Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is alx [H]

Identifier: 182682280

GI number: 182682280

Start: 1951186

End: 1952145

Strand: Direct

Name: alx [H]

Synonym: XfasM23_1762

Alternate gene names: 182682280

Gene position: 1951186-1952145 (Clockwise)

Preceding gene: 182682278

Following gene: 182682284

Centisome position: 76.95

GC content: 51.35

Gene sequence:

>960_bases
ATGCAAACCATTGGCAATCCCTGGTTGTGGAGCGGATTCGCAATCGTGGTGATAGCAGCTCTGTTGGTCGATCTGATCCT
GATGCGCCACGGCGGACCACATAAAGTCACGTTTAAGGAAGCCGCCTGGTGGAGCATCGGTTGGGTGCTCCTCGCACTGC
TGTTCAATGTCGGACTATGGTGGTACTTGCAAAGCACCGCTGATCCAAGCATCGCCAACCGAGTCAGCATTGAGTTCCTC
ACCGGCTACTTAGTCGAAAAGTCATTAGCAGTGGACAATATTTTCGTGTTTTTGATGCTGATGAGCTACTTCGCTGTTCC
AGAGGAACAACGTCAACGTGTGCTGATCATCGGTGTACTCGGCGCGCTCATACTGCGTGGATTGATGATTTTCGCTGGCT
CACTGCTACTGACCAAATTCCACTGGTTGTTGTACGTGTTCGGCGTATTTCTGCTGCTGACCGGGGTGAAAATGTGGTTT
TCCGCTGGTAAAGAACCGGAGCTGGAAACTAACCCCATACTGCGCTGGATGCGCAATCACCTGCGCCTGAGTCCTGATTA
TGCAGGCAATGCGCTAAGCGTGGTCCGTGACGGTAAACGCTGGTTCACTCCATTTTTCGTGGTCCTGATACTAATCGCAG
TGATTGATGTGATCTTTGCAGTTGACAGTATTCCGGCCATCTTCGCGATCACGACAGATCCATTCATTGTGCTCACCTCC
AACGTGTTCGCAGTGCTGGGCCTGCGTGCCATGTTCTTCCTATTGGCCGGGATGGCCGATCGCTTCCACCTGTTACCGTA
CGGGCTAGCAGTGATCCTAATCTTTATCGGCATCAAGATGGTCATCATCGACCTGTACAAGATTCCAGTACTAGTCTCAC
TTGGGATGGTCATCGCCATCCTAGCCATCACTATCGCACTTAGCTTGATGAACCCACCAAAGCAGATGGGAAAACACTGA

Upstream 100 bases:

>100_bases
CACGCGGGCAAAAATCTATATCCGGATCACAAGGAGCTTTCCGTATATCAGTGCCCCACCCTGCAGCTCCAAGCCCTTCT
TCATTTCCCCGGAGACTCAC

Downstream 100 bases:

>100_bases
TATCAGACTTTGTCAATGGGCGGGTTTGAGCCGTATAAGCAAGGCCCCCTTGCCAACCGAACTAATACTGAGACCGAGAA
ATCTTAAGCACGTCAAACAC

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLWWYLQSTADPSIANRVSIEFL
TGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVLGALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWF
SAGKEPELETNPILRWMRNHLRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS
NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAILAITIALSLMNPPKQMGKH

Sequences:

>Translated_319_residues
MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLWWYLQSTADPSIANRVSIEFL
TGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVLGALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWF
SAGKEPELETNPILRWMRNHLRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS
NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAILAITIALSLMNPPKQMGKH
>Mature_319_residues
MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLWWYLQSTADPSIANRVSIEFL
TGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVLGALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWF
SAGKEPELETNPILRWMRNHLRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS
NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAILAITIALSLMNPPKQMGKH

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=304, Percent_Identity=57.2368421052632, Blast_Score=347, Evalue=6e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 35777; Mature: 35777

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
WYLQSTADPSIANRVSIEFLTGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEHHHHHH
GALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWFSAGKEPELETNPILRWMRNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHH
NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAITIALSLMNPPKQMGKH
HHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MQTIGNPWLWSGFAIVVIAALLVDLILMRHGGPHKVTFKEAAWWSIGWVLLALLFNVGLW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
WYLQSTADPSIANRVSIEFLTGYLVEKSLAVDNIFVFLMLMSYFAVPEEQRQRVLIIGVL
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEHHHHHH
GALILRGLMIFAGSLLLTKFHWLLYVFGVFLLLTGVKMWFSAGKEPELETNPILRWMRNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LRLSPDYAGNALSVVRDGKRWFTPFFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHH
NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILIFIGIKMVIIDLYKIPVLVSLGMVIAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAITIALSLMNPPKQMGKH
HHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]