Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is phoA [H]
Identifier: 182682124
GI number: 182682124
Start: 1776513
End: 1778210
Strand: Reverse
Name: phoA [H]
Synonym: XfasM23_1602
Alternate gene names: 182682124
Gene position: 1778210-1776513 (Counterclockwise)
Preceding gene: 182682127
Following gene: 182682123
Centisome position: 70.13
GC content: 57.42
Gene sequence:
>1698_bases ATGTTCCGACGTTTTTCTACTTTCCTCATTCTTCCTGTCGTGTCATTTGCCATAGCGGTTTCTTTCCCATCTGCTGCCAC TTCTACTACCCAGCTGAGCGTGCCCAAAGTGACTCCTCCTGCCGCTGAGACCCCGCAATGGTGGTATCAGAGCGGCGCTA CACGTGCTGCGGCTAACGGTGCCATGGCTGGCAAAGCCAAAAACGTCATCCTATTTCTCGGCGACGGCATGAGCTTCACC ACCGTAGCCGCTGCACGCATCCTGGAAGGCCAGCGCAACGCTGCCACTGGCGAAGAGAACGTATTGTCCTGGGAGCATTT TCCTGCCACCGCATTCAGCAAAACCTACAACACCGATGCCCAGACCGCAGACTCAGCCGGTTCCATGACCGCGATCACCT CTGGAGTAAAGACCCACAGGGGCGCGATCGGCGTCAGTGCAGGTCAGCGCAACGACTGCGTTGATAGCCTCGGCAAAAGT CTACTTACCTGGCTGACACTGGCAGACAGTGCCGGTATGGCGACCGGCATCATAACGACCACCCGTATCACTCACGCCAC CCCGGCGGCGCTCTACGCACATACCCCGGAACGTCATTGGGAAAGTGATGCCAACCTGCCTGAAGCCGCCAAAGCGGGCG GCTGCCGCGATATTGCCCAACAACTCCTCACCTCTACCCGCTATGGGCGTGGTCCTCTGGTGGTGCTGGGTGGTGGTCGC GCCCAATTCATGCCTGCGCACCAACATGACCCCGAATATGCTGAGCGTACTGGCTTACGTTTGGATGGACGCGACCTCAT TGAAGAATGGAAACGTGCACATCCCAATGGTGCTTATGTGTGGAACACCCACCAATTCAACGCTGATGCTGGCGCACCGG CCCTGCTGGGTTTATTTGAGCCCAGCCATATGCAGTTTGAACACGATCGCGACCGACACCCCAACGGCGAGCCTAGCTTG GCCGAGATGACACGTACCGCGATCCAATCGCTGTCTCGTGATCCACATGGTTTTGTACTGATGGTTGAAGGAGGCCGGAT TGATCACGCCCATCATGCCGGTAACGCCTACAGAGCCTTGGATGAAACCATCGCACTCTCAGATGCAGTACGCGCCGCCG TACAGACAGCCCCTAAAGATACCTTGATTATTGTCACTGCCGACCATGCCCATACCCTTAACTTTGTTGGCTACCCAGTC CGCGGCAACCCCATATTGGGCAAAGTGCGTAGCAGCAGCCGTGATGCAGGAGACCGCACCCAGTACGCACATGATTTAAA TGCCTTGCCCTATACCACATTGACTTACGCAAACGGTCCTGGCCACACCGCCGCCAGCAATACACAGTCGGCTGGAACCA AACACTTCAACCATCAACCCAGTACCTATGAATTAGTCCGTGGTCGCCCAGATCTGACCACGATCGACACCCAAGCGCCC GACTATCTGCAAGAAGCACTGGTCCCACTGAAGAAGGAGAGCCACAGCGGCGAAGACGTCGGCATCTGGGCCACAGGCCC CGGCAGTGCTGCGTTCCGCGGCGTCCTTGAACAACATGTCATCTACCATGTCATCGTCCAAGCGACACCCGCATTACGCC AGCGCCTGTGTGCCGCTGGCACATGTAACGCCGCTGGCGTGCCGATCAAGTTGCCACAGCTGGCCGACTTCGAACGCAAA GACCAGAGCAGGGAGTGA
Upstream 100 bases:
>100_bases ATTCGTATATGAAACCACAGTTGAACACTGTCATCTATGTGACTTTATCGTCTGTTAATAATGAATGCGTTTCTCAATTT GTCGACCATCAAATCACATT
Downstream 100 bases:
>100_bases ACCACTCCCACCATGCCTCCCTGATGTACACCATGCGTATCCTGAGCAGCCTTGGACCCACAAAATGCCTGATTGCTCAC TCCAAGAGTGTCCGTATCGC
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MFRRFSTFLILPVVSFAIAVSFPSAATSTTQLSVPKVTPPAAETPQWWYQSGATRAAANGAMAGKAKNVILFLGDGMSFT TVAAARILEGQRNAATGEENVLSWEHFPATAFSKTYNTDAQTADSAGSMTAITSGVKTHRGAIGVSAGQRNDCVDSLGKS LLTWLTLADSAGMATGIITTTRITHATPAALYAHTPERHWESDANLPEAAKAGGCRDIAQQLLTSTRYGRGPLVVLGGGR AQFMPAHQHDPEYAERTGLRLDGRDLIEEWKRAHPNGAYVWNTHQFNADAGAPALLGLFEPSHMQFEHDRDRHPNGEPSL AEMTRTAIQSLSRDPHGFVLMVEGGRIDHAHHAGNAYRALDETIALSDAVRAAVQTAPKDTLIIVTADHAHTLNFVGYPV RGNPILGKVRSSSRDAGDRTQYAHDLNALPYTTLTYANGPGHTAASNTQSAGTKHFNHQPSTYELVRGRPDLTTIDTQAP DYLQEALVPLKKESHSGEDVGIWATGPGSAAFRGVLEQHVIYHVIVQATPALRQRLCAAGTCNAAGVPIKLPQLADFERK DQSRE
Sequences:
>Translated_565_residues MFRRFSTFLILPVVSFAIAVSFPSAATSTTQLSVPKVTPPAAETPQWWYQSGATRAAANGAMAGKAKNVILFLGDGMSFT TVAAARILEGQRNAATGEENVLSWEHFPATAFSKTYNTDAQTADSAGSMTAITSGVKTHRGAIGVSAGQRNDCVDSLGKS LLTWLTLADSAGMATGIITTTRITHATPAALYAHTPERHWESDANLPEAAKAGGCRDIAQQLLTSTRYGRGPLVVLGGGR AQFMPAHQHDPEYAERTGLRLDGRDLIEEWKRAHPNGAYVWNTHQFNADAGAPALLGLFEPSHMQFEHDRDRHPNGEPSL AEMTRTAIQSLSRDPHGFVLMVEGGRIDHAHHAGNAYRALDETIALSDAVRAAVQTAPKDTLIIVTADHAHTLNFVGYPV RGNPILGKVRSSSRDAGDRTQYAHDLNALPYTTLTYANGPGHTAASNTQSAGTKHFNHQPSTYELVRGRPDLTTIDTQAP DYLQEALVPLKKESHSGEDVGIWATGPGSAAFRGVLEQHVIYHVIVQATPALRQRLCAAGTCNAAGVPIKLPQLADFERK DQSRE >Mature_565_residues MFRRFSTFLILPVVSFAIAVSFPSAATSTTQLSVPKVTPPAAETPQWWYQSGATRAAANGAMAGKAKNVILFLGDGMSFT TVAAARILEGQRNAATGEENVLSWEHFPATAFSKTYNTDAQTADSAGSMTAITSGVKTHRGAIGVSAGQRNDCVDSLGKS LLTWLTLADSAGMATGIITTTRITHATPAALYAHTPERHWESDANLPEAAKAGGCRDIAQQLLTSTRYGRGPLVVLGGGR AQFMPAHQHDPEYAERTGLRLDGRDLIEEWKRAHPNGAYVWNTHQFNADAGAPALLGLFEPSHMQFEHDRDRHPNGEPSL AEMTRTAIQSLSRDPHGFVLMVEGGRIDHAHHAGNAYRALDETIALSDAVRAAVQTAPKDTLIIVTADHAHTLNFVGYPV RGNPILGKVRSSSRDAGDRTQYAHDLNALPYTTLTYANGPGHTAASNTQSAGTKHFNHQPSTYELVRGRPDLTTIDTQAP DYLQEALVPLKKESHSGEDVGIWATGPGSAAFRGVLEQHVIYHVIVQATPALRQRLCAAGTCNAAGVPIKLPQLADFERK DQSRE
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266292, Length=505, Percent_Identity=41.980198019802, Blast_Score=373, Evalue=1e-103, Organism=Homo sapiens, GI157266296, Length=524, Percent_Identity=40.6488549618321, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI94721246, Length=524, Percent_Identity=40.6488549618321, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI116734717, Length=535, Percent_Identity=39.0654205607477, Blast_Score=343, Evalue=3e-94, Organism=Homo sapiens, GI294660770, Length=469, Percent_Identity=41.36460554371, Blast_Score=333, Evalue=4e-91, Organism=Homo sapiens, GI294660772, Length=437, Percent_Identity=39.1304347826087, Blast_Score=291, Evalue=1e-78, Organism=Escherichia coli, GI48994877, Length=359, Percent_Identity=32.8690807799443, Blast_Score=127, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320689, Length=355, Percent_Identity=33.5211267605634, Blast_Score=139, Evalue=2e-33, Organism=Drosophila melanogaster, GI21358067, Length=469, Percent_Identity=42.4307036247335, Blast_Score=319, Evalue=3e-87, Organism=Drosophila melanogaster, GI85725200, Length=487, Percent_Identity=40.041067761807, Blast_Score=310, Evalue=2e-84, Organism=Drosophila melanogaster, GI85815833, Length=487, Percent_Identity=40.041067761807, Blast_Score=310, Evalue=2e-84, Organism=Drosophila melanogaster, GI24657835, Length=514, Percent_Identity=38.9105058365759, Blast_Score=303, Evalue=3e-82, Organism=Drosophila melanogaster, GI21355149, Length=468, Percent_Identity=40.1709401709402, Blast_Score=301, Evalue=1e-81, Organism=Drosophila melanogaster, GI24657842, Length=513, Percent_Identity=38.5964912280702, Blast_Score=296, Evalue=2e-80, Organism=Drosophila melanogaster, GI21355151, Length=481, Percent_Identity=41.3721413721414, Blast_Score=296, Evalue=3e-80, Organism=Drosophila melanogaster, GI21355981, Length=562, Percent_Identity=36.8327402135231, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI24651554, Length=534, Percent_Identity=38.2022471910112, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI24585213, Length=572, Percent_Identity=36.1888111888112, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI24657827, Length=505, Percent_Identity=38.8118811881188, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI19921912, Length=572, Percent_Identity=36.8881118881119, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI18859923, Length=538, Percent_Identity=35.6877323420074, Blast_Score=277, Evalue=2e-74, Organism=Drosophila melanogaster, GI24651556, Length=478, Percent_Identity=39.1213389121339, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI24645593, Length=319, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 60738; Mature: 60738
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRFSTFLILPVVSFAIAVSFPSAATSTTQLSVPKVTPPAAETPQWWYQSGATRAAANG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCHHHCCC AMAGKAKNVILFLGDGMSFTTVAAARILEGQRNAATGEENVLSWEHFPATAFSKTYNTDA CCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHCCCCCC QTADSAGSMTAITSGVKTHRGAIGVSAGQRNDCVDSLGKSLLTWLTLADSAGMATGIITT CCCCCCCCHHHHHHCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE TRITHATPAALYAHTPERHWESDANLPEAAKAGGCRDIAQQLLTSTRYGRGPLVVLGGGR EEECCCCCHHEEECCCHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCC AQFMPAHQHDPEYAERTGLRLDGRDLIEEWKRAHPNGAYVWNTHQFNADAGAPALLGLFE EEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECEEECCCCCCCCEEEECC PSHMQFEHDRDRHPNGEPSLAEMTRTAIQSLSRDPHGFVLMVEGGRIDHAHHAGNAYRAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHHHHH DETIALSDAVRAAVQTAPKDTLIIVTADHAHTLNFVGYPVRGNPILGKVRSSSRDAGDRT HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCCHH QYAHDLNALPYTTLTYANGPGHTAASNTQSAGTKHFNHQPSTYELVRGRPDLTTIDTQAP HHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCH DYLQEALVPLKKESHSGEDVGIWATGPGSAAFRGVLEQHVIYHVIVQATPALRQRLCAAG HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC TCNAAGVPIKLPQLADFERKDQSRE CCCCCCCCEECCCCCCCHHHCCCCC >Mature Secondary Structure MFRRFSTFLILPVVSFAIAVSFPSAATSTTQLSVPKVTPPAAETPQWWYQSGATRAAANG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCHHHCCC AMAGKAKNVILFLGDGMSFTTVAAARILEGQRNAATGEENVLSWEHFPATAFSKTYNTDA CCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHCCCCCC QTADSAGSMTAITSGVKTHRGAIGVSAGQRNDCVDSLGKSLLTWLTLADSAGMATGIITT CCCCCCCCHHHHHHCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE TRITHATPAALYAHTPERHWESDANLPEAAKAGGCRDIAQQLLTSTRYGRGPLVVLGGGR EEECCCCCHHEEECCCHHHCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCC AQFMPAHQHDPEYAERTGLRLDGRDLIEEWKRAHPNGAYVWNTHQFNADAGAPALLGLFE EEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECEEECCCCCCCCEEEECC PSHMQFEHDRDRHPNGEPSLAEMTRTAIQSLSRDPHGFVLMVEGGRIDHAHHAGNAYRAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHHHHH DETIALSDAVRAAVQTAPKDTLIIVTADHAHTLNFVGYPVRGNPILGKVRSSSRDAGDRT HHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCEEEECCCCCCCCCCHH QYAHDLNALPYTTLTYANGPGHTAASNTQSAGTKHFNHQPSTYELVRGRPDLTTIDTQAP HHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCH DYLQEALVPLKKESHSGEDVGIWATGPGSAAFRGVLEQHVIYHVIVQATPALRQRLCAAG HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC TCNAAGVPIKLPQLADFERKDQSRE CCCCCCCCEECCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]