Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182682312

Identifier: 182682312

GI number: 182682312

Start: 1997291

End: 1998553

Strand: Reverse

Name: 182682312

Synonym: XfasM23_1795

Alternate gene names: NA

Gene position: 1998553-1997291 (Counterclockwise)

Preceding gene: 182682313

Following gene: 182682311

Centisome position: 78.82

GC content: 47.43

Gene sequence:

>1263_bases
ATGATGTATGGTTCTCAACGAAAACCGGTGCTTCTTATCCTGAGTTACTTTATTTTTATCTGTGCTCTGTTCCCCTGTGT
TGCAGCTGCTTGGCCTTCACGTGGGATGGTGATTAACAGAAAAATTATTGGTAGCTATACGCAGCGTCAGATTGCTGCTC
TGCTTACTGATGAGCCGCCATCCGAGCAACCCAAATGCAACGTTCGAGTGGTTGAAATGACGTATACAACGGTTGGTGTG
GTTGGTGAAGCGACCAGGGCATCTGGGGTAGTGCTTGTTCCAGACGGGCCACAGTGTCCAGGACCTTATCCTGTGCTTGG
TTGGGGCCGTGATGGACAGACATTCCGCCGCTCTGAACAGGCCAAGAGCATTATTTCTGCCAAGGGCGATGATCCGTTGG
TCACGCGTTTAGCGAGCCAAGGTTACGTGGTTGTCGGCACCGATTATCTTGGATTGGGTGGATCTAATTACCCGTATCAT
CCATATCTGCATGCGAATTCAGAAGCCTCTGCGCTGATTGATGCCTTACGTGCATCTCGTACTGTATTACAGCATTTGAA
TACGCCATTATCGAACAAGCTGATGTTGTCTGGCTTTTCGCAAGGTGGTCATACTGCAATGGCGACCCAGCGTGAAATTG
AAGCGCATCTGTCAAATGAATTCAGGCTTGTTGCCAGCGCGCCCATCTCTGGTCCTTACGCACTCAGTCAAACGTTTCTT
GACACTTGGACTGGTCGGAACGAAGTTGGTGAAAACAATTTCGCTATCATTTTAGGCACTTATGCGATCGTTGGGATGCA
GCGTACTTACCGAAACATCTACTCTGATCCTAGTCAGGTTTTCCAGGATCCTTGGGCTAACCAGGTTGAGGCATTGTTCC
CTGGTGAAAAAGGTAGGCGTGAAGTTTTCGATTATTTGCCCGATGTCAAGCAGATAAAACAGTATTTTCAACCTGGATTC
TATAGCGACTTTCCAAAGAATCGGAAGAATCCATTCTTTGTAGATCTAGTACGCAATGATCTGCTGAATTGGGCACCACG
TACTCCAACACTGCTGTGTGGTTCTGACAACGATACCGTTGTGCCTTTTTTGAAGAACACTAATTTGGCGATAGCATCAT
TCAAGAAGCGTGGTAGCCGTCAAGTGTCTGTGGTTGATATTGGCACTGGTAATCGTGAAGACAATAGTGCGGGGGAGCAT
TTTTTCACTGAGGACCCTTGTATTCTTAAGGTTCGCCAGCAGTTGCTGGATAAGCAACGTTAG

Upstream 100 bases:

>100_bases
TTTCAGATTTAGAATCGTGCTATTAATTCATCCGATCCATGTAATGAATTTAAATCTCATGTTTTATTTCTTTCCATTCA
ATATAAATTGGTGATTGACA

Downstream 100 bases:

>100_bases
TTGATCGGTCTGGTAAATGTACCCTGATAATTTTCATTGTGTGTGGCGTTGATTCTGTTGCTTAGATCATCAGATATCCG
ATAAGTGACGCTAGGATCGC

Product: putative secreted lipase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV
VGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQAKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYH
PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL
DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRREVFDYLPDVKQIKQYFQPGF
YSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEH
FFTEDPCILKVRQQLLDKQR

Sequences:

>Translated_420_residues
MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV
VGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQAKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYH
PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL
DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRREVFDYLPDVKQIKQYFQPGF
YSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEH
FFTEDPCILKVRQQLLDKQR
>Mature_420_residues
MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV
VGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQAKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYH
PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL
DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRREVFDYLPDVKQIKQYFQPGF
YSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEH
FFTEDPCILKVRQQLLDKQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46658; Mature: 46658

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCC
SEQPKCNVRVVEMTYTTVGVVGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQ
CCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHH
AKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYHPYLHANSEASALIDALRASR
HHHHHHCCCCCHHHHHHHCCCEEEEECCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHH
TVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL
HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRR
HHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEECCCCCCHH
EVFDYLPDVKQIKQYFQPGFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTV
HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCEE
VPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEHFFTEDPCILKVRQQLLDKQR
EEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCC
SEQPKCNVRVVEMTYTTVGVVGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQ
CCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHH
AKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYHPYLHANSEASALIDALRASR
HHHHHHCCCCCHHHHHHHCCCEEEEECCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHH
TVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL
HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH
DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRR
HHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEECCCCCCHH
EVFDYLPDVKQIKQYFQPGFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTV
HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCEE
VPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEHFFTEDPCILKVRQQLLDKQR
EEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA