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The map label for this gene is perM [C]

Identifier: 182682169

GI number: 182682169

Start: 1826399

End: 1827556

Strand: Reverse

Name: perM [C]

Synonym: XfasM23_1648

Alternate gene names: 182682169

Gene position: 1827556-1826399 (Counterclockwise)

Preceding gene: 182682170

Following gene: 182682168

Centisome position: 72.07

GC content: 51.04

Gene sequence:

>1158_bases
ATGATGTTTTCGCCTGAAGTTGAAATTGCCCGGTTTCTGCGTCGTTTGAAGTGGTACGTGTTGGTTGGGGGCGTCCTGTG
GATGGCGTGGTTGCTCACTCCCGTGCTGATTCCATTTGTGCTGTCGGTTTTCCTGGGGTGGTTGGCAGATCCGTTGGTGA
AAAGGGTTGAATGGGTGGGTGTTTCACGTGCTATGGCTGTCTGTTTCGTATTTTTTCTAGTCGTGCTGTTACTGGTGCTG
GTGCTGATGATTTTTGTGCCTCTGATTGAGCGTCAAGTGGTGACGTTGATTAACACGTTTCCACAGATGCATGATTGGGT
GGTGAATACCGTGATTCCCTGGGTCGAGCAAAAAACCGGGTCACAGTTGAGGACTTGGTTAGATCCAGAGCAAATGATCC
AATGGATGCACAGTAATTGGGAGCAGGCGGGGGGCGTGGCCAGGGGGCTTTTCGGTTATGTGTCGCGCTCTGGTTTCGTC
ATGGTGACGTGGGTCATCAACTTAGCGCTGTTGCCAATTTTGAGCTTCTATTTTTTGCGGGATTGGGATAAGTGGGTTGA
GCGCGTTGCGGCTGCGATTCCGCGCGCCTATATCGGTACCGTTAGCCGTTTGGCCACAGAGGCAAATGAGGTGCTTGGCG
CTTTCATCCGTGGTCAGTTCCTTGTCATGCTGGCCTTAGGTGCGATTTATGCTGTTGGTTTGTCCTTGGTAGGGCTAAGG
CTTGGTTTGTTGATTGGTTTGATTGCTGGGCTGATTAGTTTTATCCCGTATTTAGGTGCGATCACTGGCGTGGTCCTGGC
ACTCATTGCCGTCATCGTGCAGGTGCATGGGTTGGATCTGCAGTTGTTGGTTTTGGTGGGTGTTGTCTTTGGGGTTGGCC
AGCTTCTGGAGAGTTATGTGCTGACTCCGCGGATTGTTGGCGACAAAATTGGTTTGCATCCTGTGGCAGTCATTTTTTCG
GTGATGGCTGGCGGTCAGTTGTTCGGTTTCGTGGGTATGTTACTGGCGCTGCCTGTCGCTGCTGTGGTGAATGTGCTGTT
GCGTTATGCGCATGAGCGTTATATCGAAAGTGAGTTTTATAAAGGTCAGTATTTGGCGGTCGCGTTGCATGAGTGTAAAA
GCGATGAGAACTGTGATGGCAAAAAGGACGCGGTGTGA

Upstream 100 bases:

>100_bases
TGAATCGCATGTTGGGTGGCGATAGTGCGTTGCAGCCGGTTGCTGCAGCCACGTTGGAGTCGCCACAGAGTGAAGGTGAG
CTTGTGGAGTATGTTCTGAA

Downstream 100 bases:

>100_bases
GTGTTTCGCAGCTTCCGCTGGCCTTGCGTTATTCTTCAGATCAGCGTTTTGAAACCTATCTGCACGCTCCCTCTGGTTTG
ATTGCGCAACTGCGTGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MMFSPEVEIARFLRRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVEWVGVSRAMAVCFVFFLVVLLLVL
VLMIFVPLIERQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPEQMIQWMHSNWEQAGGVARGLFGYVSRSGFV
MVTWVINLALLPILSFYFLRDWDKWVERVAAAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLR
LGLLIGLIAGLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKIGLHPVAVIFS
VMAGGQLFGFVGMLLALPVAAVVNVLLRYAHERYIESEFYKGQYLAVALHECKSDENCDGKKDAV

Sequences:

>Translated_385_residues
MMFSPEVEIARFLRRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVEWVGVSRAMAVCFVFFLVVLLLVL
VLMIFVPLIERQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPEQMIQWMHSNWEQAGGVARGLFGYVSRSGFV
MVTWVINLALLPILSFYFLRDWDKWVERVAAAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLR
LGLLIGLIAGLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKIGLHPVAVIFS
VMAGGQLFGFVGMLLALPVAAVVNVLLRYAHERYIESEFYKGQYLAVALHECKSDENCDGKKDAV
>Mature_385_residues
MMFSPEVEIARFLRRLKWYVLVGGVLWMAWLLTPVLIPFVLSVFLGWLADPLVKRVEWVGVSRAMAVCFVFFLVVLLLVL
VLMIFVPLIERQVVTLINTFPQMHDWVVNTVIPWVEQKTGSQLRTWLDPEQMIQWMHSNWEQAGGVARGLFGYVSRSGFV
MVTWVINLALLPILSFYFLRDWDKWVERVAAAIPRAYIGTVSRLATEANEVLGAFIRGQFLVMLALGAIYAVGLSLVGLR
LGLLIGLIAGLISFIPYLGAITGVVLALIAVIVQVHGLDLQLLVLVGVVFGVGQLLESYVLTPRIVGDKIGLHPVAVIFS
VMAGGQLFGFVGMLLALPVAAVVNVLLRYAHERYIESEFYKGQYLAVALHECKSDENCDGKKDAV

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=337, Percent_Identity=26.1127596439169, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082271, Length=313, Percent_Identity=24.2811501597444, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42797; Mature: 42797

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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CCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]