Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682312
Identifier: 182682312
GI number: 182682312
Start: 1997291
End: 1998553
Strand: Reverse
Name: 182682312
Synonym: XfasM23_1795
Alternate gene names: NA
Gene position: 1998553-1997291 (Counterclockwise)
Preceding gene: 182682313
Following gene: 182682311
Centisome position: 78.82
GC content: 47.43
Gene sequence:
>1263_bases ATGATGTATGGTTCTCAACGAAAACCGGTGCTTCTTATCCTGAGTTACTTTATTTTTATCTGTGCTCTGTTCCCCTGTGT TGCAGCTGCTTGGCCTTCACGTGGGATGGTGATTAACAGAAAAATTATTGGTAGCTATACGCAGCGTCAGATTGCTGCTC TGCTTACTGATGAGCCGCCATCCGAGCAACCCAAATGCAACGTTCGAGTGGTTGAAATGACGTATACAACGGTTGGTGTG GTTGGTGAAGCGACCAGGGCATCTGGGGTAGTGCTTGTTCCAGACGGGCCACAGTGTCCAGGACCTTATCCTGTGCTTGG TTGGGGCCGTGATGGACAGACATTCCGCCGCTCTGAACAGGCCAAGAGCATTATTTCTGCCAAGGGCGATGATCCGTTGG TCACGCGTTTAGCGAGCCAAGGTTACGTGGTTGTCGGCACCGATTATCTTGGATTGGGTGGATCTAATTACCCGTATCAT CCATATCTGCATGCGAATTCAGAAGCCTCTGCGCTGATTGATGCCTTACGTGCATCTCGTACTGTATTACAGCATTTGAA TACGCCATTATCGAACAAGCTGATGTTGTCTGGCTTTTCGCAAGGTGGTCATACTGCAATGGCGACCCAGCGTGAAATTG AAGCGCATCTGTCAAATGAATTCAGGCTTGTTGCCAGCGCGCCCATCTCTGGTCCTTACGCACTCAGTCAAACGTTTCTT GACACTTGGACTGGTCGGAACGAAGTTGGTGAAAACAATTTCGCTATCATTTTAGGCACTTATGCGATCGTTGGGATGCA GCGTACTTACCGAAACATCTACTCTGATCCTAGTCAGGTTTTCCAGGATCCTTGGGCTAACCAGGTTGAGGCATTGTTCC CTGGTGAAAAAGGTAGGCGTGAAGTTTTCGATTATTTGCCCGATGTCAAGCAGATAAAACAGTATTTTCAACCTGGATTC TATAGCGACTTTCCAAAGAATCGGAAGAATCCATTCTTTGTAGATCTAGTACGCAATGATCTGCTGAATTGGGCACCACG TACTCCAACACTGCTGTGTGGTTCTGACAACGATACCGTTGTGCCTTTTTTGAAGAACACTAATTTGGCGATAGCATCAT TCAAGAAGCGTGGTAGCCGTCAAGTGTCTGTGGTTGATATTGGCACTGGTAATCGTGAAGACAATAGTGCGGGGGAGCAT TTTTTCACTGAGGACCCTTGTATTCTTAAGGTTCGCCAGCAGTTGCTGGATAAGCAACGTTAG
Upstream 100 bases:
>100_bases TTTCAGATTTAGAATCGTGCTATTAATTCATCCGATCCATGTAATGAATTTAAATCTCATGTTTTATTTCTTTCCATTCA ATATAAATTGGTGATTGACA
Downstream 100 bases:
>100_bases TTGATCGGTCTGGTAAATGTACCCTGATAATTTTCATTGTGTGTGGCGTTGATTCTGTTGCTTAGATCATCAGATATCCG ATAAGTGACGCTAGGATCGC
Product: putative secreted lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV VGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQAKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYH PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRREVFDYLPDVKQIKQYFQPGF YSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEH FFTEDPCILKVRQQLLDKQR
Sequences:
>Translated_420_residues MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV VGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQAKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYH PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRREVFDYLPDVKQIKQYFQPGF YSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEH FFTEDPCILKVRQQLLDKQR >Mature_420_residues MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPPSEQPKCNVRVVEMTYTTVGV VGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQAKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYH PYLHANSEASALIDALRASRTVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRREVFDYLPDVKQIKQYFQPGF YSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTVVPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEH FFTEDPCILKVRQQLLDKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46658; Mature: 46658
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCC SEQPKCNVRVVEMTYTTVGVVGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQ CCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHH AKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYHPYLHANSEASALIDALRASR HHHHHHCCCCCHHHHHHHCCCEEEEECCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHH TVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRR HHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEECCCCCCHH EVFDYLPDVKQIKQYFQPGFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTV HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCEE VPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEHFFTEDPCILKVRQQLLDKQR EEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MMYGSQRKPVLLILSYFIFICALFPCVAAAWPSRGMVINRKIIGSYTQRQIAALLTDEPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCC SEQPKCNVRVVEMTYTTVGVVGEATRASGVVLVPDGPQCPGPYPVLGWGRDGQTFRRSEQ CCCCCCCEEEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCCHHHHHHHH AKSIISAKGDDPLVTRLASQGYVVVGTDYLGLGGSNYPYHPYLHANSEASALIDALRASR HHHHHHCCCCCHHHHHHHCCCEEEEECCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHH TVLQHLNTPLSNKLMLSGFSQGGHTAMATQREIEAHLSNEFRLVASAPISGPYALSQTFL HHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHH DTWTGRNEVGENNFAIILGTYAIVGMQRTYRNIYSDPSQVFQDPWANQVEALFPGEKGRR HHCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHEECCCCCCHH EVFDYLPDVKQIKQYFQPGFYSDFPKNRKNPFFVDLVRNDLLNWAPRTPTLLCGSDNDTV HHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCEEEECCCCCEE VPFLKNTNLAIASFKKRGSRQVSVVDIGTGNREDNSAGEHFFTEDPCILKVRQQLLDKQR EEEEECCCEEEEEHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA