| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is rimI [H]
Identifier: 182682249
GI number: 182682249
Start: 1912021
End: 1912491
Strand: Direct
Name: rimI [H]
Synonym: XfasM23_1731
Alternate gene names: 182682249
Gene position: 1912021-1912491 (Clockwise)
Preceding gene: 182682248
Following gene: 182682254
Centisome position: 75.4
GC content: 48.83
Gene sequence:
>471_bases ATGAACACACTAAAGACCTCACCGCTACCGGTAAGGCTCTGTACGCTACGCGAATCGCACTTGGACAAAGTGATGGAGAT CGAACGCCGTGCCTACTGTTTTCCATGGACACGCACCATCTTTCGTAACTGCCTTCAATCCGGACATCTTGCTCTACTCA TGAAGCAAGGCCGCAATATAATCGGGTACGGGATAGTAAATATCACACGGAAAGAAGCGCATCTACTCAACATCTGTATT GCTCCGGAACAACAATCACACGGCCTCGGACGCAGCCTGCTACGTACCTTAATCAAGCTATCATGCAACAGCGGTGCACA ATGCATGTTCCTAGAAGTGCGCCCCTCTAATACCGTAGCAATTGCGCTATATCACTCCGAAGGCTTCAATGAGATTGACC GCCATCGACACTACTACCCTGCGCAAAACGGATATGAAGATGCACTAGTCATGGGCATAGAGTTTTCTTGA
Upstream 100 bases:
>100_bases AATGGAGGCATGGCCGCTGGCACAATTACGAGCCGACCCACATGCTAAGCGCGCACTGTGGCCGCAACTGCGCACAATAC GGCGTCAAGCAAAAAAGTAA
Downstream 100 bases:
>100_bases ATCGCATTACATCAGATTTTTAAAAACCGCATTACTTACAACACTGTTGTACTGCCACTCTACGAAGAAAATAATATGGC AAGAAATTCTCTACAGACCA
Product: ribosomal-protein-alanine acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S18 [H]
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MNTLKTSPLPVRLCTLRESHLDKVMEIERRAYCFPWTRTIFRNCLQSGHLALLMKQGRNIIGYGIVNITRKEAHLLNICI APEQQSHGLGRSLLRTLIKLSCNSGAQCMFLEVRPSNTVAIALYHSEGFNEIDRHRHYYPAQNGYEDALVMGIEFS
Sequences:
>Translated_156_residues MNTLKTSPLPVRLCTLRESHLDKVMEIERRAYCFPWTRTIFRNCLQSGHLALLMKQGRNIIGYGIVNITRKEAHLLNICI APEQQSHGLGRSLLRTLIKLSCNSGAQCMFLEVRPSNTVAIALYHSEGFNEIDRHRHYYPAQNGYEDALVMGIEFS >Mature_156_residues MNTLKTSPLPVRLCTLRESHLDKVMEIERRAYCFPWTRTIFRNCLQSGHLALLMKQGRNIIGYGIVNITRKEAHLLNICI APEQQSHGLGRSLLRTLIKLSCNSGAQCMFLEVRPSNTVAIALYHSEGFNEIDRHRHYYPAQNGYEDALVMGIEFS
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S18 [H]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI2367381, Length=144, Percent_Identity=38.1944444444444, Blast_Score=112, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR006464 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 17833; Mature: 17833
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLKTSPLPVRLCTLRESHLDKVMEIERRAYCFPWTRTIFRNCLQSGHLALLMKQGRNI CCCCCCCCCCEEEEHHCHHHHHHHHHHHHHCEECCHHHHHHHHHHCCCCEEEEECCCCCE IGYGIVNITRKEAHLLNICIAPEQQSHGLGRSLLRTLIKLSCNSGAQCMFLEVRPSNTVA EEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEE IALYHSEGFNEIDRHRHYYPAQNGYEDALVMGIEFS EEEEECCCCCHHHHCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MNTLKTSPLPVRLCTLRESHLDKVMEIERRAYCFPWTRTIFRNCLQSGHLALLMKQGRNI CCCCCCCCCCEEEEHHCHHHHHHHHHHHHHCEECCHHHHHHHHHHCCCCEEEEECCCCCE IGYGIVNITRKEAHLLNICIAPEQQSHGLGRSLLRTLIKLSCNSGAQCMFLEVRPSNTVA EEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCEEE IALYHSEGFNEIDRHRHYYPAQNGYEDALVMGIEFS EEEEECCCCCHHHHCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]