Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is bglX [H]
Identifier: 182682250
GI number: 182682250
Start: 1913219
End: 1915441
Strand: Reverse
Name: bglX [H]
Synonym: XfasM23_1732
Alternate gene names: 182682250
Gene position: 1915441-1913219 (Counterclockwise)
Preceding gene: 182682251
Following gene: 182682246
Centisome position: 75.54
GC content: 53.49
Gene sequence:
>2223_bases ATGATGGGAATTCCACCGCTAAATAAACGTTTTATCAAGGATTTCATGACTGCTTCTGATCGCATTGAATCCCTGCTTTC CTGTATGACGGTAGAGGAAAAGGTGGGGCAGTTGGGTGTTTTTGCTGACATGGTGCGGCCATTTGCTCCAGACGTGAATC CTGAGGCCAATGTGCGTAACGCTGATGAGCTGTTGGCTCAGGTGCGTGCTGGTCGAGTTGGTTCGTTGTTCAATGGTGTT GGGGTTGAACTGGGGCTTAGGATCCAGCAGGTAGCGGTAGAGGAGAGTCGTCTCGGAATTCCAGTCATTTTAGCTGCAGA TGTGATTCATGGGATGCGTACTGTGTTCCCAATTCCGTTGGGTGAAGCGGCCAGCTTCGAGCCAGAGCTTGCCGAACGTA CTGCGCGTGCGACTGCGATTGAGGCTACTGCGGCGGGTATTCATTGGACTTACGCGCCGGCAGTGGACATTGCTCGTGAC CAGCGCTGGGGCCGTGTTGCTGAGGGGGCGGGTGAGGATACGCTGCTGGGGTCTGCATTTGCCGCAGCCCGTGTGCGTGG TTTTCAGGGGCCTGATTTGAAGGCACCCGATGCATTGATGGCAACACCAAAACACTTTGCTGCTTACGGTGCGGTTGCTG CCGGGATGGAGTATGCGAATGTGGAGATTGCGTTGCAGACGCTGCGTGATGTGCATTTACCACCGTTCCAAGCAGGGTTT GCTGCTGGTGCGCTGACGGTGATGACGGCGTTCAATGATATTAATGGGGTGCCGGCCAGCGCGAATCGTGAGTTGTTGAC CGATATTCTGCGTGGTGAGTGGTGTTTCCCTGGTTTGGTGATTTCCGATTACACCGCTGATATGGAGTTGATCGCACATG GCTATGCTGCTGATGCGCGTGATGCGACGAAGAAAGCTTTCTTGGCTGGGTTAGATTTGAGTATGCAGAGCGGCTTTTAT GCCGAGCATTTGCCTGAGTTAGTGGCGAGCGGTGAGGTGCCGATGGCGATGCTTGATATGAGTGTGCGGCGTATGTTGCA GATCAAGGAAGTCATTGGTTTATTCGACAACCCGTACCGGTCTTTGGATCTGGTCCGTGAGGCCGATGTTTCGTACATTT CGGCGCATGATGCGTTGTCGCGTGATGCGGCGCGGCGTTCAATCGTATTACTGAAAAACGATGGGCCGTTATTGCCGTTG CGTAAGCAGGCACAGCGTATTGCGCTGATTGGTCCGTTTGTGCAAGATCGTGACAACATTGAGGGATGTTGGACCCTATT CGGCGATAAGTACCGTTATGTGACTTTGGAGCAGGGCGTGCGCGCAGTGGTCGATACGCAGATGCTAACGGTAGTTCCTG GTTGCAATATTGAGGAGCCAATTTCTGGTGGTGTTTCCGATGCGGTGCAAGCAGCACAGGCGGCCGATGTGGTGGTGTTG GCATTGGGCGAGCCGCAGCGTTACAGCGGTGAAGCGCAGTCGCGTACAGACATCGTGTTGCCTGAGGTGCAGCAGGTGTT GGCTGAGGCAGTCGCTGCGACGGGTAAGCCAATCGTGGTGTTGTTACGTAACGGTCGCGCGTTGGCACTCAGGGGAGCGG TACGTGATGCGAAGGCGATCTTGGTTACTTGGTTTCTTGGGACGCAGACTGGTACGGCTGTCACTGATGTGTTGTTTGGT GACTATAATCCGTCCGGGCGTTTGCCAGTGAGTTTCCCTTACACGACGGGACAGCAGCCGTATTTTTATAATCATTCACG GACTGGGCGTCCGGAGTTACCGACGATGTCTGAGTTCAAGGCACGTTGGCGTGAGGTTCCGAATGCTCCGCTATATTCGT TCGGTCATGGCTTAAGTTATACCCGTTTCGCTTATTCTGCACCGCAATTAAGCACGGTATCTCTGGGGTGGGATCAGACG TTGTTGGTGACGACCCGAGTGACTAACATCGGGATGGTTGTTGGTGAAGAGGTGGTGCAGTTGTATGTGCATGATCGTGT TGCCAGTCGCGTGCGACCGATACGTGAGCTGAAGGCTTTTCGTAAGGTATACATTGCACCAGGTGAAAGTGTGGAGGTGT GTTTTACTCTCGACCGTAATGCGTTGGCTTTTACCAATCCGCAAGGTGTGTATGGTGCCGAGCCTGGTTTATTTGATCTA TGGGTGTGTGCAAACGCGCAAAGTGGTGAGGCGATGCAGTTTGAATTACTTGCAGCTACCTAA
Upstream 100 bases:
>100_bases TTCATGATTTGTCTGCAGTGTGGTTGGTTATAACTATGTAGGTAAGCAACCTTCTTCTGGCAGTCAGTGTGTTTTGAGAT ACGCGTTTCAAAGGGCGCTG
Downstream 100 bases:
>100_bases TTGGTCATGGAGTCAATTGGTTTAAGTTGGGAGTGTGTCAGGTTGGATGCTGAGGAGATCTCAGGGGAGTGCTTTATGTG TGATTTTTCTAAAGTAAAAG
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 740; Mature: 740
Protein sequence:
>740_residues MMGIPPLNKRFIKDFMTASDRIESLLSCMTVEEKVGQLGVFADMVRPFAPDVNPEANVRNADELLAQVRAGRVGSLFNGV GVELGLRIQQVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGIHWTYAPAVDIARD QRWGRVAEGAGEDTLLGSAFAAARVRGFQGPDLKAPDALMATPKHFAAYGAVAAGMEYANVEIALQTLRDVHLPPFQAGF AAGALTVMTAFNDINGVPASANRELLTDILRGEWCFPGLVISDYTADMELIAHGYAADARDATKKAFLAGLDLSMQSGFY AEHLPELVASGEVPMAMLDMSVRRMLQIKEVIGLFDNPYRSLDLVREADVSYISAHDALSRDAARRSIVLLKNDGPLLPL RKQAQRIALIGPFVQDRDNIEGCWTLFGDKYRYVTLEQGVRAVVDTQMLTVVPGCNIEEPISGGVSDAVQAAQAADVVVL ALGEPQRYSGEAQSRTDIVLPEVQQVLAEAVAATGKPIVVLLRNGRALALRGAVRDAKAILVTWFLGTQTGTAVTDVLFG DYNPSGRLPVSFPYTTGQQPYFYNHSRTGRPELPTMSEFKARWREVPNAPLYSFGHGLSYTRFAYSAPQLSTVSLGWDQT LLVTTRVTNIGMVVGEEVVQLYVHDRVASRVRPIRELKAFRKVYIAPGESVEVCFTLDRNALAFTNPQGVYGAEPGLFDL WVCANAQSGEAMQFELLAAT
Sequences:
>Translated_740_residues MMGIPPLNKRFIKDFMTASDRIESLLSCMTVEEKVGQLGVFADMVRPFAPDVNPEANVRNADELLAQVRAGRVGSLFNGV GVELGLRIQQVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGIHWTYAPAVDIARD QRWGRVAEGAGEDTLLGSAFAAARVRGFQGPDLKAPDALMATPKHFAAYGAVAAGMEYANVEIALQTLRDVHLPPFQAGF AAGALTVMTAFNDINGVPASANRELLTDILRGEWCFPGLVISDYTADMELIAHGYAADARDATKKAFLAGLDLSMQSGFY AEHLPELVASGEVPMAMLDMSVRRMLQIKEVIGLFDNPYRSLDLVREADVSYISAHDALSRDAARRSIVLLKNDGPLLPL RKQAQRIALIGPFVQDRDNIEGCWTLFGDKYRYVTLEQGVRAVVDTQMLTVVPGCNIEEPISGGVSDAVQAAQAADVVVL ALGEPQRYSGEAQSRTDIVLPEVQQVLAEAVAATGKPIVVLLRNGRALALRGAVRDAKAILVTWFLGTQTGTAVTDVLFG DYNPSGRLPVSFPYTTGQQPYFYNHSRTGRPELPTMSEFKARWREVPNAPLYSFGHGLSYTRFAYSAPQLSTVSLGWDQT LLVTTRVTNIGMVVGEEVVQLYVHDRVASRVRPIRELKAFRKVYIAPGESVEVCFTLDRNALAFTNPQGVYGAEPGLFDL WVCANAQSGEAMQFELLAAT >Mature_740_residues MMGIPPLNKRFIKDFMTASDRIESLLSCMTVEEKVGQLGVFADMVRPFAPDVNPEANVRNADELLAQVRAGRVGSLFNGV GVELGLRIQQVAVEESRLGIPVILAADVIHGMRTVFPIPLGEAASFEPELAERTARATAIEATAAGIHWTYAPAVDIARD QRWGRVAEGAGEDTLLGSAFAAARVRGFQGPDLKAPDALMATPKHFAAYGAVAAGMEYANVEIALQTLRDVHLPPFQAGF AAGALTVMTAFNDINGVPASANRELLTDILRGEWCFPGLVISDYTADMELIAHGYAADARDATKKAFLAGLDLSMQSGFY AEHLPELVASGEVPMAMLDMSVRRMLQIKEVIGLFDNPYRSLDLVREADVSYISAHDALSRDAARRSIVLLKNDGPLLPL RKQAQRIALIGPFVQDRDNIEGCWTLFGDKYRYVTLEQGVRAVVDTQMLTVVPGCNIEEPISGGVSDAVQAAQAADVVVL ALGEPQRYSGEAQSRTDIVLPEVQQVLAEAVAATGKPIVVLLRNGRALALRGAVRDAKAILVTWFLGTQTGTAVTDVLFG DYNPSGRLPVSFPYTTGQQPYFYNHSRTGRPELPTMSEFKARWREVPNAPLYSFGHGLSYTRFAYSAPQLSTVSLGWDQT LLVTTRVTNIGMVVGEEVVQLYVHDRVASRVRPIRELKAFRKVYIAPGESVEVCFTLDRNALAFTNPQGVYGAEPGLFDL WVCANAQSGEAMQFELLAAT
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=742, Percent_Identity=41.2398921832884, Blast_Score=547, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 80305; Mature: 80305
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGIPPLNKRFIKDFMTASDRIESLLSCMTVEEKVGQLGVFADMVRPFAPDVNPEANVRN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ADELLAQVRAGRVGSLFNGVGVELGLRIQQVAVEESRLGIPVILAADVIHGMRTVFPIPL HHHHHHHHHCCCCHHHHCCCCHHCCCEEHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCC GEAASFEPELAERTARATAIEATAAGIHWTYAPAVDIARDQRWGRVAEGAGEDTLLGSAF CCCCCCCHHHHHHHHHHHHEEHHHCCEEEEECCCHHHHHCCCCCHHHCCCCCCHHHHHHH AAARVRGFQGPDLKAPDALMATPKHFAAYGAVAAGMEYANVEIALQTLRDVHLPPFQAGF HHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHH AAGALTVMTAFNDINGVPASANRELLTDILRGEWCFPGLVISDYTADMELIAHGYAADAR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCH DATKKAFLAGLDLSMQSGFYAEHLPELVASGEVPMAMLDMSVRRMLQIKEVIGLFDNPYR HHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH SLDLVREADVSYISAHDALSRDAARRSIVLLKNDGPLLPLRKQAQRIALIGPFVQDRDNI HHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHCCEEEEECCCCCCCCCC EGCWTLFGDKYRYVTLEQGVRAVVDTQMLTVVPGCNIEEPISGGVSDAVQAAQAADVVVL CEEEEEECCCEEEEEHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEE ALGEPQRYSGEAQSRTDIVLPEVQQVLAEAVAATGKPIVVLLRNGRALALRGAVRDAKAI EECCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECHHHCCCEE LVTWFLGTQTGTAVTDVLFGDYNPSGRLPVSFPYTTGQQPYFYNHSRTGRPELPTMSEFK EEEEEECCCCCCHHHHHEECCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHH ARWREVPNAPLYSFGHGLSYTRFAYSAPQLSTVSLGWDQTLLVTTRVTNIGMVVGEEVVQ HHHHHCCCCCHHHHCCCCCCHHEEECCCCCEEEEECCCCEEEEEEEECHHHHHHHHHHHH LYVHDRVASRVRPIRELKAFRKVYIAPGESVEVCFTLDRNALAFTNPQGVYGAEPGLFDL HHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEECCCCCCCCCCCCCEEE WVCANAQSGEAMQFELLAAT EEEECCCCCCCEEEEEEECC >Mature Secondary Structure MMGIPPLNKRFIKDFMTASDRIESLLSCMTVEEKVGQLGVFADMVRPFAPDVNPEANVRN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ADELLAQVRAGRVGSLFNGVGVELGLRIQQVAVEESRLGIPVILAADVIHGMRTVFPIPL HHHHHHHHHCCCCHHHHCCCCHHCCCEEHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCC GEAASFEPELAERTARATAIEATAAGIHWTYAPAVDIARDQRWGRVAEGAGEDTLLGSAF CCCCCCCHHHHHHHHHHHHEEHHHCCEEEEECCCHHHHHCCCCCHHHCCCCCCHHHHHHH AAARVRGFQGPDLKAPDALMATPKHFAAYGAVAAGMEYANVEIALQTLRDVHLPPFQAGF HHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHH AAGALTVMTAFNDINGVPASANRELLTDILRGEWCFPGLVISDYTADMELIAHGYAADAR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHCCCCCCCH DATKKAFLAGLDLSMQSGFYAEHLPELVASGEVPMAMLDMSVRRMLQIKEVIGLFDNPYR HHHHHHHHHCCCCHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH SLDLVREADVSYISAHDALSRDAARRSIVLLKNDGPLLPLRKQAQRIALIGPFVQDRDNI HHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHCCEEEEECCCCCCCCCC EGCWTLFGDKYRYVTLEQGVRAVVDTQMLTVVPGCNIEEPISGGVSDAVQAAQAADVVVL CEEEEEECCCEEEEEHHHHHHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEE ALGEPQRYSGEAQSRTDIVLPEVQQVLAEAVAATGKPIVVLLRNGRALALRGAVRDAKAI EECCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECHHHCCCEE LVTWFLGTQTGTAVTDVLFGDYNPSGRLPVSFPYTTGQQPYFYNHSRTGRPELPTMSEFK EEEEEECCCCCCHHHHHEECCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHH ARWREVPNAPLYSFGHGLSYTRFAYSAPQLSTVSLGWDQTLLVTTRVTNIGMVVGEEVVQ HHHHHCCCCCHHHHCCCCCCHHEEECCCCCEEEEECCCCEEEEEEEECHHHHHHHHHHHH LYVHDRVASRVRPIRELKAFRKVYIAPGESVEVCFTLDRNALAFTNPQGVYGAEPGLFDL HHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCEEEECCCCCCCCCCCCCEEE WVCANAQSGEAMQFELLAAT EEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]