Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is cutA [H]
Identifier: 182682143
GI number: 182682143
Start: 1797357
End: 1797695
Strand: Reverse
Name: cutA [H]
Synonym: XfasM23_1621
Alternate gene names: 182682143
Gene position: 1797695-1797357 (Counterclockwise)
Preceding gene: 182682146
Following gene: 182682142
Centisome position: 70.9
GC content: 49.26
Gene sequence:
>339_bases ATGGCATCTGATGTATACCTGATTTTCAGCACCTGCCCTGATTTGCCGAGCGCTGAAATTATTTCTCGCGTATTGGTACA GGAAAGGTTGGCAGCTTGTGTGACTCAATTACCGGGTGCGATCTCAACCTATCGTTGGCAGGGAAAGATCGAGACGACGC AAGAGATCCAGTTACTGATTAAGACCAACGCTGTGCATGTGAACGCCGCTATTACGCGTTTGTGCGCGCTGCATCCTTAT CGACTGCCGGAGGCAATCGCAGTCCAGGTCAGCGTGGGATTACCTGAGTACTTGACTTGGATTAATACAGAGATTGACGA GGAATACTCTCTACCATGA
Upstream 100 bases:
>100_bases TCGCTGAATAGGCTATTAAGTATGTCGTTATTCACATTAATCTCACAAATATATCTGTGCCCGATATCAGAGAGTCGTTC AGCCTTTACACTGTGATCTT
Downstream 100 bases:
>100_bases CGTTCTTGCATCGTTTAGCCACACTATGTGTATTGGCACTGATTTCTTTTCCTGTAGTCGCCGTCAGCGAAACGGACCTA CTTCCGGTGGAAAAGGCTTT
Product: CutA1 divalent ion tolerance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MASDVYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAISTYRWQGKIETTQEIQLLIKTNAVHVNAAITRLCALHPY RLPEAIAVQVSVGLPEYLTWINTEIDEEYSLP
Sequences:
>Translated_112_residues MASDVYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAISTYRWQGKIETTQEIQLLIKTNAVHVNAAITRLCALHPY RLPEAIAVQVSVGLPEYLTWINTEIDEEYSLP >Mature_111_residues ASDVYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAISTYRWQGKIETTQEIQLLIKTNAVHVNAAITRLCALHPYR LPEAIAVQVSVGLPEYLTWINTEIDEEYSLP
Specific function: Involved in resistance toward heavy metals [H]
COG id: COG1324
COG function: function code P; Uncharacterized protein involved in tolerance to divalent cations
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutA family [H]
Homologues:
Organism=Homo sapiens, GI62526024, Length=93, Percent_Identity=41.9354838709677, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI62526022, Length=93, Percent_Identity=41.9354838709677, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI7706244, Length=93, Percent_Identity=41.9354838709677, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI62198241, Length=93, Percent_Identity=41.9354838709677, Blast_Score=77, Evalue=3e-15, Organism=Homo sapiens, GI62526026, Length=94, Percent_Identity=41.4893617021277, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1790579, Length=99, Percent_Identity=37.3737373737374, Blast_Score=84, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641937, Length=93, Percent_Identity=37.6344086021505, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004323 - InterPro: IPR011322 [H]
Pfam domain/function: PF03091 CutA1 [H]
EC number: NA
Molecular weight: Translated: 12485; Mature: 12353
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASDVYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAISTYRWQGKIETTQEIQLLI CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHEEEEE KTNAVHVNAAITRLCALHPYRLPEAIAVQVSVGLPEYLTWINTEIDEEYSLP ECCEEEHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ASDVYLIFSTCPDLPSAEIISRVLVQERLAACVTQLPGAISTYRWQGKIETTQEIQLLI CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHEEEEE KTNAVHVNAAITRLCALHPYRLPEAIAVQVSVGLPEYLTWINTEIDEEYSLP ECCEEEHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA