Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682291
Identifier: 182682291
GI number: 182682291
Start: 1965220
End: 1965591
Strand: Reverse
Name: 182682291
Synonym: XfasM23_1774
Alternate gene names: NA
Gene position: 1965591-1965220 (Counterclockwise)
Preceding gene: 182682292
Following gene: 182682290
Centisome position: 77.52
GC content: 50.54
Gene sequence:
>372_bases ATGAAGGTTTTTTTCCGCTATTGCTGCCTTGCCGTAGTCATTTTTATGGCTTGCTTGGTTGCATACCCGGTATGTGCACA GGATCCGAGTAGTCATGCGGATGGCCATGGGCTGCTTCCCCGCAATGGTAGTAAAAACAACACTCTGTCAGATGCGATCC GACAGGTGCAGAGAACCACTGGTGGACAGATTCTTGGCGCAGAGCAGGTGCAGTTCGAGGGGCGTGATATTAAACGAATT AAATATATCGATAATACGGGTCGGGTGGGTGTATGTTACACGGGTGAGTCTTTACCAGCGTGCGAGTTCCCGCGCTCTTC ACGCATGGACGTTGAGGTAAACGGATTACCACCACGTGCCGATAACCTTTAG
Upstream 100 bases:
>100_bases AGATATGATTCACTATTGAAAATAAATAATCTCCTTTAGTTTTAATGTGTTTTTTTATTTTTCTGAATGATCCAGAGGCA TTTGTTAGGATCCCAGTGCT
Downstream 100 bases:
>100_bases ATACGATAGATTTTGTGGCTTGCATTATATTTTTTAGTGTATTTACATTCCCACGGCCTCCCAGGCCACTAACGAAACTA GGGAGAGTTCATGCGTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKVFFRYCCLAVVIFMACLVAYPVCAQDPSSHADGHGLLPRNGSKNNTLSDAIRQVQRTTGGQILGAEQVQFEGRDIKRI KYIDNTGRVGVCYTGESLPACEFPRSSRMDVEVNGLPPRADNL
Sequences:
>Translated_123_residues MKVFFRYCCLAVVIFMACLVAYPVCAQDPSSHADGHGLLPRNGSKNNTLSDAIRQVQRTTGGQILGAEQVQFEGRDIKRI KYIDNTGRVGVCYTGESLPACEFPRSSRMDVEVNGLPPRADNL >Mature_123_residues MKVFFRYCCLAVVIFMACLVAYPVCAQDPSSHADGHGLLPRNGSKNNTLSDAIRQVQRTTGGQILGAEQVQFEGRDIKRI KYIDNTGRVGVCYTGESLPACEFPRSSRMDVEVNGLPPRADNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13523; Mature: 13523
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFFRYCCLAVVIFMACLVAYPVCAQDPSSHADGHGLLPRNGSKNNTLSDAIRQVQRTT CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC GGQILGAEQVQFEGRDIKRIKYIDNTGRVGVCYTGESLPACEFPRSSRMDVEVNGLPPRA CCEEECCCEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC DNL CCC >Mature Secondary Structure MKVFFRYCCLAVVIFMACLVAYPVCAQDPSSHADGHGLLPRNGSKNNTLSDAIRQVQRTT CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC GGQILGAEQVQFEGRDIKRIKYIDNTGRVGVCYTGESLPACEFPRSSRMDVEVNGLPPRA CCEEECCCEEEECCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCC DNL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA