Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682313
Identifier: 182682313
GI number: 182682313
Start: 1999553
End: 2000821
Strand: Reverse
Name: 182682313
Synonym: XfasM23_1796
Alternate gene names: NA
Gene position: 2000821-1999553 (Counterclockwise)
Preceding gene: 182682314
Following gene: 182682312
Centisome position: 78.91
GC content: 46.89
Gene sequence:
>1269_bases ATGATGTATGGTTCTCAACGAAAACCGGTGCTTCTTATCCTGAGTTACTTTATTTTTATCTGTGCTCTGTTCCCCTGTGT TGCAGCTGCTTGGCCTTCACGTGGGATGGTGATTAACAGAAAAATTATTGGTAGCTATACGCAGCGTCAGATTGCTGCTC TGCTTACTGATGAGCCGCCATCCGAGCAACCCAAATGCAACGTTCGAGTGGTTGAAATGACGTATACAACGGTTGGTGTG GTTGGTGAACCGGCCAGGGCATCTGGGGTAGTGCTTGTTCCAGACGGGCCACAGTGTCCAGGACCTTATCCTGTGCTTGG TTGGGGCAGTGCGACAGAGACGTTACGTAGTGCCGAACAGGCTAAGGGCATTATTTCTGCCAATGGCGATGATCCGTTGG TCACGCGTTTAGCGAGCCAAGGTTACGTGGTTGTCAGCACCGATTATCTTGGATTGGGTGGATCTAATTACCCGTATCAT CCATATCTGCATGCGAATTCAGAAGCCTCTGCGCTGATTGATGCCTTACGTGCATCTCGTACTGTATTACAGCATTTGAA TACGCCATTATCGAACAAGCTGATGTTGTCTGGCTTTTCGCAAGGTGGTCATACTGCAATGGCGACTCAGCGTGAAATTG AAGCGCATCTGTCAAATGAATTCAGCCTTGTTGCCAGCGCGCCCATCTCTGGTCCTTACGCACTCAGTCAAACGTTTCTT GACACTTGGACTGGCCGGAACGAAGTTGGTGAAAACAATTTCGCTATCATTTTAGGCACTTATGCGATCGTTGGGATGCA GCGTACTTACCGAAACATCTACTCTGATCCTAGTCAGGTTTTCCAGGATCCTTGGGCTAACCAGGTTGAGGCATTGTTCC CTGGCAAGAAAGATACTACTGATCTTTTCTTAGGTGATGATTTGCCGGCGATTGATCAGATCAAAGAGTATTTTCAACCT GGATTCTATAGCGACTTTCCAAAGAATCGGAAGAATCCATTCTTTGTAGATCTAGTACGCAATGATCTGCTGAATTGGGC ACCACGTACTCCAACACTGCTGTGTGGTTCTGACAACGATACCGTTGTGCCTTTTTTGAAGAACACTAATTTGGCGATAG CATCATTCAAGAAGCGTGGTAGCCGTCAAGTGTCTGTGGTTGATATTGGCACTGGCAATCGTAAAGACAATAGTGCGCTG ACGCATCTTTCCAGTGAGGAACTTTGTATCGTTAAGGTTCGCAATGAGTTTCTAGAGAAGAAACGTTAG
Upstream 100 bases:
>100_bases TGGAATCGTGCTATTAATTCATCCGATGCATGTAATGAATTTAAATCTCATGTTTTATTTCTTTCCATTCAAAATAAGTT AGATAAAGAGGTGATTGACA
Downstream 100 bases:
>100_bases TGGATATAGGGTTTGCAAACGTACCTAGATACATTTGATGATGTGGTGCGTATGAGATATCCGATAAGTGATGCAAGGAT CGCATTTAGGTGTGTGCATC
Product: putative secreted lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV VGEPARASGVVLVPDGPQCPGPYPVLGWGSATETLRSAEQAKGIISANGDDPLVTRLASQGYVVVSTDYLGLGGSNYPYH PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFSLVASAPISGPYALSQTFL DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGKKDTTDLFLGDDLPAIDQIKEYFQP GFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNRKDNSAL THLSSEELCIVKVRNEFLEKKR
Sequences:
>Translated_422_residues MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV VGEPARASGVVLVPDGPQCPGPYPVLGWGSATETLRSAEQAKGIISANGDDPLVTRLASQGYVVVSTDYLGLGGSNYPYH PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFSLVASAPISGPYALSQTFL DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGKKDTTDLFLGDDLPAIDQIKEYFQP GFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNRKDNSAL THLSSEELCIVKVRNEFLEKKR >Mature_422_residues MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV VGEPARASGVVLVPDGPQCPGPYPVLGWGSATETLRSAEQAKGIISANGDDPLVTRLASQGYVVVSTDYLGLGGSNYPYH PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFSLVASAPISGPYALSQTFL DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGKKDTTDLFLGDDLPAIDQIKEYFQP GFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNRKDNSAL THLSSEELCIVKVRNEFLEKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46380; Mature: 46380
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCC SEQPKCNVRVVEMTYTTVGVVGEPARASGVVLVPDGPQCPGPYPVLGWGSATETLRSAEQ CCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHH AKGIISANGDDPLVTRLASQGYVVVSTDYLGLGGSNYPYHPYLHANSEASALIDALRASR HCCEEECCCCCHHHHHHHCCCEEEEEECEEECCCCCCCCCCEEECCCHHHHHHHHHHHHH TVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFSLVASAPISGPYALSQTFL HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGKKDTT HHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCC DLFLGDDLPAIDQIKEYFQPGFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDND EEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCC TVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNRKDNSALTHLSSEELCIVKVRNEFLEK EEEEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEHHHHHHC KR CC >Mature Secondary Structure MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCC SEQPKCNVRVVEMTYTTVGVVGEPARASGVVLVPDGPQCPGPYPVLGWGSATETLRSAEQ CCCCCCCEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCCHHHHHHHHHH AKGIISANGDDPLVTRLASQGYVVVSTDYLGLGGSNYPYHPYLHANSEASALIDALRASR HCCEEECCCCCHHHHHHHCCCEEEEEECEEECCCCCCCCCCEEECCCHHHHHHHHHHHHH TVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFSLVASAPISGPYALSQTFL HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGKKDTT HHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCCCCC DLFLGDDLPAIDQIKEYFQPGFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDND EEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCC TVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNRKDNSALTHLSSEELCIVKVRNEFLEK EEEEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCCEEEEEEHHHHHHC KR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA