Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682190
Identifier: 182682190
GI number: 182682190
Start: 1845825
End: 1846733
Strand: Reverse
Name: 182682190
Synonym: XfasM23_1669
Alternate gene names: NA
Gene position: 1846733-1845825 (Counterclockwise)
Preceding gene: 182682191
Following gene: 182682185
Centisome position: 72.83
GC content: 51.38
Gene sequence:
>909_bases ATGAGTGAAATCCTTAAAGTCCCGGCGAAGGCTGGTGCGCAATGGTTGTGGGCTGGCTTTGCATTGCTGTGGCGTGCGCC GTTGCGTTTGGGGGGGCTTGGCCTGTTGTGGGGCATGTTTTCCTCATTGCTGATGCTGGTGGGCTTCAAGTGGCCAAGCG TGCTGTATTACGTGCTGTTTCTGATGTTTCTAGTCACCCCACTACTGACGGGGGGAGTGCTGTGGGCGTTACGCGAGGTG GATCAGGGGCGTACTGCGCGCCCGGGAGATTTATTGCAGGGGTTGTACGATGGACGGGTACCGCAGTTGCTGATGGCGTT GTTGCCGCAATTGCTAGCGCTGGTTGTTACATTTCTAGTGATTCACTATAGCTCTTTGCAAGGCTTTTCCAAGTTTCTTG GGGATTTAATGACCATGCATCAGCCAGGTGCGCAGATCAATCCGGAGGCAATCTATCAATCATATGTTGATCTGCCTATG CCACTTATTCGGCTGTGGTTGCTGTTTTTGTGCGTGATCTTCGTGGTGGTGGCGATGACCTTGTTTGTGATGCCGCCGCA GGTGATGTTCCAGCGTGATAATGGGTTACATGCGTTAAAGCTGAGTTTGTATGCTTGCTTGCGCAATCTTCCAGCGTTAT TGGTGTTTGCTGTGTTGGCCTGCATCGTGACGATTGTGGTGTTTGTTATCGTATCTTTTATCGCAATTGTTCCTGCAGCA TTCATTGCAGCTGTACTAGGTCGCGGCGATGAAGTGTTTTTTATTAATTTTATTCATCAAGTAGTGATGCAGCTGCTTTG GATGCCGGTGTTCATTCCCGTCTTTAACGGGGCGGTGTACGCGGCGTGGAAACAGATGCTTGCTCACGACGCGTTGCCGT CGTCGCCTGATGAGGTGTTGGCTGCTTAG
Upstream 100 bases:
>100_bases ATCTTGTATTCCGAAGCCGTCTCTATCTGTGCTATCTGGAAAGGGTGATAATCGTCGCAATGTGCTGCGTCTTCTGGCAC GGTATTGGAGTCGTAAGTCA
Downstream 100 bases:
>100_bases TAGGCTTGGGGAGTAAATGTGGGGGCGTGCTGTTGCACGTCCAACGTTGGTGATGCCTCAAGCCTCAAACCGTTTTCGGG CGGGTGACCGCCCAGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSEILKVPAKAGAQWLWAGFALLWRAPLRLGGLGLLWGMFSSLLMLVGFKWPSVLYYVLFLMFLVTPLLTGGVLWALREV DQGRTARPGDLLQGLYDGRVPQLLMALLPQLLALVVTFLVIHYSSLQGFSKFLGDLMTMHQPGAQINPEAIYQSYVDLPM PLIRLWLLFLCVIFVVVAMTLFVMPPQVMFQRDNGLHALKLSLYACLRNLPALLVFAVLACIVTIVVFVIVSFIAIVPAA FIAAVLGRGDEVFFINFIHQVVMQLLWMPVFIPVFNGAVYAAWKQMLAHDALPSSPDEVLAA
Sequences:
>Translated_302_residues MSEILKVPAKAGAQWLWAGFALLWRAPLRLGGLGLLWGMFSSLLMLVGFKWPSVLYYVLFLMFLVTPLLTGGVLWALREV DQGRTARPGDLLQGLYDGRVPQLLMALLPQLLALVVTFLVIHYSSLQGFSKFLGDLMTMHQPGAQINPEAIYQSYVDLPM PLIRLWLLFLCVIFVVVAMTLFVMPPQVMFQRDNGLHALKLSLYACLRNLPALLVFAVLACIVTIVVFVIVSFIAIVPAA FIAAVLGRGDEVFFINFIHQVVMQLLWMPVFIPVFNGAVYAAWKQMLAHDALPSSPDEVLAA >Mature_301_residues SEILKVPAKAGAQWLWAGFALLWRAPLRLGGLGLLWGMFSSLLMLVGFKWPSVLYYVLFLMFLVTPLLTGGVLWALREVD QGRTARPGDLLQGLYDGRVPQLLMALLPQLLALVVTFLVIHYSSLQGFSKFLGDLMTMHQPGAQINPEAIYQSYVDLPMP LIRLWLLFLCVIFVVVAMTLFVMPPQVMFQRDNGLHALKLSLYACLRNLPALLVFAVLACIVTIVVFVIVSFIAIVPAAF IAAVLGRGDEVFFINFIHQVVMQLLWMPVFIPVFNGAVYAAWKQMLAHDALPSSPDEVLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33575; Mature: 33444
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILKVPAKAGAQWLWAGFALLWRAPLRLGGLGLLWGMFSSLLMLVGFKWPSVLYYVLF CCHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LMFLVTPLLTGGVLWALREVDQGRTARPGDLLQGLYDGRVPQLLMALLPQLLALVVTFLV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IHYSSLQGFSKFLGDLMTMHQPGAQINPEAIYQSYVDLPMPLIRLWLLFLCVIFVVVAMT HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFVMPPQVMFQRDNGLHALKLSLYACLRNLPALLVFAVLACIVTIVVFVIVSFIAIVPAA HHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIAAVLGRGDEVFFINFIHQVVMQLLWMPVFIPVFNGAVYAAWKQMLAHDALPSSPDEVL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHH AA CC >Mature Secondary Structure SEILKVPAKAGAQWLWAGFALLWRAPLRLGGLGLLWGMFSSLLMLVGFKWPSVLYYVLF CHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LMFLVTPLLTGGVLWALREVDQGRTARPGDLLQGLYDGRVPQLLMALLPQLLALVVTFLV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH IHYSSLQGFSKFLGDLMTMHQPGAQINPEAIYQSYVDLPMPLIRLWLLFLCVIFVVVAMT HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFVMPPQVMFQRDNGLHALKLSLYACLRNLPALLVFAVLACIVTIVVFVIVSFIAIVPAA HHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIAAVLGRGDEVFFINFIHQVVMQLLWMPVFIPVFNGAVYAAWKQMLAHDALPSSPDEVL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHH AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA