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The map label for this gene is arnT [H]

Identifier: 182682376

GI number: 182682376

Start: 2065514

End: 2067211

Strand: Reverse

Name: arnT [H]

Synonym: XfasM23_1862

Alternate gene names: 182682376

Gene position: 2067211-2065514 (Counterclockwise)

Preceding gene: 182682377

Following gene: 182682375

Centisome position: 81.52

GC content: 55.65

Gene sequence:

>1698_bases
ATGAAAATCCGGCACGTTTCACATCAAGCTTGGTTGCTGTTTCTGGTGGCGTTGTTGGTGTTGGGGAGTGGTTTGGGCTT
ACGCGATCCGCATCCGGCCGATGAGCCGCGTTTCGCTCTGGTCGCCAAGCAAATGGTGGACAGTGGGGAGTGGTTATTCC
CACATCGCGGTAATGAGTTGTATTCAGATAAGCCGCCAATGCTGATGTGGTTACAGGCTGCTTTTTATACTTTGTTCGGC
AATTTGAAAGTGGCTTTTTTATTGCCTTCGCTGTTAGCTGCACTGGGTACGTTGGTATGTGTCTATGATCTTGGGCGCCG
GTTGTGGACGCGTCGGATCGGGTTGTATGCGGCGTATGCCCTGCTGTTTACGTTTCATTTCACCTATCAAGCCAAGCGTG
CACAGATTGATGCGTTAGTGGTCTTTTTCATCACCTTTGCCAACTATGGTTTGCTACGCCATCTGTTGTTTGGGGGGCAC
TGGCGTTGGTGGGTGCTGGGTTGGTTTGCGGCTGGCCTTGGGACGATCACTAAGGGTGTTGGTGCACTGGCGCTGTTGAT
TGTGTTGCCGGCAGCGGCTGCTTCATTGGCAGGGTGGCCGCGGGTCAGGGTGCACGTGCGTGATGTGCGCTTTTGGTTAG
GGCCGCTGGGTTTCTTGGTTGCGGTCTCGCTGTGGTTAGTGCCAATGGTGATGACCGCGTTGTCTGCTCAGCAGCCTGAA
TACCGTGCTTATTTGAACGATATTCTGTTACGGCAGACGTTTGGGCGCTATACCAAATCCTGGGATCACGCACAGCCTCC
TTGGTACTTCCTTCAAGTGATGCTCGTGATGTGGATTCCCACGCTTCTGGCGTTGCCGTGGGCCTTGCCGGCCTGGTGGC
GCAGAATGCGCCGCCGTGATCCCCGTTATTTGCTGCCCTTGGCGTGGTGTGTGTTGTTGCTTGTGTTCTTTTCGATTCCC
AGCGGCAAGCGAGATGTTTATATGCTGCCCGCGTTGCCAATGGTGTGTTTGGCGCTAGCACCGTTGTTGCCAGGATTGTT
GCGTAAGCGTGCGTGTTCCCGGTTGCTGCTGGCGTTTGGTGTGCTGCTGGTGCTGGTGCTGGCAGTGTTTGGGGCGGGCT
TATTGATCCGTTCGGATTGGCAGGCACGGATGATGGAGGGGACCACGTTGATTTTGGAGGATGTGCGTGTGATCGCGTGG
GGGGGGATAGCGGTCGCATCATGGGGAGTATTTAGCTTACTTGCGTTCAGCCAGCGTCGTCCTGTTGTTGCGGTGTTTTC
GGTCCTTACGACCCTGTGGTTGGTCTTCGGGTTGGTGCTGATGCCGGTTGTAAACGATTCCAGTTCTGCGCGTGGGGTCA
TGATGATTGCGGGCAAGCGCATCGGTCCGGCCGCTGAGCTTGGTTTGGTGGCTTGGAAGGAGCAGAACCTGTTGATGGCT
GACCGTTCAGTAGCGACCTTTGGTTTCTTAGTGCCTTGGGACGAGCAATTGCGCCGTGGTATTGCTTGGCAGGTGCAGCG
GCCGCGGCAGCGCTGGTTGTTAGTGCAGGAGGCTGCCATGTTCGGTTGTATCAATCGTAGCGCCAGTGTGTTTGTTGGCT
CTTCGAATCGCCGTGCCTGGTGGTTAGTGCCAGCGTGGGCCGTGCATGGGGCTTGCATAATGACCCAGGCTGAGCACGAT
CGTTTGAGCAAGCAATAG

Upstream 100 bases:

>100_bases
GCGGTGATGGCTTTTTTTATGCCAGGTTGATTAAAGACATATCAATGTGAAAAGACATATAAATGTGAAATGTATCAGTT
CAAGTGACTATTACAGCTTC

Downstream 100 bases:

>100_bases
GATAGAAGTTTCGATTAATGGACAGGCTATTGTTGGTTTTATTACTGTAAATCCTGTGATGGGTAGCGTTGTTCGTTTGG
GTGTGTTTGGGATGCAGTGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKIRHVSHQAWLLFLVALLVLGSGLGLRDPHPADEPRFALVAKQMVDSGEWLFPHRGNELYSDKPPMLMWLQAAFYTLFG
NLKVAFLLPSLLAALGTLVCVYDLGRRLWTRRIGLYAAYALLFTFHFTYQAKRAQIDALVVFFITFANYGLLRHLLFGGH
WRWWVLGWFAAGLGTITKGVGALALLIVLPAAAASLAGWPRVRVHVRDVRFWLGPLGFLVAVSLWLVPMVMTALSAQQPE
YRAYLNDILLRQTFGRYTKSWDHAQPPWYFLQVMLVMWIPTLLALPWALPAWWRRMRRRDPRYLLPLAWCVLLLVFFSIP
SGKRDVYMLPALPMVCLALAPLLPGLLRKRACSRLLLAFGVLLVLVLAVFGAGLLIRSDWQARMMEGTTLILEDVRVIAW
GGIAVASWGVFSLLAFSQRRPVVAVFSVLTTLWLVFGLVLMPVVNDSSSARGVMMIAGKRIGPAAELGLVAWKEQNLLMA
DRSVATFGFLVPWDEQLRRGIAWQVQRPRQRWLLVQEAAMFGCINRSASVFVGSSNRRAWWLVPAWAVHGACIMTQAEHD
RLSKQ

Sequences:

>Translated_565_residues
MKIRHVSHQAWLLFLVALLVLGSGLGLRDPHPADEPRFALVAKQMVDSGEWLFPHRGNELYSDKPPMLMWLQAAFYTLFG
NLKVAFLLPSLLAALGTLVCVYDLGRRLWTRRIGLYAAYALLFTFHFTYQAKRAQIDALVVFFITFANYGLLRHLLFGGH
WRWWVLGWFAAGLGTITKGVGALALLIVLPAAAASLAGWPRVRVHVRDVRFWLGPLGFLVAVSLWLVPMVMTALSAQQPE
YRAYLNDILLRQTFGRYTKSWDHAQPPWYFLQVMLVMWIPTLLALPWALPAWWRRMRRRDPRYLLPLAWCVLLLVFFSIP
SGKRDVYMLPALPMVCLALAPLLPGLLRKRACSRLLLAFGVLLVLVLAVFGAGLLIRSDWQARMMEGTTLILEDVRVIAW
GGIAVASWGVFSLLAFSQRRPVVAVFSVLTTLWLVFGLVLMPVVNDSSSARGVMMIAGKRIGPAAELGLVAWKEQNLLMA
DRSVATFGFLVPWDEQLRRGIAWQVQRPRQRWLLVQEAAMFGCINRSASVFVGSSNRRAWWLVPAWAVHGACIMTQAEHD
RLSKQ
>Mature_565_residues
MKIRHVSHQAWLLFLVALLVLGSGLGLRDPHPADEPRFALVAKQMVDSGEWLFPHRGNELYSDKPPMLMWLQAAFYTLFG
NLKVAFLLPSLLAALGTLVCVYDLGRRLWTRRIGLYAAYALLFTFHFTYQAKRAQIDALVVFFITFANYGLLRHLLFGGH
WRWWVLGWFAAGLGTITKGVGALALLIVLPAAAASLAGWPRVRVHVRDVRFWLGPLGFLVAVSLWLVPMVMTALSAQQPE
YRAYLNDILLRQTFGRYTKSWDHAQPPWYFLQVMLVMWIPTLLALPWALPAWWRRMRRRDPRYLLPLAWCVLLLVFFSIP
SGKRDVYMLPALPMVCLALAPLLPGLLRKRACSRLLLAFGVLLVLVLAVFGAGLLIRSDWQARMMEGTTLILEDVRVIAW
GGIAVASWGVFSLLAFSQRRPVVAVFSVLTTLWLVFGLVLMPVVNDSSSARGVMMIAGKRIGPAAELGLVAWKEQNLLMA
DRSVATFGFLVPWDEQLRRGIAWQVQRPRQRWLLVQEAAMFGCINRSASVFVGSSNRRAWWLVPAWAVHGACIMTQAEHD
RLSKQ

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=397, Percent_Identity=25.9445843828715, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 63864; Mature: 63864

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEEHHHHCCHHEEECCHHHHCCCC
>Mature Secondary Structure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EEEEHHHHCCHHEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA