Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682210
Identifier: 182682210
GI number: 182682210
Start: 1866519
End: 1867127
Strand: Reverse
Name: 182682210
Synonym: XfasM23_1689
Alternate gene names: NA
Gene position: 1867127-1866519 (Counterclockwise)
Preceding gene: 182682211
Following gene: 182682209
Centisome position: 73.63
GC content: 62.56
Gene sequence:
>609_bases ATGGGTTCTGTGACGACCATGACCACCGCCGAATACGCCAAGCACCGCGGCGTCAGCGACTCCTACATCCGCCGGATGCG GCGCAAAGGCAATGTGATCCTGGGCGAGGATGGCCGCATCCACGTGAACGCCAGTGACACCCTGCTGGATGGCATGACCC ATCCCGTGCAGGGCGGCAAGCGCGGCATGACCGACCCTCACGCCGCCGCCGTACCCACCTTCACCGTGATGACCCCACAG GGCATTCCGGTGCAAGAAGCGGTCCGCCGCGAGCGCGTCGCGCGTGCACTCATGGCTGAACTTGATCTGGGCAAGCAAGC CGAACAACTGACCTGCGTAGATGAGGTCAACCGCGCCGTCTTCACCCTGGTACGCCAAGCACTGAACCAGCTCCGCGGCA TGAGTGGCCGACTACGCAAGACACTGGCGGCAGAGACCGATGCGGGCAAAGTCACCCAGATCATTGATACCGACGTCGCC CACATCTGCAAGCAAATGCAGGACGCCGCCACGACCCTGCTGAAAACCAACACACCCGACGCCGAACCCGTCCAAGCCAA CGACACCAACGACACCCTCGCATTCGAGGAAGAAGGAGTATCCGGATGA
Upstream 100 bases:
>100_bases GGTTCCTCCGTGGGGGTCTGCACCGCGGGCAATTCGGACCCCGTTTTGCGTGCATGTCCTGGTTCCAGATTTTGGTTCCG GTAGGGGCGGGGGGGTTCCG
Downstream 100 bases:
>100_bases GCCTCGACGACTTCCCCGACATCCAACTGGCCAACGCTTACCACACCGTTTCCACCGCCTGGCAGCACGCCTGGGAAGTC CCCCCGCGCCTGGAGATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGSVTTMTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDPHAAAVPTFTVMTPQ GIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVA HICKQMQDAATTLLKTNTPDAEPVQANDTNDTLAFEEEGVSG
Sequences:
>Translated_202_residues MGSVTTMTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDPHAAAVPTFTVMTPQ GIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVA HICKQMQDAATTLLKTNTPDAEPVQANDTNDTLAFEEEGVSG >Mature_201_residues GSVTTMTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGKRGMTDPHAAAVPTFTVMTPQG IPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAVFTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAH ICKQMQDAATTLLKTNTPDAEPVQANDTNDTLAFEEEGVSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21929; Mature: 21798
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVTTMTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGK CCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCEEEECCCHHHHHCCCCCCCCCC RGMTDPHAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAV CCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTLLKTNTPD HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEPVQANDTNDTLAFEEEGVSG CCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure GSVTTMTTAEYAKHRGVSDSYIRRMRRKGNVILGEDGRIHVNASDTLLDGMTHPVQGGK CCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCEEEECCCHHHHHCCCCCCCCCC RGMTDPHAAAVPTFTVMTPQGIPVQEAVRRERVARALMAELDLGKQAEQLTCVDEVNRAV CCCCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FTLVRQALNQLRGMSGRLRKTLAAETDAGKVTQIIDTDVAHICKQMQDAATTLLKTNTPD HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEPVQANDTNDTLAFEEEGVSG CCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA