| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682248
Identifier: 182682248
GI number: 182682248
Start: 1911595
End: 1912020
Strand: Direct
Name: 182682248
Synonym: XfasM23_1730
Alternate gene names: NA
Gene position: 1911595-1912020 (Clockwise)
Preceding gene: 182682247
Following gene: 182682249
Centisome position: 75.39
GC content: 52.82
Gene sequence:
>426_bases ATGATCGCCACCATGAACCCAACACCATGGTCAGCCCAACAACTCTGCTGGCTGCAAGCGATAGGCTATACCGTCTATCT GGATCGCAAAACGTTTCCCGAACCAGCAAGCACAAACAAAACGCCGTCTACCATGCCTGAAAACGGCGCAATGCCTGAGA TACAAGACAGGACGTATGGGATGGAAATGCTGACCATTGCACACAGCAGAACCAATACCACACCAGTACCCCAACGATGG GGACATATCAGTATTCCCGACAAACTCCAAATCGCACTGCTACGCGCCTGTGCCGCTGGCCCCTCAGATCCACAGATACA ACAAATAATGGAGGCATGGCCGCTGGCACAATTACGAGCCGACCCACATGCTAAGCGCGCACTGTGGCCGCAACTGCGCA CAATACGGCGTCAAGCAAAAAAGTAA
Upstream 100 bases:
>100_bases ACCCACAACGGGTATTACTGACAATGGCTGTCCTGTACACCCTCTCCGGGCCAATACTGTGGCTGTGGCGATACCAACAC AAAAAGAGAGGCGAAACAAA
Downstream 100 bases:
>100_bases ATGAACACACTAAAGACCTCACCGCTACCGGTAAGGCTCTGTACGCTACGCGAATCGCACTTGGACAAAGTGATGGAGAT CGAACGCCGTGCCTACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MIATMNPTPWSAQQLCWLQAIGYTVYLDRKTFPEPASTNKTPSTMPENGAMPEIQDRTYGMEMLTIAHSRTNTTPVPQRW GHISIPDKLQIALLRACAAGPSDPQIQQIMEAWPLAQLRADPHAKRALWPQLRTIRRQAKK
Sequences:
>Translated_141_residues MIATMNPTPWSAQQLCWLQAIGYTVYLDRKTFPEPASTNKTPSTMPENGAMPEIQDRTYGMEMLTIAHSRTNTTPVPQRW GHISIPDKLQIALLRACAAGPSDPQIQQIMEAWPLAQLRADPHAKRALWPQLRTIRRQAKK >Mature_141_residues MIATMNPTPWSAQQLCWLQAIGYTVYLDRKTFPEPASTNKTPSTMPENGAMPEIQDRTYGMEMLTIAHSRTNTTPVPQRW GHISIPDKLQIALLRACAAGPSDPQIQQIMEAWPLAQLRADPHAKRALWPQLRTIRRQAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15959; Mature: 15959
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATMNPTPWSAQQLCWLQAIGYTVYLDRKTFPEPASTNKTPSTMPENGAMPEIQDRTYG CCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC MEMLTIAHSRTNTTPVPQRWGHISIPDKLQIALLRACAAGPSDPQIQQIMEAWPLAQLRA HHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHC DPHAKRALWPQLRTIRRQAKK CCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIATMNPTPWSAQQLCWLQAIGYTVYLDRKTFPEPASTNKTPSTMPENGAMPEIQDRTYG CCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC MEMLTIAHSRTNTTPVPQRWGHISIPDKLQIALLRACAAGPSDPQIQQIMEAWPLAQLRA HHHEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHC DPHAKRALWPQLRTIRRQAKK CCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA