Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is alx [H]
Identifier: 182682280
GI number: 182682280
Start: 1951186
End: 1952145
Strand: Direct
Name: alx [H]
Synonym: XfasM23_1762
Alternate gene names: 182682280
Gene position: 1951186-1952145 (Clockwise)
Preceding gene: 182682278
Following gene: 182682284
Centisome position: 76.95
GC content: 51.35
Gene sequence:
>960_bases ATGCAAACCATTGGCAATCCCTGGTTGTGGAGCGGATTCGCAATCGTGGTGATAGCAGCTCTGTTGGTCGATCTGATCCT GATGCGCCACGGCGGACCACATAAAGTCACGTTTAAGGAAGCCGCCTGGTGGAGCATCGGTTGGGTGCTCCTCGCACTGC TGTTCAATGTCGGACTATGGTGGTACTTGCAAAGCACCGCTGATCCAAGCATCGCCAACCGAGTCAGCATTGAGTTCCTC ACCGGCTACTTAGTCGAAAAGTCATTAGCAGTGGACAATATTTTCGTGTTTTTGATGCTGATGAGCTACTTCGCTGTTCC AGAGGAACAACGTCAACGTGTGCTGATCATCGGTGTACTCGGCGCGCTCATACTGCGTGGATTGATGATTTTCGCTGGCT CACTGCTACTGACCAAATTCCACTGGTTGTTGTACGTGTTCGGCGTATTTCTGCTGCTGACCGGGGTGAAAATGTGGTTT TCCGCTGGTAAAGAACCGGAGCTGGAAACTAACCCCATACTGCGCTGGATGCGCAATCACCTGCGCCTGAGTCCTGATTA TGCAGGCAATGCGCTAAGCGTGGTCCGTGACGGTAAACGCTGGTTCACTCCATTTTTCGTGGTCCTGATACTAATCGCAG TGATTGATGTGATCTTTGCAGTTGACAGTATTCCGGCCATCTTCGCGATCACGACAGATCCATTCATTGTGCTCACCTCC AACGTGTTCGCAGTGCTGGGCCTGCGTGCCATGTTCTTCCTATTGGCCGGGATGGCCGATCGCTTCCACCTGTTACCGTA CGGGCTAGCAGTGATCCTAATCTTTATCGGCATCAAGATGGTCATCATCGACCTGTACAAGATTCCAGTACTAGTCTCAC TTGGGATGGTCATCGCCATCCTAGCCATCACTATCGCACTTAGCTTGATGAACCCACCAAAGCAGATGGGAAAACACTGA
Upstream 100 bases:
>100_bases CACGCGGGCAAAAATCTATATCCGGATCACAAGGAGCTTTCCGTATATCAGTGCCCCACCCTGCAGCTCCAAGCCCTTCT TCATTTCCCCGGAGACTCAC
Downstream 100 bases:
>100_bases TATCAGACTTTGTCAATGGGCGGGTTTGAGCCGTATAAGCAAGGCCCCCTTGCCAACCGAACTAATACTGAGACCGAGAA ATCTTAAGCACGTCAAACAC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLWWYLQSTADPSIANRVSIEFL TGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVLGALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWF SAGKEPELETNPILRWMRNHLRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAILAITIALSLMNPPKQMGKH
Sequences:
>Translated_319_residues MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLWWYLQSTADPSIANRVSIEFL TGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVLGALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWF SAGKEPELETNPILRWMRNHLRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAILAITIALSLMNPPKQMGKH >Mature_319_residues MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLWWYLQSTADPSIANRVSIEFL TGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVLGALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWF SAGKEPELETNPILRWMRNHLRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAILAITIALSLMNPPKQMGKH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=304, Percent_Identity=57.2368421052632, Blast_Score=347, Evalue=6e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35777; Mature: 35777
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH WYLQSTADPSIANRVSIEFLTGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEHHHHHH GALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWFSAGKEPELETNPILRWMRNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHH NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAITIALSLMNPPKQMGKH HHHHHHHHHCCCHHHHCCC >Mature Secondary Structure MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH WYLQSTADPSIANRVSIEFLTGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVL EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEHHHHHH GALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWFSAGKEPELETNPILRWMRNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH LRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHH NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAITIALSLMNPPKQMGKH HHHHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]