Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682146
Identifier: 182682146
GI number: 182682146
Start: 1800633
End: 1802687
Strand: Reverse
Name: 182682146
Synonym: XfasM23_1624
Alternate gene names: NA
Gene position: 1802687-1800633 (Counterclockwise)
Preceding gene: 182682147
Following gene: 182682143
Centisome position: 71.09
GC content: 42.09
Gene sequence:
>2055_bases ATGATTAAAGTGACTGCTATTTACCAGCAAGATCCTCCACCATTCCGTCAATGGCATCTGCTGATGCCTATTATGTTGCT TGCTTTAGGTTTACTTTTAATACTGGCAACACATGTTAATTACTTCCGCGGCGTGCCTGGTGATCTAGGGGATGCTCGTT TCAATGGCATTATTCTTGAGTATTTTTATAGATGGGTGAGTGGCGGTAATGAATCACTATTGAGTCCTGGATTTTTTTAT CCGATGCCTGGTGCTCTTGCTTTTAGCGATAATCATTGGGGAACTGCCTGGATCTATTCGATCTATCGCATCTTAGGCTT TGATCGGTATGTTGCTTATGATCTTTGGTATTTGACAGGCTATCTGCTGAATTTCGCATCAATGCACTTTGTGCTTCGGA AATTGGGCTACTCTGTTGCTGCTGCTGCTTGGGGAGCGTTTTTCTTTACTTTCGGGATGCCAACCGTTGCCCATCATGTA GGTCATGCTCAATTAAGCTACTGTTTTCCAGCGCCTTTGGCGCTGCTGTGTTGGCAGCGCTTTCGCCAGTTGGGTGCTCC ACTGTGGTTGGGTTGGGGGGCGCTAGCAGTGGCATTGCAATTTTATGTCTCTATTTATCTCGGGTATTTCTTGTCATTGT TGTTACTCGCTTGGATAGCTGCGCAATGCTGGATTGAAAGGACATCTCCTTTAACCTGGTTTGCTGGTTTCGGTGCTTGG GTGAATTCAAACAGGAGAGATGCTTTATTTCTTTTCCTATTACTAGGTTTAGTCGTTACCAGTCTGTTAGTTTTAATGTA TCCCTATGTTTTATATTCAAAATTATATGGTTTCTCGCGTGATTCGCATGACATCTCTTCGATGTTACCGCGTATCAGCA GCTATTTTATTTCTGATATCTCGACGATATGGCATACCTTCAGTGACCACGTAGGCAAGGATTTGCCTATGCGCCATGAG CATCAGATGTTTGTGGGTCTAGGTGCGCTTTTGTTGGTTGTACTCGCGTTAACCCTCAATAGATCGCCAATAGTGAATGT TTCTATTATATCTTTGGCGTTATTGATGTTATTTACCTTAAATATTAAAGATCAATCATTCTATCTATTATTTGCTGATT TCCCTGGAGTTAATTCGATTCGAGCTGTATCTCGTATCATTCTAATATTAATGATTCCACTTGCGATTCTGATTGCCTCT GGAATAGATGCGGCACGCTTAAAAAGCGGAAGATGGATCATATTAGCAGCTTCACTGTGCGTAGCGCTCATGATTGAAAC TATTCTAATGAAAGGCCAGTTTTATGATATTGCTGAAGCGAAAATGCGTGCCGCAACGCTCGATCAAAAGTTGCCTGCAC ATCTGAATGCTTCCACAGTGATTTTTGTTCCTGTCAATACATCTGAGCCATCCTTTATGACCGAGTTGGATGGTATGTTG CTTGCTCAAGAGCGTGGATTGAAGACCTTGAACGGATATTCTGGAAATTTTCCTAATGGTTATTCAACGAATGATCCTAC GCAACCGGCGTGCTTGCAGGCTGTTTCGCGTATGGAATCAGCACGGCGTTTTTATGCTGGGCACCTTGGGGAAAATTTGG ATATGGGTATTTTTAAGTATTTTGTTGCATTGGATACTCCTAATTGTTCAGAGGGAGATTGGCGTGAAATTCCAAACGAG CAAATAAAGCGTATCAAGCTTGGGATTATCAATGTAAAAAAACTGTGTGATGGACGCTATGAAGTCAAGGTCAAGGTAGA TAATCAAAGTGAGTATCCTTTGCTTGTATTGCCTAAGGAGCATCCATTGCGGTTATCTTGGCAGGTCCATCCGAAGGGGA CTACTCCTAAAATTGATGCTTGGGTTCCCCGTGTCGATTTTCCTCAAGGAGAGGATATTACAGCAGGTGCTCAGCGATAT ATTCGCTTCCCGATTAATGTTGATGAAAGTGGTGATGTGATACTTAGTGTTTCTTTGGTTTTGGAGGGGCGTGTTTGGTT ACATGATCAAGGATTTTCTATTGTTCAAAAGAAATTAAATGAGAAATATAAATGA
Upstream 100 bases:
>100_bases TGATGGGAAATTATACGGATACATTGACAGATCCTTTCCGTGAAAGTCGGATGAAATTAGATTATCGTTGTCAATAAACA TAAGGTATAAGAAATATCAT
Downstream 100 bases:
>100_bases GTTTGGCTTTATCTATTAGTAGTTATTTCTATTTTTATTATGTGGTTTCGTGTAAATGCAGTGGATGTTGATCTGTATCT GTATTCATTTATGCATTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MIKVTAIYQQDPPPFRQWHLLMPIMLLALGLLLILATHVNYFRGVPGDLGDARFNGIILEYFYRWVSGGNESLLSPGFFY PMPGALAFSDNHWGTAWIYSIYRILGFDRYVAYDLWYLTGYLLNFASMHFVLRKLGYSVAAAAWGAFFFTFGMPTVAHHV GHAQLSYCFPAPLALLCWQRFRQLGAPLWLGWGALAVALQFYVSIYLGYFLSLLLLAWIAAQCWIERTSPLTWFAGFGAW VNSNRRDALFLFLLLGLVVTSLLVLMYPYVLYSKLYGFSRDSHDISSMLPRISSYFISDISTIWHTFSDHVGKDLPMRHE HQMFVGLGALLLVVLALTLNRSPIVNVSIISLALLMLFTLNIKDQSFYLLFADFPGVNSIRAVSRIILILMIPLAILIAS GIDAARLKSGRWIILAASLCVALMIETILMKGQFYDIAEAKMRAATLDQKLPAHLNASTVIFVPVNTSEPSFMTELDGML LAQERGLKTLNGYSGNFPNGYSTNDPTQPACLQAVSRMESARRFYAGHLGENLDMGIFKYFVALDTPNCSEGDWREIPNE QIKRIKLGIINVKKLCDGRYEVKVKVDNQSEYPLLVLPKEHPLRLSWQVHPKGTTPKIDAWVPRVDFPQGEDITAGAQRY IRFPINVDESGDVILSVSLVLEGRVWLHDQGFSIVQKKLNEKYK
Sequences:
>Translated_684_residues MIKVTAIYQQDPPPFRQWHLLMPIMLLALGLLLILATHVNYFRGVPGDLGDARFNGIILEYFYRWVSGGNESLLSPGFFY PMPGALAFSDNHWGTAWIYSIYRILGFDRYVAYDLWYLTGYLLNFASMHFVLRKLGYSVAAAAWGAFFFTFGMPTVAHHV GHAQLSYCFPAPLALLCWQRFRQLGAPLWLGWGALAVALQFYVSIYLGYFLSLLLLAWIAAQCWIERTSPLTWFAGFGAW VNSNRRDALFLFLLLGLVVTSLLVLMYPYVLYSKLYGFSRDSHDISSMLPRISSYFISDISTIWHTFSDHVGKDLPMRHE HQMFVGLGALLLVVLALTLNRSPIVNVSIISLALLMLFTLNIKDQSFYLLFADFPGVNSIRAVSRIILILMIPLAILIAS GIDAARLKSGRWIILAASLCVALMIETILMKGQFYDIAEAKMRAATLDQKLPAHLNASTVIFVPVNTSEPSFMTELDGML LAQERGLKTLNGYSGNFPNGYSTNDPTQPACLQAVSRMESARRFYAGHLGENLDMGIFKYFVALDTPNCSEGDWREIPNE QIKRIKLGIINVKKLCDGRYEVKVKVDNQSEYPLLVLPKEHPLRLSWQVHPKGTTPKIDAWVPRVDFPQGEDITAGAQRY IRFPINVDESGDVILSVSLVLEGRVWLHDQGFSIVQKKLNEKYK >Mature_684_residues MIKVTAIYQQDPPPFRQWHLLMPIMLLALGLLLILATHVNYFRGVPGDLGDARFNGIILEYFYRWVSGGNESLLSPGFFY PMPGALAFSDNHWGTAWIYSIYRILGFDRYVAYDLWYLTGYLLNFASMHFVLRKLGYSVAAAAWGAFFFTFGMPTVAHHV GHAQLSYCFPAPLALLCWQRFRQLGAPLWLGWGALAVALQFYVSIYLGYFLSLLLLAWIAAQCWIERTSPLTWFAGFGAW VNSNRRDALFLFLLLGLVVTSLLVLMYPYVLYSKLYGFSRDSHDISSMLPRISSYFISDISTIWHTFSDHVGKDLPMRHE HQMFVGLGALLLVVLALTLNRSPIVNVSIISLALLMLFTLNIKDQSFYLLFADFPGVNSIRAVSRIILILMIPLAILIAS GIDAARLKSGRWIILAASLCVALMIETILMKGQFYDIAEAKMRAATLDQKLPAHLNASTVIFVPVNTSEPSFMTELDGML LAQERGLKTLNGYSGNFPNGYSTNDPTQPACLQAVSRMESARRFYAGHLGENLDMGIFKYFVALDTPNCSEGDWREIPNE QIKRIKLGIINVKKLCDGRYEVKVKVDNQSEYPLLVLPKEHPLRLSWQVHPKGTTPKIDAWVPRVDFPQGEDITAGAQRY IRFPINVDESGDVILSVSLVLEGRVWLHDQGFSIVQKKLNEKYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77237; Mature: 77237
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVTAIYQQDPPPFRQWHLLMPIMLLALGLLLILATHVNYFRGVPGDLGDARFNGIILE CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH YFYRWVSGGNESLLSPGFFYPMPGALAFSDNHWGTAWIYSIYRILGFDRYVAYDLWYLTG HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH YLLNFASMHFVLRKLGYSVAAAAWGAFFFTFGMPTVAHHVGHAQLSYCFPAPLALLCWQR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHCCCHHEEHHCCHHHHHHHHHH FRQLGAPLWLGWGALAVALQFYVSIYLGYFLSLLLLAWIAAQCWIERTSPLTWFAGFGAW HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHH VNSNRRDALFLFLLLGLVVTSLLVLMYPYVLYSKLYGFSRDSHDISSMLPRISSYFISDI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH STIWHTFSDHVGKDLPMRHEHQMFVGLGALLLVVLALTLNRSPIVNVSIISLALLMLFTL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHC NIKDQSFYLLFADFPGVNSIRAVSRIILILMIPLAILIASGIDAARLKSGRWIILAASLC CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEHHHHH VALMIETILMKGQFYDIAEAKMRAATLDQKLPAHLNASTVIFVPVNTSEPSFMTELDGML HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHH LAQERGLKTLNGYSGNFPNGYSTNDPTQPACLQAVSRMESARRFYAGHLGENLDMGIFKY HHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH FVALDTPNCSEGDWREIPNEQIKRIKLGIINVKKLCDGRYEVKVKVDNQSEYPLLVLPKE HHEECCCCCCCCCHHHCCHHHHHHHHHHHEEHHHHCCCCEEEEEEECCCCCCCEEEECCC HPLRLSWQVHPKGTTPKIDAWVPRVDFPQGEDITAGAQRYIRFPINVDESGDVILSVSLV CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCEEEEEEEE LEGRVWLHDQGFSIVQKKLNEKYK EECEEEEECCCHHHHHHHHHCCCC >Mature Secondary Structure MIKVTAIYQQDPPPFRQWHLLMPIMLLALGLLLILATHVNYFRGVPGDLGDARFNGIILE CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH YFYRWVSGGNESLLSPGFFYPMPGALAFSDNHWGTAWIYSIYRILGFDRYVAYDLWYLTG HHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH YLLNFASMHFVLRKLGYSVAAAAWGAFFFTFGMPTVAHHVGHAQLSYCFPAPLALLCWQR HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHCCCHHEEHHCCHHHHHHHHHH FRQLGAPLWLGWGALAVALQFYVSIYLGYFLSLLLLAWIAAQCWIERTSPLTWFAGFGAW HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHH VNSNRRDALFLFLLLGLVVTSLLVLMYPYVLYSKLYGFSRDSHDISSMLPRISSYFISDI HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH STIWHTFSDHVGKDLPMRHEHQMFVGLGALLLVVLALTLNRSPIVNVSIISLALLMLFTL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHC NIKDQSFYLLFADFPGVNSIRAVSRIILILMIPLAILIASGIDAARLKSGRWIILAASLC CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEHHHHH VALMIETILMKGQFYDIAEAKMRAATLDQKLPAHLNASTVIFVPVNTSEPSFMTELDGML HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHH LAQERGLKTLNGYSGNFPNGYSTNDPTQPACLQAVSRMESARRFYAGHLGENLDMGIFKY HHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH FVALDTPNCSEGDWREIPNEQIKRIKLGIINVKKLCDGRYEVKVKVDNQSEYPLLVLPKE HHEECCCCCCCCCHHHCCHHHHHHHHHHHEEHHHHCCCCEEEEEEECCCCCCCEEEECCC HPLRLSWQVHPKGTTPKIDAWVPRVDFPQGEDITAGAQRYIRFPINVDESGDVILSVSLV CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCCCCCEEEEEEEE LEGRVWLHDQGFSIVQKKLNEKYK EECEEEEECCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA