGCGCGGCACCGTGCGCGGACACGGCGCCAACCAAACCAAATACCTCCACAAAATCGCCACCCACGACATCAACTTCG
GCATTGGCCCCGCCGGCACCGGCAAAACCTTCCTCGCCGTGGCCAGTGCAGTCGAAGCACTGAACGAATCCCGTGTACAG
CGTCTCATCCTCGTCAGACCAGCCGTCGAAGCCGGCGAAAAACTCGGTTTTCTGCCCGGCGACCTGAACCAGAAAATCGA
CCCCTACCTACGCCCCCTGTATGACGCACTTTACGAAATGCTGGGTGTGGAAAAGGTCCTCAAACTACTGGAAAAAAACA
TCATCGAAATCGCACCATTGGCTTACATGCGAGGACGTACACTCAACAACGCCTTTGTCATCCTGGATGAAGCGCAAAAC
ACCACCATTGAACAGATGAAAATGTTTCTGACCCGTCTCGGCTTTGGCTCGACCGCCGTAGTAACCGGCGACCTAACCCA
AATCGACATCCCCAAACATCTCAAGTCCGGCCTGGACGACGCCATCGAAGTACTGCACGACATTGAAGGCATCAGCTTCA
CCTTCTTCAAATCACACGATGTCGTACGCCACCCACTTGTTGCACGTATCGTCAGTGCCTACGACAAACACAACACACAT
CCCAGCACCACCAAACCAGCATGA

Upstream 100 bases:

>100_bases
TTGAAGTACCCAAAAAACCGTCATCCTGGCTCTAGATACGTCCACACGGTACCCTTACACCTTCACCTGCTGACGCCGCC
ATCCTCGCGACGTCCACACC

Downstream 100 bases:

>100_bases
CCCCCGCTTCCGCTGCATCCAACCACATCATGCGGCACCACCTCCCACATTCCGACACAAAAACAGCGCCATGACACGCG
GCCCGATTTTTCTCAATGTT

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTSTETLLRALYAEATGTTFNNHT
IQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQTKYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ
RLILVRPAVEAGEKLGFLPGDLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHDVVRHPLVARIVSAYDKHNTH
PSTTKPA

Sequences:

>Translated_327_residues
MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTSTETLLRALYAEATGTTFNNHT
IQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQTKYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ
RLILVRPAVEAGEKLGFLPGDLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHDVVRHPLVARIVSAYDKHNTH
PSTTKPA
>Mature_327_residues
MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTSTETLLRALYAEATGTTFNNHT
IQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQTKYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQ
RLILVRPAVEAGEKLGFLPGDLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHDVVRHPLVARIVSAYDKHNTH
PSTTKPA

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=329, Percent_Identity=56.2310030395137, Blast_Score=356, Evalue=1e-99,
Organism=Escherichia coli, GI1787257, Length=198, Percent_Identity=48.989898989899, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 36178; Mature: 36178

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTST
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEECCCCCCCCHH
ETLLRALYAEATGTTFNNHTIQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQT
HHHHHHHHHHHCCCEECCEEEEEEECHHHHHHHHHHCCCCHHHCEEEEECEECCCCCCHH
KYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCHHCCCCCC
DLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHD
CHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHCHHHHHHHHHHCCCCEEEEEECCC
VVRHPLVARIVSAYDKHNTHPSTTKPA
HHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNTPAQRHFTLEPANAERLADLSGCFNEHLRQIELRLGVEIANRGHTFHITGPEPAVTST
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEEEECCCCCCCCHH
ETLLRALYAEATGTTFNNHTIQLRLSEAHMAQIVEQTDTPQDIGIRVKRGTVRGHGANQT
HHHHHHHHHHHCCCEECCEEEEEEECHHHHHHHHHHCCCCHHHCEEEEECEECCCCCCHH
KYLHKIATHDINFGIGPAGTGKTFLAVASAVEALNESRVQRLILVRPAVEAGEKLGFLPG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCHHCCCCCC
DLNQKIDPYLRPLYDALYEMLGVEKVLKLLEKNIIEIAPLAYMRGRTLNNAFVILDEAQN
CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
TTIEQMKMFLTRLGFGSTAVVTGDLTQIDIPKHLKSGLDDAIEVLHDIEGISFTFFKSHD
CHHHHHHHHHHHCCCCCEEEEECCCEEECCHHHHHHCHHHHHHHHHHCCCCEEEEEECCC
VVRHPLVARIVSAYDKHNTHPSTTKPA
HHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]