| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682135
Identifier: 182682135
GI number: 182682135
Start: 1788583
End: 1789059
Strand: Direct
Name: 182682135
Synonym: XfasM23_1613
Alternate gene names: NA
Gene position: 1788583-1789059 (Clockwise)
Preceding gene: 182682134
Following gene: 182682136
Centisome position: 70.54
GC content: 54.3
Gene sequence:
>477_bases ATGGGCACGTATCGAGCCGCAAAGATCTGCCCCAATGGACACGTCGCAACGACTGCTGCAGACCAGAACCATGAATTGCG GGAAGCGTTCTGCTCCCAGTCTGGTGAAGCGACCATCATCCAGTACCCAAAATGCAGCGCTTCCATTGGCGGTGATGACT ACGTTGAAGGCGTTCTCGGATTTGGCAGAGACTACGAGCCGCCCACCTTCTGCAACAACTGCGGCAGTCGGTTCCCTTGG GCTGAACGCAAGATTGCTGGCACTGTTGAGCTTGTTGAAGCAGACGCTAACCTGACGCCTGACGAAGTTCAACAGTTCCG TACCGACCTAACCAAACTGACCAAAGACAGTCCCAAGACCCAAGTTGCCTCCCTTCGCTTCAAGAAGGTGATGGCGAAAG TCAGAACTTCGGTGGCGTCTGGTGTGCGTGACATCGTTGTGGATGTACTCAGCGAAGCAGCCAAGAAAGCGATTTAG
Upstream 100 bases:
>100_bases GAGCGGTTGAATGCACTAGTCTTGAAAACTAGCAAGGGGGTAACCCCTTCCAGGGTTCGAATCCCTGACCCACCGCCATT ACAATAGCCAAGGCAGCGCA
Downstream 100 bases:
>100_bases GGAGCTTAAAAGGAATGGCGATGACTCTTGACGACATTAAAGCCTGCCTCCAAGCGGGCGGCTTCCAAGTTGCGAACGAA GTTGCGCTATCGAATGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MGTYRAAKICPNGHVATTAADQNHELREAFCSQSGEATIIQYPKCSASIGGDDYVEGVLGFGRDYEPPTFCNNCGSRFPW AERKIAGTVELVEADANLTPDEVQQFRTDLTKLTKDSPKTQVASLRFKKVMAKVRTSVASGVRDIVVDVLSEAAKKAI
Sequences:
>Translated_158_residues MGTYRAAKICPNGHVATTAADQNHELREAFCSQSGEATIIQYPKCSASIGGDDYVEGVLGFGRDYEPPTFCNNCGSRFPW AERKIAGTVELVEADANLTPDEVQQFRTDLTKLTKDSPKTQVASLRFKKVMAKVRTSVASGVRDIVVDVLSEAAKKAI >Mature_157_residues GTYRAAKICPNGHVATTAADQNHELREAFCSQSGEATIIQYPKCSASIGGDDYVEGVLGFGRDYEPPTFCNNCGSRFPWA ERKIAGTVELVEADANLTPDEVQQFRTDLTKLTKDSPKTQVASLRFKKVMAKVRTSVASGVRDIVVDVLSEAAKKAI
Specific function: Unknown
COG id: COG4306
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17145; Mature: 17014
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTYRAAKICPNGHVATTAADQNHELREAFCSQSGEATIIQYPKCSASIGGDDYVEGVLG CCCCCCCEECCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH FGRDYEPPTFCNNCGSRFPWAERKIAGTVELVEADANLTPDEVQQFRTDLTKLTKDSPKT CCCCCCCCHHHHHCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCHH QVASLRFKKVMAKVRTSVASGVRDIVVDVLSEAAKKAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GTYRAAKICPNGHVATTAADQNHELREAFCSQSGEATIIQYPKCSASIGGDDYVEGVLG CCCCCCEECCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH FGRDYEPPTFCNNCGSRFPWAERKIAGTVELVEADANLTPDEVQQFRTDLTKLTKDSPKT CCCCCCCCHHHHHCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCHH QVASLRFKKVMAKVRTSVASGVRDIVVDVLSEAAKKAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA