Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is CYP133B1 [H]
Identifier: 182682299
GI number: 182682299
Start: 1976790
End: 1977998
Strand: Direct
Name: CYP133B1 [H]
Synonym: XfasM23_1782
Alternate gene names: 182682299
Gene position: 1976790-1977998 (Clockwise)
Preceding gene: 182682298
Following gene: 182682307
Centisome position: 77.96
GC content: 49.38
Gene sequence:
>1209_bases GTGAAACTCACCGACCTCTCCAACCCCGCGTTCTTAGAAAATCCCTATCCACTGTATGAAACCCTACGCGCACAGGCACC CTTCGTGAGCATCGGACCGAATGCACTGATGACGGGACGCTACAGCCTAGTCGACTCCCTGCTCCACAACAGGAACATGG GAAAAAAATACATAGAGAGCATACGATTACGGTACGGAGACACCGCTGCTGATATGCCATTGTTTCAAGCATTTAGCCGG ATGTTTATAACGATCAACCCGCCTGCACATACACATCTACGTGGCTTGGTAATGCAAGCGTTCACCGGGCGAGAGAGTGA ATCAATGCGCCCCCTTGCGATCGATACGGCGCACCAATTGATTGACAACTTTGAACAGAAACCATCCGTTGATCTTGTTG CTGAATTTGCCTTTCCCTTTCCCATGCAGATCATTTGCAAAATGATGGATGTGGATATTGGAGATGCCGTCACCCTGGGT ATGGCGGTGAGCAAAATTGCCAAGGTACTCGACCCTTCGCCAATGTCGGCCGATGAATTAGTACACGCAAGCACTGCCTA CGAAGAGCTTGCGCAATACTTTACGAAGTTGATTGAGCTACGCCGCACCCATCCTGGAACTGACTTAATTTCCATGTTTC TGCGTGCTGAGGAAGATGGCGAGAAACTAACCCATGATGAAATCGTCTCCAATGTGATTATGTTATTAATCGCCGGTTAC GAAACCACATCCAATATGATTGGCAATGCATTGATTGCGTTGCATCGCCATCCAGAGCAACTCGCACTGCTCAAGAGTGA TCTGTCACTGATGCCACAAGCGGTATCGGAATGCTTACGTTACGACGGGTCGGTACAGTTCACGATGCGCGCGGCGATGG ATGATATAGAGGTTGAAGGCGAGTTGGTCCCTCGCGGCACAGTAGTATTTTTGATGCTTGGTGCTGCCAACCGTGATCCG GCACAATTCACTCATCCCGACCAGCTGGATATTACTCGTAAGCAAGGACGCCTCCAGTCATTCGGTGCAGGCATTCATCA TTGTCTTGGCTATCGGCTTGCGCTGATTGAACTGGAATGTGCATTAACTACGTTGTTTGAACGCCTACCACATTTAAGGC TCGCTCATCTGGATGCATTGAACTGGAACCAACGGAGCAACCTGCGGGGCGTCAATACATTGATTGTGGATTTGCATGCA AAAAACTAG
Upstream 100 bases:
>100_bases CCTGTGTCTCCCATTCCAAATCTCATACTTCAGTGCTTGCGAAACACGCTTGCATCCCTTAGAACCTCATAATCCAGACC CCCTCCACACACACGATCCC
Downstream 100 bases:
>100_bases AGACACCACATACAAAAGTGATGCACATCATTAAACCTTATTAAACTGCCACCACACGCTAGTATCATGTCATTGCAACT TTATTAAACGATGAGATCAA
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKLTDLSNPAFLENPYPLYETLRAQAPFVSIGPNALMTGRYSLVDSLLHNRNMGKKYIESIRLRYGDTAADMPLFQAFSR MFITINPPAHTHLRGLVMQAFTGRESESMRPLAIDTAHQLIDNFEQKPSVDLVAEFAFPFPMQIICKMMDVDIGDAVTLG MAVSKIAKVLDPSPMSADELVHASTAYEELAQYFTKLIELRRTHPGTDLISMFLRAEEDGEKLTHDEIVSNVIMLLIAGY ETTSNMIGNALIALHRHPEQLALLKSDLSLMPQAVSECLRYDGSVQFTMRAAMDDIEVEGELVPRGTVVFLMLGAANRDP AQFTHPDQLDITRKQGRLQSFGAGIHHCLGYRLALIELECALTTLFERLPHLRLAHLDALNWNQRSNLRGVNTLIVDLHA KN
Sequences:
>Translated_402_residues MKLTDLSNPAFLENPYPLYETLRAQAPFVSIGPNALMTGRYSLVDSLLHNRNMGKKYIESIRLRYGDTAADMPLFQAFSR MFITINPPAHTHLRGLVMQAFTGRESESMRPLAIDTAHQLIDNFEQKPSVDLVAEFAFPFPMQIICKMMDVDIGDAVTLG MAVSKIAKVLDPSPMSADELVHASTAYEELAQYFTKLIELRRTHPGTDLISMFLRAEEDGEKLTHDEIVSNVIMLLIAGY ETTSNMIGNALIALHRHPEQLALLKSDLSLMPQAVSECLRYDGSVQFTMRAAMDDIEVEGELVPRGTVVFLMLGAANRDP AQFTHPDQLDITRKQGRLQSFGAGIHHCLGYRLALIELECALTTLFERLPHLRLAHLDALNWNQRSNLRGVNTLIVDLHA KN >Mature_402_residues MKLTDLSNPAFLENPYPLYETLRAQAPFVSIGPNALMTGRYSLVDSLLHNRNMGKKYIESIRLRYGDTAADMPLFQAFSR MFITINPPAHTHLRGLVMQAFTGRESESMRPLAIDTAHQLIDNFEQKPSVDLVAEFAFPFPMQIICKMMDVDIGDAVTLG MAVSKIAKVLDPSPMSADELVHASTAYEELAQYFTKLIELRRTHPGTDLISMFLRAEEDGEKLTHDEIVSNVIMLLIAGY ETTSNMIGNALIALHRHPEQLALLKSDLSLMPQAVSECLRYDGSVQFTMRAAMDDIEVEGELVPRGTVVFLMLGAANRDP AQFTHPDQLDITRKQGRLQSFGAGIHHCLGYRLALIELECALTTLFERLPHLRLAHLDALNWNQRSNLRGVNTLIVDLHA KN
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI4503213, Length=174, Percent_Identity=34.4827586206897, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI261278370, Length=169, Percent_Identity=31.3609467455621, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI195972896, Length=169, Percent_Identity=31.3609467455621, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI195972898, Length=169, Percent_Identity=31.3609467455621, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI261278372, Length=169, Percent_Identity=31.3609467455621, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI13435386, Length=195, Percent_Identity=24.1025641025641, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI4503231, Length=195, Percent_Identity=24.6153846153846, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17540354, Length=288, Percent_Identity=25, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17552522, Length=214, Percent_Identity=27.1028037383178, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115532670, Length=208, Percent_Identity=25.9615384615385, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71982956, Length=208, Percent_Identity=25.9615384615385, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71982977, Length=208, Percent_Identity=25.9615384615385, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864382, Length=196, Percent_Identity=29.0816326530612, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24642101, Length=167, Percent_Identity=28.7425149700599, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17933518, Length=193, Percent_Identity=25.3886010362694, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI21355669, Length=194, Percent_Identity=25.7731958762887, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45001; Mature: 45001
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTDLSNPAFLENPYPLYETLRAQAPFVSIGPNALMTGRYSLVDSLLHNRNMGKKYIES CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHCCCHHHHHHHHHHCCCCCHHHHHH IRLRYGDTAADMPLFQAFSRMFITINPPAHTHLRGLVMQAFTGRESESMRPLAIDTAHQL HHHHCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH IDNFEQKPSVDLVAEFAFPFPMQIICKMMDVDIGDAVTLGMAVSKIAKVLDPSPMSADEL HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH VHASTAYEELAQYFTKLIELRRTHPGTDLISMFLRAEEDGEKLTHDEIVSNVIMLLIAGY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC ETTSNMIGNALIALHRHPEQLALLKSDLSLMPQAVSECLRYDGSVQFTMRAAMDDIEVEG CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCC ELVPRGTVVFLMLGAANRDPAQFTHPDQLDITRKQGRLQSFGAGIHHCLGYRLALIELEC EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHH ALTTLFERLPHLRLAHLDALNWNQRSNLRGVNTLIVDLHAKN HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MKLTDLSNPAFLENPYPLYETLRAQAPFVSIGPNALMTGRYSLVDSLLHNRNMGKKYIES CCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCHHCCCHHHHHHHHHHCCCCCHHHHHH IRLRYGDTAADMPLFQAFSRMFITINPPAHTHLRGLVMQAFTGRESESMRPLAIDTAHQL HHHHCCCCCCCCHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHH IDNFEQKPSVDLVAEFAFPFPMQIICKMMDVDIGDAVTLGMAVSKIAKVLDPSPMSADEL HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH VHASTAYEELAQYFTKLIELRRTHPGTDLISMFLRAEEDGEKLTHDEIVSNVIMLLIAGY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC ETTSNMIGNALIALHRHPEQLALLKSDLSLMPQAVSECLRYDGSVQFTMRAAMDDIEVEG CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCC ELVPRGTVVFLMLGAANRDPAQFTHPDQLDITRKQGRLQSFGAGIHHCLGYRLALIELEC EECCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHH ALTTLFERLPHLRLAHLDALNWNQRSNLRGVNTLIVDLHAKN HHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]