Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682303
Identifier: 182682303
GI number: 182682303
Start: 1984290
End: 1984820
Strand: Reverse
Name: 182682303
Synonym: XfasM23_1786
Alternate gene names: NA
Gene position: 1984820-1984290 (Counterclockwise)
Preceding gene: 182682304
Following gene: 182682302
Centisome position: 78.28
GC content: 50.09
Gene sequence:
>531_bases ATGAGTACAAAAACCCTCAAAAAAATAGTCGGTTTGATTGTTCTCTTGGTATTAGTCGGTTGCATGCGTAGTGTAACCAC CTCGTTTGGCGATGCACCAGATTTGAAAAATTGGGTGAGTGAGGTGCGTGCGCGTCCTGCTCCACCTCTGGAACAACTAC CAGTGATGCAGCAGTTTGAAACCTTTGAGTATTCTGCGCAGGGAATGCGTGATCCCTTTAGCGACGCTTGGGTTAATCCT GAGGGGGGCAATGGGTTACGTCCAGATCCGCATCGACGTAAGGAGCCGCTGGAAGCATTCCCACTTGATACATTGAAGAT GGTGGGTACGATCGGTAGGGGTGCTGGTTTGGTTGCAGTGATTACTGCTCCTGACAAAGTCACTTATCGGGTGCGTCGAG GGATGTATATTGGACAGAACGATGGGCGAGTTACGAAGGTGAATGAAGATCGCGTCGAACTTGTGGAACTTGTTTCAAAT GGCGAGGGAGGATGGTTGGAACGGCCAGCCGCGCTTTCGTTCGACGATTAA
Upstream 100 bases:
>100_bases AATTGTCTGGCACAGTGAAGACCTACCGCTACCTGGATGACCAGGAAATAGCTAATAAGGAGAATCGTACTGCTGATGCT GCGAGCAAGAAGGATGGACC
Downstream 100 bases:
>100_bases TGATTGATTTAAGGGATAGAATGATGACTTTATTTGAAGTCTTAGGCTTGCGTTTTGTTAGGCGTATAGCCTCGCTTCGC GTATGTGAAATTTGGGTATG
Product: pilus assembly protein PilP
Products: NA
Alternate protein names: Pilus Assembly Protein PilQ; Type IV Pilus Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein PilP; Type IV Pilus Assembly Protein PilP; Tfp Pilus Assembly Protein PilP; Fimbrial Assembly Protein; Lipoprotein; Pilus Assembly Protein; Type IV Pilus Assembly Protein Pilp; Type IV Pilus Assembly; Pilus Assembly Protein Pilp; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-4 Assembly Lipoprotein; Type IV Fimbrial Biogenesis Protein PilP; Type 4 Fimbrial Biogenesis Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSTKTLKKIVGLIVLLVLVGCMRSVTTSFGDAPDLKNWVSEVRARPAPPLEQLPVMQQFETFEYSAQGMRDPFSDAWVNP EGGNGLRPDPHRRKEPLEAFPLDTLKMVGTIGRGAGLVAVITAPDKVTYRVRRGMYIGQNDGRVTKVNEDRVELVELVSN GEGGWLERPAALSFDD
Sequences:
>Translated_176_residues MSTKTLKKIVGLIVLLVLVGCMRSVTTSFGDAPDLKNWVSEVRARPAPPLEQLPVMQQFETFEYSAQGMRDPFSDAWVNP EGGNGLRPDPHRRKEPLEAFPLDTLKMVGTIGRGAGLVAVITAPDKVTYRVRRGMYIGQNDGRVTKVNEDRVELVELVSN GEGGWLERPAALSFDD >Mature_175_residues STKTLKKIVGLIVLLVLVGCMRSVTTSFGDAPDLKNWVSEVRARPAPPLEQLPVMQQFETFEYSAQGMRDPFSDAWVNPE GGNGLRPDPHRRKEPLEAFPLDTLKMVGTIGRGAGLVAVITAPDKVTYRVRRGMYIGQNDGRVTKVNEDRVELVELVSNG EGGWLERPAALSFDD
Specific function: Unknown
COG id: COG3168
COG function: function code NU; Tfp pilus assembly protein PilP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19425; Mature: 19293
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKTLKKIVGLIVLLVLVGCMRSVTTSFGDAPDLKNWVSEVRARPAPPLEQLPVMQQFE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCHHHHHHH TFEYSAQGMRDPFSDAWVNPEGGNGLRPDPHRRKEPLEAFPLDTLKMVGTIGRGAGLVAV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE ITAPDKVTYRVRRGMYIGQNDGRVTKVNEDRVELVELVSNGEGGWLERPAALSFDD EECCCHHHHHHHCCEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure STKTLKKIVGLIVLLVLVGCMRSVTTSFGDAPDLKNWVSEVRARPAPPLEQLPVMQQFE CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHCHHHHHHH TFEYSAQGMRDPFSDAWVNPEGGNGLRPDPHRRKEPLEAFPLDTLKMVGTIGRGAGLVAV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE ITAPDKVTYRVRRGMYIGQNDGRVTKVNEDRVELVELVSNGEGGWLERPAALSFDD EECCCHHHHHHHCCEEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA